Mickael Silva

INNUENDO: A cross‐sectoral platform for the integration of genomics in the surveillance of food‐borne pathogens

Diogo N. Silva, João André Carriço, J. Lundén, 2018, EFSA Supporting Publications.

Genome-wide identification of geographical segregated genetic markers in Salmonella enterica serovar Typhimurium variant 4,[5],12:i:-

Eduardo N. Taboada, E. Taboada, G. Manfreda, 2018, Scientific Reports.

Epidemiological Surveillance and Typing Methods to Track Antibiotic Resistant Strains Using High Throughput Sequencing.

Mickael Silva, Mário Ramirez, Bruno Ribeiro-Gonçalves, 2017, Methods in molecular biology.

Chewie Nomenclature Server (chewie-NS): a deployable nomenclature server for easy sharing of core and whole genome MLST schemas

Mickael Silva, Mário Ramirez, João A Carriço, 2020, Nucleic Acids Res..

chewBBACA: A complete suite for gene-by-gene schema creation and strain identification

Mirko Rossi, Mickael Silva, Mario Ramirez, 2017, bioRxiv.

Genome-wide identification of geographical segregated genetic markers in Salmonella enterica serovar Typhimurium variant 4,[5],12:i:-

E. Taboada, G. Manfreda, Mickael Silva, 2018, Scientific Reports.

chewBBACA: A complete suite for gene-by-gene schema creation and strain identification

Diogo N. Silva, M. Ramirez, J. A. Carriço, 2017, bioRxiv.

TypOn: the microbial typing ontology

Keith A. Jolley, James E. Bray, Alexandre P. Francisco, 2014, Journal of Biomedical Semantics.