Ye Ding

发表

Identification of bacterial sRNA regulatory targets using ribosome profiling

Jing Wang, William A. Rennie, Chaochun Liu, 2015, Nucleic acids research.

The imprinted H19 lncRNA antagonizes let-7 microRNAs.

Chaochun Liu, Wang Min, Jing Ma, 2013, Molecular cell.

Ab initio identification of functionally interacting pairs of cis-regulatory elements.

Noam Shomron, Michael B. Stadler, Michael B Stadler, 2008, Genome research.

Novel determinants of mammalian primary microRNA processing revealed by systematic evaluation of hairpin-containing transcripts and human genetic variation.

Jun Liu, William A. Rennie, Shaveta Kanoria, 2017, Genome research.

RNA Interference Technology: Rational design of siRNAs with the Sfold software

Ye Ding, Ye Ding, Charles E. Lawrence, 2005 .

Characterization of the mammalian miRNA turnover landscape

Jun Liu, Jun Lu, Ye Ding, 2015, Nucleic acids research.

Effect of target secondary structure on RNAi efficiency.

Chi Yu Chan, Anil Maliyekkel, Charles E Lawrence, 2007, RNA.

mirWIP: microRNA Target Prediction Based on miRNP Enriched Transcripts

Min Han, C. Steven Carmack, Dang D. Long, 2011 .

Boltzmann ensemble features of RNA secondary structures: a comparative analysis of biological RNA sequences and random shuffles

Chi Yu Chan, C. Chan, Ye Ding, 2007, Journal of mathematical biology.

MicroRNA binding sites in C. elegans 3′ UTRs

William A. Rennie, Chaochun Liu, Adam Wolenc, 2014, RNA biology.

Rational design and rapid screening of antisense oligonucleotides for prokaryotic gene modulation

Chi Yu Chan, C. Chan, Ye Ding, 2006, Nucleic acids research.

Single-cell microRNA-mRNA co-sequencing reveals non-genetic heterogeneity and mechanisms of microRNA regulation

Burak Dura, Yang Liu, Miaomiao Zhang, 2019, Nature Communications.