H. Fernandes

发表

Multi-Institutional Evaluation of Inter-rater Agreement of Variant Classification Based on the 2017 AMP, ASCO and CAP Standards and Guidelines for the Interpretation and Reporting of Sequence Variants in Cancer.

Robert L Schmidt, Dara L Aisner, Susan J Hsiao, 2019, The Journal of molecular diagnostics : JMD.

Microsatellite instability detection using a large next-generation sequencing cancer panel across diverse tumour types

M. Mansukhani, S. Hsiao, J. Pang, 2019, Journal of Clinical Pathology.

Accuracy of next‐generation sequencing for the identification of clinically relevant variants in cytology smears in lung adenocarcinoma

N. Narula, H. Rennert, H. Fernandes, 2017, Cancer cytopathology.

Targeting SLMAP-ALK—a novel gene fusion in lung adenocarcinoma

A. Saqi, M. Mansukhani, V. Murty, 2019, Cold Spring Harbor molecular case studies.

Performance Characteristics of a Targeted Sequencing Platform for Simultaneous Detection of Single Nucleotide Variants, Insertions/Deletions, Copy Number Alterations, and Gene Fusions in Cancer Genome.

M. Rubin, O. Elemento, A. Borczuk, 2020, Archives of pathology & laboratory medicine.

Pan-tumor screening for NTRK gene fusions using pan-TRK immunohistochemistry and RNA NGS fusion panel testing

M. Mansukhani, S. Hsiao, H. Fernandes, 2022, Cancer Genetics.

Colonic Mucosa With Polypoid Hyperplasia.

J. Jessurun, E. Hissong, H. Fernandes, 2019, American journal of clinical pathology.

Development of a BK virus real-time quantitative assay using the bioMérieux analyte-specific reagents in plasma specimens.

J. Sipley, H. Rennert, H. Fernandes, 2015, American journal of clinical pathology.

Use of Biosynthetic Controls as Performance Standards for Next-Generation Sequencing Assays of Somatic Tumors: A Multilaboratory Study.

Bharathi Anekella, Helen Fernandes, Andrea Ferreira-Gonzalez, 2017, The journal of applied laboratory medicine.

Development and validation of a whole-exome sequencing test for simultaneous detection of point mutations, indels and copy-number alterations for precision cancer care

Alessandro Romanel, Francesca Demichelis, Tuo Zhang, 2016, npj Genomic Medicine.

Clinical Characteristics and Molecular Profiles of Lung Cancer in Ethiopia

P. Massion, A. Saqi, N. Schluger, 2021, JTO clinical and research reports.

Synchronous Pulmonary Adenocarcinomas.

J. Heymann, A. Saqi, J. Crapanzano, 2020, American journal of clinical pathology.

Benign metastasizing leiomyoma presenting with miliary pattern and fatal outcome: Case report with molecular analysis & review of the literature

A. Saqi, T. Colby, M. Cummings, 2019, Respiratory medicine case reports.

Multi-Institutional Evaluation of Interrater Agreement of Variant Classification Based on the 2017 Association for Molecular Pathology, American Society of Clinical Oncology, and College of American Pathologists Standards and Guidelines for the Interpretation and Reporting of Sequence Variants in Ca

Larissa V Furtado, Lauren L. Ritterhouse, S. Murray, 2020 .

The cancer precision medicine knowledge base for structured clinical-grade mutations and interpretations

Marcin Imielinski, Olivier Elemento, Mark A. Rubin, 2016, J. Am. Medical Informatics Assoc..

Clinical Utilization, Utility, and Reimbursement for Expanded Genomic Panel Testing in Adult Oncology

M. Mansukhani, G. Schwartz, K. Roth, 2020 .

Next‐generation sequencing of residual cytologic fixative preserved DNA from pancreatic lesions: A pilot study

R. Yantiss, M. Pittman, A. Borczuk, 2020, Cancer Cytopathology.

Efficacy of DNA versus RNA NGS-based Methods in MET Exon 14 skipping mutation detection.

A. Saqi, M. Mansukhani, H. Fernandes, 2020 .

Detection of STRN‐ALK fusion in thyroid nodules with indeterminate cytopathology facilitates papillary thyroid cancer diagnosis

V. Murty, S. Hsiao, A. Cimic, 2020, Diagnostic cytopathology.

ALK Gene Rearrangements in Lung Adenocarcinomas: Concordance of IHC, FISH, RNA ISH, and RNA NGS Testing

A. Saqi, J. Crapanzano, M. Mansukhani, 2021 .

Utility of Genomic Analysis in Differentiating Synchronous and Metachronous Lung Adenocarcinomas from Primary Adenocarcinomas with Intrapulmonary Metastasis12

N. Narula, M. Kluk, S. Mathew, 2017, Translational oncology.

Gastric Carcinomas With Lymphoid Stroma: An Evaluation of the Histopathologic and Molecular Features

R. Yantiss, D. Klimstra, J. Shia, 2018, The American journal of surgical pathology.

Plasma‐thrombin cell blocks: Potential source of DNA contamination

A. Saqi, Simon Sung, H. Remotti, 2019, Cancer cytopathology.

Investigation of Discrepant MMR IHC and MSI PCR Test Results for Gynecologic Cancers using Next Generation Sequencing.

M. Mansukhani, M. Smithgall, H. Remotti, 2021, Human pathology.

ALK Gene Rearrangements in Lung Adenocarcinomas: Concordance of Immunohistochemistry, Fluorescence In Situ Hybridization, RNA In Situ Hybridization, and RNA Next-Generation Sequencing Testing

A. Saqi, J. Crapanzano, M. Mansukhani, 2021, JTO clinical and research reports.

Quality metrics for enhanced performance of an NGS panel using single-vial amplification technology

M. Mansukhani, S. Hsiao, H. Fernandes, 2022, Journal of clinical pathology.

Key considerations for comprehensive validation of an RNA fusion NGS panel

M. Mansukhani, S. Hsiao, H. Fernandes, 2020, Practical laboratory medicine.

The Precision Medicine Knowledge Base: an online application for collaborative editing, maintenance and sharing of structured clinical-grade cancer mutations interpretations

Marcin Imielinski, Olivier Elemento, Mark A. Rubin, 2016, bioRxiv.

Benchmarking bioinformatics approaches for tumour mutational burden evaluation from a large cancer panel against whole-exome sequencing

Shijun Mi, Hong’ai Xia, M. Mansukhani, 2022, Journal of Clinical Pathology.