Zhenqing Ye

发表

CpGtools: a python package for DNA methylation analysis

Ting Wei, Jinfu Nie, Nicholas B Larson, 2019, Bioinform..

CircularLogo: A lightweight web application to visualize intra-motif dependencies

Tao Ma, Jean-Pierre A. Kocher, Liguo Wang, 2017, BMC Bioinformatics.

Genome wide approaches to identify protein-DNA interactions.

Zhenqing Ye, Liguo Wang, Tao Ma, 2020, Current medicinal chemistry.

Computational analysis reveals a correlation of exon-skipping events with splicing, transcription and epigenetic factors

Victor X. Jin, Zhenqing Ye, Laura Elnitski, 2013, Nucleic acids research.

Genome-wide analysis reveals positional-nucleosome-oriented binding pattern of pioneer factor FOXA1

Victor X. Jin, Zhenqing Ye, Seth Frietze, 2016, Nucleic acids research.

Integration of Hi-C and ChIP-seq data reveals distinct types of chromatin linkages

Emery H. Bresnick, Victor X. Jin, Peggy J. Farnham, 2012, Nucleic acids research.

Cell type-specific binding patterns reveal that TCF7L2 can be tethered to the genome by association with GATA3

Zhenqing Ye, Victor X Jin, Lijing Yao, 2012, Genome Biology.

Genome-wide DNA methylation analysis reveals estrogen-mediated epigenetic repression of metallothionein-1 gene cluster in breast cancer

Tim Hui-Ming Huang, Zhenqing Ye, Victor X Jin, 2015, Clinical Epigenetics.

Computational Methods and Correlation of Exon-skipping Events with Splicing, Transcription, and Epigenetic Factors.

Huidong Shi, Zhenqing Ye, Victor X Jin, 2017, Methods in molecular biology.