Shanika Kuruppu

Reference Sequence Construction for Relative Compression of Genomes

Justin Zobel, Simon J. Puglisi, Shanika Kuruppu, 2011, SPIRE.

Compression of large DNA databases

Shanika Kuruppu, Shanika Kuruppu, 2012 .

Optimized Relative Lempel-Ziv Compression of Genomes

Justin Zobel, Simon J. Puglisi, Shanika Kuruppu, 2011, ACSC.

Relative Lempel-Ziv Compression of Genomes for Large-Scale Storage and Retrieval

Justin Zobel, Simon J. Puglisi, Shanika Kuruppu, 2010, SPIRE.

Iterative Dictionary Construction for Compression of Large DNA Data Sets

Justin Zobel, Thomas C. Conway, Shanika Kuruppu, 2012, IEEE/ACM Transactions on Computational Biology and Bioinformatics.