Yvonne M. Bradford

发表

Model organism data evolving in support of translational medicine

Judith A. Blake, Stacia R. Engel, Joel E. Richardson, 2018, Lab Animal.

The zebrafish anatomy and stage ontologies: representing the anatomy and development of Danio rerio

Monte Westerfield, Melissa Haendel, Yvonne M. Bradford, 2014, Journal of Biomedical Semantics.

The Zebrafish Experimental Conditions Ontology Systemizing Experimental Descriptions in ZFIN

Sridhar Ramachandran, Yvonne M. Bradford, Ceri E. Van Slyke, 2016, ICBO/BioCreative.

ZFIN, the Zebrafish Model Organism Database: increased support for mutants and transgenics

Monte Westerfield, Jonathan Knight, Sridhar Ramachandran, 2012, Nucleic Acids Res..

ZFIN: enhancements and updates to the zebrafish model organism database

Monte Westerfield, Jonathan Knight, Sridhar Ramachandran, 2010, Nucleic Acids Res..

The Cell Ontology 2016: enhanced content, modularization, and ontology interoperability

Alan Ruttenberg, Alexander D. Diehl, Judith A. Blake, 2016, J. Biomed. Semant..

The Zebrafish Information Network: new support for non-coding genes, richer Gene Ontology annotations and the Alliance of Genome Resources

Monte Westerfield, Sridhar Ramachandran, Patrick Kalita, 2018, Nucleic Acids Res..

The Zebrafish Model Organism Database: new support for human disease models, mutation details, gene expression phenotypes and searching

Monte Westerfield, Sridhar Ramachandran, Patrick Kalita, 2016, Nucleic Acids Res..

Ontologies in the Fish Tank: Using the Zebrafish Anatomy Ontology with Other OBO Ontologies to Annotate Expression and Phenotype

Yvonne M. Bradford, Ceri E. Van Slyke, Y. Bradford, 2011, ICBO.

Phenotype Ontologies Traversing All The Organisms (POTATO) workshop aims to reconcile logical definitions across species. Workshop Report

Melissa Haendel, Anne E. Thessen, James P. Balhoff, 2018 .

Unification of multi-species vertebrate anatomy ontologies for comparative biology in Uberon

Judith A. Blake, Chris Mungall, Melissa Haendel, 2014, Journal of Biomedical Semantics.

Phenotype Ontologies Traversing All the Organisms (POTATO) workshop: 2nd edition.

James P. Balhoff, Nicolas Matentzoglu, M-A. Laporte, 2019 .

Growth of the Zebrafish Anatomy Ontology: Expanded to Support Adult Morphology and Dynamic Changes in the Early Embryo

Yvonne M. Bradford, Ceri E. Van Slyke, Christian Pich, 2016, ICBO/BioCreative.

The Zebrafish Information Network: major gene page and home page updates

Monte Westerfield, Sridhar Ramachandran, Patrick Kalita, 2021, Nucleic Acids Res..

Expanding and enriching the representation of alleles in the alliance of genome resources

Yvonne M. Bradford, Susan M. Bello, Cynthia L. Smith, 2021 .

Alliance of Genome Resources Portal: unified model organism research platform

Anushya Muruganujan, Kimberly Van Auken, Juancarlos Chan, 2019, Nucleic Acids Res..

Data extraction, transformation, and dissemination through ZFIN.

Monte Westerfield, Sridhar Ramachandran, Yvonne M. Bradford, 2011, Methods in cell biology.

The zebrafish anatomy and stage ontologies: representing the anatomy and development of Danio rerio

Yvonne M. Bradford, Ceri E. Van Slyke, M. Westerfield, 2014, J. Biomed. Semant..

uPheno 2: Framework for standardised representation of phenotypes across species

Yvonne M. Bradford, Christian A. Grove, Sofia M. C. Robb, 2019 .

ZFIN, The zebrafish model organism database: Updates and new directions

Yvonne M. Bradford, Anne E. Eagle, M. Westerfield, 2015, Genesis.

Updates to the Alliance of Genome Resources Central Infrastructure Alliance of Genome Resources Consortium

Adam J. Wright, Troy J. Pells, Steven J. Marygold, 2023, bioRxiv.

Rothamsted Repository Download

Zoe May Pendlington, Julius O. B. Jacobsen, Matthew H. Brush, 2022 .

Zebrafish Models of Human Disease: Gaining Insight into Human Disease at ZFIN

Yvonne M. Bradford, Anne E. Eagle, M. Westerfield, 2017, ILAR journal.

Harmonizing model organism data in the Alliance of Genome Resources

Adam J. Wright, Steven J. Marygold, Yvonne M. Bradford, 2022, Genetics.

The Cell Ontology 2016: enhanced content, modularization, and ontology interoperability

Matthew H. Brush, Yvonne M. Bradford, Ceri E. Van Slyke, 2016, Journal of Biomedical Semantics.

The Zebrafish Information Network: the zebrafish model organism database provides expanded support for genotypes and phenotypes

Yvonne M. Bradford, Ceri E. Van Slyke, M. Westerfield, 2007, Nucleic Acids Res..

From multiallele fish to nonstandard environments, how ZFIN assigns phenotypes, human disease models, and gene expression annotations to genes

Yvonne M. Bradford, M. Westerfield, A. Singer, 2022, bioRxiv.

Zebrafish information network, the knowledgebase for Danio rerio research

Yvonne M. Bradford, Anne E. Eagle, M. Westerfield, 2021, bioRxiv.

Using ZFIN: Data Types, Organization, and Retrieval.

Sridhar Ramachandran, Yvonne M. Bradford, Leyla Ruzicka, 2018, Methods in molecular biology.