Zhe Ji

Alternative to the soft-agar assay that permits high-throughput drug and genetic screens for cellular transformation

Kevin Struhl, John G. Doench, Asaf Rotem, 2015, Proceedings of the National Academy of Sciences.

Genome-wide identification and differential analysis of translational initiation

Tao Liu, Lin Tan, Jian Hu, 2017, Nature Communications.

Transcriptome-scale RNase-footprinting of RNA-protein complexes

Kevin Struhl, Aviv Regev, Hailiang Huang, 2015, Nature Biotechnology.

Genome-scale identification of transcription factors that mediate an inflammatory network during breast cellular transformation

Kevin Struhl, Aviv Regev, Asaf Rotem, 2018, Nature Communications.

Comprehensive comparative analysis of 5’ end RNA sequencing methods

Aviv Regev, Jen Q. Pan, Xian Adiconis, 2018, Nature Methods.

RibORF: Identifying Genome‐Wide Translated Open Reading Frames Using Ribosome Profiling

Zhe Ji, Zhe Ji, 2018, Current protocols in molecular biology.