E. Carbonnelle

Y. Yazdanpanah, C. Londner, B. Fantin, 2021, International journal of infectious diseases : IJID : official publication of the International Society for Infectious Diseases.

Performances of bioinformatics tools for the analysis of sequencing data of Mycobacterium tuberculosis complex strains

Julie Marin, L. De Pontual, E. Carbonnelle, 2022, bioRxiv.

Pulmonary tuberculosis: Evaluation of current diagnostic strategy.

H. LeBoité, F. Mechaï, E. Carbonnelle, 2020, Medecine et maladies infectieuses.

Characterization of a novel HLA-Cw*04 variant in a Laotian family: HLA-Cw*0406.

A. Toubert, R. Tamouza, D. Charron, 1999, Tissue antigens.

Impact of freeze/thaw cycles and single freezing at -80 °C on the viability of aerobic bacteria from rectal swabs performed with the ESwabTM system.

J. Zahar, M. Lescat, E. Carbonnelle, 2019, Diagnostic microbiology and infectious disease.

A novel HLA-B*39 allele (HLA-B*3916) due to a rare mutation causing cryptic splice site activation.

A. Toubert, R. Tamouza, D. Charron, 2000, Human immunology.

Microbiological diagnosis of empyema in children: comparative evaluations by culture, polymerase chain reaction, and pneumococcal antigen detection in pleural fluids.

P. Berche, E. Abachin, J. Zahar, 2006, Clinical infectious diseases : an official publication of the Infectious Diseases Society of America.

Tuberculosis treatment outcomes among precarious patients in france.

Y. Yazdanpanah, F. Mechaï, N. Vignier, 2022, Infectious diseases now.

MALDI-TOF MS contribution to diagnosis of melioidosis in a nonendemic country in three French travellers

B. Picard, F. Mechaï, E. Carbonnelle, 2016, new microbes and new infections.

Infections caused by naturally AmpC-producing Enterobacteriaceae: can we use third generation cephalosporins? A narrative review.

J. Zahar, B. Pilmis, A. Mizrahi, 2020, International journal of antimicrobial agents.

Environmental contamination related to SARS-CoV-2 in ICU patients

M. Boubaya, J. Zahar, Y. Cohen, 2020, ERJ Open Research.

Carbapenemase-producing Bacteria in Patients Hospitalized Abroad, France

F. Compain, I. Podglajen, M. Lavollay, 2014, Emerging infectious diseases.

Feedback From Medical and Biology Students on Distance Learning: Focus on a Useful Interactive Software, Wooclap®

M. Lescat, E. Carbonnelle, H. Lécuyer, 2021, Journal of Educational Technology Systems.

Severity of Escherichia coli bacteraemia is independent of the intrinsic virulence of the strains assessed in a mouse model.

E. Denamur, L. Landraud, O. Clermont, 2013, Clinical microbiology and infection : the official publication of the European Society of Clinical Microbiology and Infectious Diseases.

Host and bacterial determinants of initial severity and outcome of Escherichia coli sepsis.

C. Clec’h, X. Nassif, E. Bingen, 2007, Clinical microbiology and infection : the official publication of the European Society of Clinical Microbiology and Infectious Diseases.

Contact with host cells induces a DNA repair system in pathogenic Neisseriae

I. Matic, X. Nassif, S. Morelle, 2004, Molecular microbiology.

Diagnosis in France of a Non-Toxigenic tox Gene-Bearing Strain of Corynebacterium diphtheriae in a Young Male Back From Senegal

S. Brisse, E. Badell-Ocando, E. Carbonnelle, 2017, Open forum infectious diseases.

A novel HLA-B*51 allele (B*5116) identified by nucleotide sequencing.

A. Toubert, R. Tamouza, D. Charron, 2000, Tissue antigens.

Culture-Negative Pericarditis Caused by Neisseria meningitidis Serogroup C

P. Berche, X. Nassif, K. Moumile, 2004, Journal of Clinical Microbiology.

Automated HPLC-MS/MS assay for the simultaneous determination of ten plasma antibiotic concentrations.

J. Zahar, F. Mechaï, E. Carbonnelle, 2022, Journal of chromatography. B, Analytical technologies in the biomedical and life sciences.

Propionibacterium acnes endocarditis in an adolescent boy suffering from a congenital cardiopathy.

X. Nassif, O. Lortholary, A. Hot, 2007, The Pediatric infectious disease journal.

Fusobacterium necrophorum Middle Ear Infections in Children and Related Complications: Report of 25 Cases and Literature Review

P. Berche, J. Zahar, A. Le Monnier, 2008, The Pediatric infectious disease journal.

Clinical Failure and Emergence of Resistance during Third Generation Cephalosporin Therapy for Enterobacter spp. Infection: Is the Risk Overestimated? A Prospective Multicentric Study

S. Kernéis, J. Zahar, B. Pilmis, 2021, Hygiene.

Identification of clinical coagulase-negative staphylococci, isolated in microbiology laboratories, by matrix-assisted laser desorption/ionization-time of flight mass spectrometry and two automated systems.

X. Nassif, E. Bille, J. Herrmann, 2010, Clinical microbiology and infection : the official publication of the European Society of Clinical Microbiology and Infectious Diseases.

Matrix-Assisted Laser Desorption Ionization-Time of Flight Mass Spectrometry for Identification of Nonfermenting Gram-Negative Bacilli Isolated from Cystic Fibrosis Patients

P. Berche, X. Nassif, I. Sermet-Gaudelus, 2008, Journal of Clinical Microbiology.

Rapid Identification of Staphylococci Isolated in Clinical Microbiology Laboratories by Matrix-Assisted Laser Desorption Ionization-Time of Flight Mass Spectrometry

P. Berche, X. Nassif, A. Ferroni, 2007, Journal of Clinical Microbiology.

Evaluation of the Andromas Matrix-Assisted Laser Desorption Ionization–Time of Flight Mass Spectrometry System for Identification of Aerobically Growing Gram-Positive Bacilli

E Bille, C. Vay, S. Vimont, 2012, Journal of Clinical Microbiology.

Stenotrophomonas maltophilia--the most worrisome threat among unusual non-fermentative gram-negative bacilli from hospitalized patients: a prospective multicenter study.

H. Jacquier, E. Bille, J. Zahar, 2012, The Journal of infection.

[Laboratory diagnosis of bacterial meningitis: usefulness of various tests for the determination of the etiological agent].

E. Carbonnelle, 2009, Medecine et maladies infectieuses.

Comparative Genomics Identifies the Genetic Islands That Distinguish Neisseria meningitidis, the Agent of Cerebrospinal Meningitis, from Other Neisseria Species

P. Dessen, X. Nassif, Agnès Perrin, 2002, Infection and Immunity.

Mortality in Escherichia coli bloodstream infections: antibiotic resistance still does not make it.

E. Denamur, O. Clermont, M. Esposito‐Farèse, 2020, The Journal of antimicrobial chemotherapy.

When and How to Use MIC in Clinical Practice?

J. Zahar, E. Carbonnelle, F. Jauréguy, 2022, Antibiotics.

Impact of Mycobacterium ulcerans Biofilm on Transmissibility to Ecological Niches and Buruli Ulcer Pathogenesis

Pierre Legras, Priscille Brodin, Etienne Carbonnelle, 2007, PLoS pathogens.

Factors essential for L,D-transpeptidase-mediated peptidoglycan cross-linking and β-lactam resistance in Escherichia coli

L. Rice, Y. Brun, D. Mengin-Lecreulx, 2016, eLife.

Assessment of blood enterovirus PCR testing in paediatric populations with fever without source, sepsis-like disease, or suspected meningitis: a prospective, multicentre, observational cohort study

R. Epaud, L. Titomanlio, F. Rozenberg, 2018, The Lancet Infectious Diseases.

A systematic genetic analysis in Neisseria meningitidis defines the Pil proteins required for assembly, functionality, stabilization and export of type IV pili

Etienne Carbonnelle, X. Nassif, Sophie Helaine, 2006, Molecular microbiology.

Elective distribution of resistance to beta-lactams among Enterobacter cloacae genetic clusters.

H. Jacquier, S. Kernéis, S. Garinet, 2018, The Journal of infection.

Klebsiella pneumoniae and Klebsiella oxytoca meningitis in infants. Epidemiological and clinical features.

R. Cohen, M. Lorrot, L. De Pontual, 2019, Archives de pediatrie : organe officiel de la Societe francaise de pediatrie.

SARS-CoV-2 was already spreading in France in late December 2019

J. Zahar, Y. Cohen, C. Alloui, 2020, International Journal of Antimicrobial Agents.

Escherichia

E. Denamur, L. Landraud, O. Clermont, 2020, Definitions.

Phylogroup stability contrasts with high within sequence type complex dynamics of Escherichia coli bloodstream infection isolates over a 12-year period

E. Denamur, F. Tubach, X. Panhard, 2021, Genome medicine.

The REP2 Repeats of the Genome of Neisseria meningitidis Are Associated with Genes Coordinately Regulated during Bacterial Cell Interaction

X. Nassif, S. Morelle, E. Carbonnelle, 2003, Journal of bacteriology.

A novel HLA-B null allele (B*4022N) generated by a nonsense codon in the alpha1 domain.

A. Toubert, R. Tamouza, D. Charron, 2000, Tissue antigens.

Mechanisms of meningeal invasion by a bacterial extracellular pathogen, the example of Neisseria meningitidis

S. Bourdoulous, X. Nassif, E. Bille, 2010, Progress in Neurobiology.

Cefoxitin as a carbapenem-sparing antibiotic for infections caused by extended-spectrum beta-lactamase-producing Escherichia coli and Klebsiella pneumoniae

S. Kernéis, G. Geri, J. Mainardi, 2015, Infectious diseases.

Comparison of Five Media for Detection of Extended-Spectrum Beta-Lactamase by Use of the Wasp Instrument for Automated Specimen Processing

A. Caumont-Prim, L. Gutmann, I. Podglajen, 2013, Journal of Clinical Microbiology.

The potential role of microbiota for controlling the spread of extended-spectrum beta-lactamase-producing Enterobacteriaceae (ESBL-PE) in neonatal population

J. Zahar, L. De Pontual, E. Carbonnelle, 2017, F1000Research.

Pasteurella multocida sepsis and meningitis in 2-month-old twin infants after household exposure to a slaughtered sheep.

O. Join-Lambert, A. Ferroni, E. Carbonnelle, 2007, Clinical infectious diseases : an official publication of the Infectious Diseases Society of America.

Early Empirical Antibiotic Therapy Modification in Sepsis Using Beta-Lacta Test Directly on Blood Cultures

J. Zahar, B. Pilmis, A. Mizrahi, 2022, International Journal of Translational Medicine.

Medicinal leech therapy and Aeromonas spp. infection

J. Mainardi, P. Prognon, L. Lantieri, 2016, European Journal of Clinical Microbiology & Infectious Diseases.

Multiplex PCR reveals a high prevalence of multiple pathogens in traveller’s diarrhoea in children

L. Titomanlio, S. Bonacorsi, L. De Pontual, 2018, Archives of Disease in Childhood.

Aerobic bacteria as Escherichia coli can survive in ESwabTM medium after a 3 month-freezing at −80°C but not after multiple thawing

J. Zahar, M. Lescat, E. Carbonnelle, 2019, bioRxiv.

Impaired antibody response to COVID-19 vaccination in advanced HIV infection

C. Alloui, E. Carbonnelle, H. Cordel, 2022, AIDS.

Microbiological epidemiology and antibiotic susceptibility of infected meshes after prosthetic abdominal wall repair.

E. Carbonnelle, F. Jauréguy, A. Kołakowska, 2023, Journal of visceral surgery.

[Bloodstream infection due to Campylobacter fetus subspecies fetus and skin involvement: A case series of three patients].

J. Mainardi, I. Podglajen, C. Ficko, 2016, La Revue de medecine interne.

Use of Whole-Genome Sequencing to Explore Mycobacterium tuberculosis Complex Circulating in a Hotspot Department in France

F. Mechaï, Julie Marin, E. Carbonnelle, 2022, Microorganisms.

Pathogens Implicated in Acute Otitis Media Failures After 7-valent Pneumococcal Conjugate Vaccine Implementation in France: Distribution, Serotypes, and Resistance Levels

E. Bingen, E. Bille, S. Pierrot, 2012, The Pediatric infectious disease journal.

Prediction of methicillin-resistant Staphylococcus aureus bloodstream infection: do we need rapid diagnostic tests?

J. Zahar, E. Carbonnelle, H. Cordel, 2019, European Journal of Clinical Microbiology & Infectious Diseases.

Extensively-drug-resistant bacteria carriers among overseas travellers: one-third had not been hospitalized previously.

J. Zahar, E. Carbonnelle, H. Cordel, 2018, International journal of antimicrobial agents.

Differential diagnosis of pulmonary sarcoidosis: a review

J. Bernaudin, D. Valeyre, M. Brauner, 2023, Frontiers in Medicine.

Impact of COVID-19 pandemic on blood culture practices and bacteremia epidemiology

E. Carbonnelle, M. Vasse, E. Farfour, 2023, Diagnostic Microbiology and Infectious Disease.

Risk Factors for the Environmental Spread of Different Multi-Drug-Resistant-Organisms (MDRO): A Prospective Cohort Study.

J. Zahar, B. Pilmis, E. Carbonnelle, 2020, The Journal of hospital infection.

Can Real-Time PCR Allow a Faster Recovery of Hospital Activity in Cases of an Incidental Discovery of Carbapenemase-Producing Enterobacteriaceae and Vancomycin-Resistant Enterococci Carriers?

J. Zahar, L. Marty, E. Carbonnelle, 2019, The Journal of hospital infection.

Can we explain environmental contamination by particular traits associated with patients?

J. Zahar, B. Pilmis, E. Carbonnelle, 2019, The Journal of hospital infection.

Use of the Xpert CarbaR assay for direct detection of carbapenemase genes from blood cultures and urine samples.

B. Picard, E. Carbonnelle, F. Jauréguy, 2017, The Journal of hospital infection.

In vitro antimicrobial activity of "last-resort" antibiotics against unusual nonfermenting Gram-negative bacilli clinical isolates.

H. Jacquier, E. Bille, J. Zahar, 2012, Microbial drug resistance.

Importation of OXA-48-producing Klebsiella pneumoniae from Kuwait.

P. Nordmann, L. Poirel, L. Gutmann, 2012, The Journal of antimicrobial chemotherapy.

Prediction of methicillin-resistant Staphylococcus aureus bloodstream infection: do we need rapid diagnostic tests?

J. Zahar, E. Carbonnelle, H. Cordel, 2019, European Journal of Clinical Microbiology & Infectious Diseases.

Identification of non fermenting Gram negative bacilli isolated in cystic fibrosis by Matrix assisted laser desorption ionization time-of-flight mass spectrometry 1 2 3 4 5 6 7 8 9 10 11 12 13

P. Berche, X. Nassif, I. Sermet-Gaudelus, 2008 .

Viral transmission in asymptomatic cases of SARS-CoV-2 infection

J. Chappé, J. Zahar, C. Alloui, 2020, Journal of Infection.

Robustness of two MALDI-TOF mass spectrometry systems for bacterial identification.

Jean-Louis Herrmann, Hervé Jacquier, Etienne Carbonnelle, 2012, Journal of microbiological methods.

Gram-negative bacteremia: which empirical antibiotic therapy?

H. Jacquier, A. Kouatchet, J. Zahar, 2014, Medecine et maladies infectieuses.

Assessment of five screening strategies for optimal detection of carriers of third-generation cephalosporin-resistant Enterobacteriaceae in intensive care units using daily sampling.

G. Chatellier, A. Caumont-Prim, L. Gutmann, 2014, Clinical microbiology and infection : the official publication of the European Society of Clinical Microbiology and Infectious Diseases.

Escherichia

E. Denamur, L. Landraud, O. Clermont, 2020, Definitions.

Intra-abdominal abscesses: microbiological epidemiology and empirical antibiotherapy.

F. Mechaï, E. Carbonnelle, F. Jauréguy, 2022, Infectious diseases now.

Impact of COVID-19 pandemic on blood culture practices and bacteremia epidemiology

E. Carbonnelle, M. Vasse, G. Péan de Ponfilly, 2023, Diagnostic Microbiology and Infectious Disease.

MALDI-TOF mass spectrometry tools for bacterial identification in clinical microbiology laboratory.

X. Nassif, E. Bille, L. Gutmann, 2011, Clinical biochemistry.

Extensively-drug-resistant bacteria carriers among overseas travellers: one-third had not been hospitalized previously.

J. Zahar, E. Carbonnelle, H. Cordel, 2018, International journal of antimicrobial agents.

Applications de la spectrométrie de masse de type MALDI-TOF en microbiologie

E. Carbonnelle, L. Raskine, 2011 .

IDENTIFICATION METHODS | Identification of Clinical Microorganisms with MALDI-TOF-MS in a Microbiology Laboratory

M. Lavollay, E. Carbonnelle, H. Rostane, 2014 .

Fighting the spread of AmpC-hyperproducing Enterobacteriaceae: beneficial effect of replacing ceftriaxone with cefotaxime.

S. Kernéis, J. Mainardi, L. Gutmann, 2014, The Journal of antimicrobial chemotherapy.

An Educational Game Evening for Medical Residents: A Proof of Concept to Evaluate the Impact on Learning of the Use of Games

Gilbert GREUB, M. Lescat, E. Carbonnelle, 2021, Journal of microbiology & biology education.