Sudha Rao

发表

Breakpoint mapping of a novel de novo translocation t(X;20)(q11.1;p13) by positional cloning and long read sequencing.

A. Dalal, A. D. Bhowmik, U. Dutta, 2019, Genomics.

Genomewide mRNA profiling of esophageal squamous cell carcinoma for identification of cancer biomarkers

E. Montgomery, Shivakumar Keerthikumar, A. Pandey, 2009, Cancer biology & therapy.

Chromatinized Protein Kinase C-θ Directly Regulates Inducible Genes in Epithelial to Mesenchymal Transition and Breast Cancer Stem Cells

G. Goodall, P. A. Gregory, K. Khanna, 2014, Molecular and Cellular Biology.

Genome-Wide Analysis of Gene Expression in T Cells to Identify Targets of the NF-κB Transcription Factor c-Rel1

Jun Wang, M. Shannon, Karen L. Bunting, 2007, The Journal of Immunology.

Obestatin and Nt8U influence glycerolipid metabolism and PPAR gamma signaling in mice.

Sudha Rao, U. Manjappara, ShreeRanga Nagaraj, 2014, The international journal of biochemistry & cell biology.

Targeting Nuclear LSD1 to Reprogram Cancer Cells and Reinvigorate Exhausted T Cells via a Novel LSD1-EOMES Switch

P. Milburn, J. Forwood, J. Dahlstrom, 2020, Frontiers in Immunology.

Nuclear-Biased DUSP6 Expression is Associated with Cancer Spreading Including Brain Metastasis in Triple-Negative Breast Cancer

J. Dahlstrom, Fan Wu, T. Prasanna, 2019, International journal of molecular sciences.

GM-CSF promoter chromatin remodelling and gene transcription display distinct signal and transcription factor requirements

M. Shannon, Sudha Rao, A. Holloway, 2005, Nucleic acids research.

Properties Interferon Coexpression on Vaccine Vaccine and Evaluation of the Effect of Beta Attenuation of a Flavivirus Candidate Internal Ribosome Entry Site-Based

K. Matthaei, A. Khromykh, P. S. Lim, 2014 .

Internal Ribosome Entry Site-Based Attenuation of a Flavivirus Candidate Vaccine and Evaluation of the Effect of Beta Interferon Coexpression on Vaccine Properties

K. Matthaei, A. Khromykh, P. S. Lim, 2013, Journal of Virology.

Novel mutation in a family with WNT1-related osteoporosis.

Sudha Rao, Nandita Mullapudi, I. Panigrahi, 2018, European journal of medical genetics.

413 Changes in Chromatin Accessibility Across the GM-CSF Promoter upon T Cell Activation Are Dependent on Nuclear Factor (cid:2) B

M. Shannon, Sudha Rao, A. Holloway, 2003 .

Across the IL-2 Gene Promoter c-Rel Is Required for Chromatin Remodeling

S. Gerondakis, Sudha Rao, D. Woltring, 2003 .

Early Growth Response Gene 1 (EGR1) Regulates Heparanase Gene Transcription in Tumor Cells*

L. Khachigian, M. Hulett, Sudha Rao, 2005, Journal of Biological Chemistry.

Optimizing microarray in experimental hypertension.

Susan R. Wilson, M. Shannon, Y. Pittelkow, 2005, Kidney international.

Multi-layered epigenetic mechanisms contribute to transcriptional memory in T lymphocytes

K. Hardy, Sudha Rao, W. Tu, 2015, BMC Immunology.

Chromatin Remodeling, Measured by a Novel Real-Time Polymerase Chain Reaction Assay, Across the Proximal Promoter Region of the IL-2 Gene

M. Shannon, E. Procko, Sudha Rao, 2001, The Journal of Immunology.

Comparative epigenomics: an emerging field with breakthrough potential to understand evolution of epigenetic regulation

J. Deakin, T. Ezaz, P. S. Lim, 2014, AIMS Genetics.

Identification of interleukin genes in Pogona vitticeps using a de novo transcriptome assembly from RNA-seq data

A. Papanicolaou, A. Georges, J. Deakin, 2016, Immunogenetics.

Protein kinase C in the immune system: from signalling to chromatin regulation

P. S. Lim, Sudha Rao, C. R. Sutton, 2015, Immunology.

Optimizing poly (ADP‐ribose) polymerase inhibition through combined epigenetic and immunotherapy

K. Khanna, J. Dahlstrom, Fan Wu, 2018, Cancer science.

Mechanisms Underlying T Cell Immunosenescence: Aging and Cytomegalovirus Infection

Sudha Rao, W. Tu, 2016, Front. Microbiol..

Lysine-Specific Histone Demethylase 1A Regulates Macrophage Polarization and Checkpoint Molecules in the Tumor Microenvironment of Triple-Negative Breast Cancer

J. Forwood, K. Hardy, Sudha Rao, 2019, Front. Immunol..

Targeting novel LSD1-dependent ACE2 demethylation domains inhibits SARS-CoV-2 replication

N. Waddell, S. Phipps, A. Bain, 2021, Cell discovery.

The transcriptional repressor Bcl-6 directs T follicular helper cell lineage commitment.

C. Mackay, I. Parish, M. Linterman, 2009, Immunity.

Priming of transcriptional memory responses via the chromatin accessibility landscape in T cells

S. Turner, R. Khanna, Corey Smith, 2017, Scientific Reports.

A tiling array-based comparative genomic hybridization approach to predict copy number variations between Plasmodium falciparum field isolates from the Indian Sub-continent

Ramandeep Kaur, A. Das, R. Mugasimangalam, 2018, F1000Research.

Of Chips and ChIPs

Sudha Rao, M. Frances Shannon, M. Shannon, 2002, Science.

Regulation of H3K4me3 at Transcriptional Enhancers Characterizes Acquisition of Virus-Specific CD8+ T Cell-Lineage-Specific Function.

Linden J. Gearing, D. Purcell, M. Nguyen, 2017, Cell reports.

Distinct Epigenetic Signatures Delineate Transcriptional Programs during Virus-Specific CD8 T Cell Differentiation

T. Speed, A. Kelso, M. Nguyen, 2014 .

SETDB-1: A Potential Epigenetic Regulator in Breast Cancer Metastasis

P. S. Lim, Sudha Rao, Jacob Batham, 2019, Cancers.

Epitherapy and immune checkpoint blockade: using epigenetic reinvigoration of exhausted and dysfunctional T cells to reimburse immunotherapy response

Sudha Rao, J. Chrisp, W. Tu, 2020, BMC Immunology.

Distinct epigenetic signatures delineate transcriptional programs during virus-specific CD8(+) T cell differentiation.

T. Speed, A. Kelso, M. Nguyen, 2014, Immunity.

T cell immunity as a tool for studying epigenetic regulation of cellular differentiation

S. Turner, Sudha Rao, Brendan Russ, 2013, Front. Genet..

The first complete Zoroastrian-Parsi mitochondrial reference genome and genetic signatures of an endogamous non-smoking population

C. Gopalakrishnan, R. Jain, R. Mugasimangalam, 2021 .

Closed Chromatin Architecture Is Induced by an RNA Duplex Targeting the HIV-1 Promoter Region

D. Cooper, A. Kelleher, Kazuo Suzuki, 2008, Journal of Biological Chemistry.

PKC-Theta is a Novel SC35 Splicing Factor Regulator in Response to T Cell Activation

M. Schutkowski, J. Zerweck, T. Knaute, 2015, Front. Immunol..

Chromatinized Protein Kinase C-θ: Can It Escape the Clutches of NF-κB?

P. Milburn, N. Norris, R. Ghildyal, 2012, Front. Immun..

Immunofluorescent staining reveals hypermethylation of microchromosomes in the central bearded dragon, Pogona vitticeps

J. Deakin, A. Livernois, T. Ezaz, 2015, Molecular Cytogenetics.

The biological and clinical significance of stromal-epithelial interactions in breast cancer.

J. Dahlstrom, Fan Wu, Sudha Rao, 2017, Pathology.

Differential Roles for DUSP Family Members in Epithelial-to-Mesenchymal Transition and Cancer Stem Cell Regulation in Breast Cancer

Aamir Ahmad, A. Bullman, J. Dahlstrom, 2016, PloS one.

Epigenetics and immunotherapy: The current state of play

Sudha Rao, J. Dunn, 2017, Molecular immunology.

Multi-Layered Epigenetic Regulatory Mechanisms Mediate Epithelial toMesenchymal Transition in Cancer

Fan Wu, Sudha Rao, A. Zafar, 2014 .

Selective Targeting of Protein Kinase C (PKC)-θ Nuclear Translocation Reduces Mesenchymal Gene Signatures and Reinvigorates Dysfunctional CD8+ T Cells in Immunotherapy-Resistant and Metastatic Cancers

P. Milburn, A. Bain, J. Forwood, 2022, Cancers.

PKCθ and HIV-1 Transcriptional Regulator Tat Co-exist at the LTR Promoter in CD4+ T Cells

J. Alcamí, M. López-Huertas, E. Mateos, 2016, Front. Immunol..

Duplicity of protein kinase C-θ

Sudha Rao, E. Sutcliffe, 2011, Transcription.

Chromatin-associated protein kinase C-θ regulates an inducible gene expression program and microRNAs in human T lymphocytes.

Karen L. Bunting, A. Kelleher, P. Milburn, 2011, Molecular cell.

Interplay between Chromatin Remodeling and Epigenetic Changes during Lineage-Specific Commitment to Granzyme B Expression1

P. Doherty, S. Turner, D. Tremethick, 2009, The Journal of Immunology.

Lineage-Specific Commitment to Granzyme and Epigenetic Changes during Interplay between Chromatin Remodeling

P. Doherty, S. Turner, D. Tremethick, 2009 .

Epigenetic regulation of inducible gene expression in the immune system

P. S. Lim, Sudha Rao, A. Holloway, 2013, Immunology.

Early phase of effective treatment induces distinct transcriptional changes in Mycobacterium tuberculosis expelled by pulmonary tuberculosis patients

Sudha Rao, N. Mistry, K. Sriraman, 2021, Scientific Reports.

c-Rel Is Required for Chromatin Remodeling Across the IL-2 Gene Promoter

M. Shannon, S. Gerondakis, Sudha Rao, 2003, The Journal of Immunology.

Regulation of mouse Heparanase gene expression in T lymphocytes and tumor cells

M. Hulett, Sudha Rao, J. Hornby, 2007, Immunology and cell biology.

Dynamic Histone Variant Exchange Accompanies Gene Induction in T Cells

P. Milburn, I. Parish, D. Tremethick, 2009, Molecular and Cellular Biology.

The molecular signature of CD8+ T cells undergoing deletional tolerance.

A. Strasser, G. Smyth, I. Parish, 2009, Blood.

The microRNA‐9/B‐lymphocyte‐induced maturation protein‐1/IL‐2 axis is differentially regulated in progressive HIV infection

D. Cooper, A. Kelleher, J. Zaunders, 2013, European journal of immunology.

Nuclear PKC-θ facilitates rapid transcriptional responses in human memory CD4+ T cells through p65 and H2B phosphorylation

S. Turner, A. Kelleher, J. Zaunders, 2016, Journal of Cell Science.

The endoglycosidase heparanase enters the nucleus of T lymphocytes and modulates H3 methylation at actively transcribed genes via the interplay with key chromatin modifying enzymes

Karen L. Bunting, I. Poon, M. Hulett, 2012, Transcription.

Genomewide Recruitment Analysis of Rpb4, a Subunit of Polymerase II in Saccharomyces cerevisiae, Reveals Its Involvement in Transcription Elongation

Jiyoti Verma-Gaur, Sudha Rao, P. Sadhale, 2008, Eukaryotic Cell.

Changes in Chromatin Accessibility Across the GM-CSF Promoter upon T Cell Activation Are Dependent on Nuclear Factor κB Proteins

M. Shannon, Sudha Rao, A. Holloway, 2003, The Journal of experimental medicine.

A cross strain Plasmodium falciparum microarray optimized for the transcriptome analysis of Plasmodium falciparum patient derived isolates

J. Acharya, A. Das, R. Mugasimangalam, 2016, Genomics data.

Gene IL-2 Across the Proximal Promoter Region of the Assay , Real-Time Polymerase Chain Reaction Chromatin Remodeling , Measured by a Novel

M. Shannon, E. Procko, Sudha Rao, 2001 .

Differentiation-dependent functional and epigenetic landscapes for cytokine genes in virus-specific CD8+ T cells

P. Doherty, S. Turner, Sudha Rao, 2011, Proceedings of the National Academy of Sciences.

De Novo Transcriptome Assembly (NGS) of Curcuma longa L. Rhizome Reveals Novel Transcripts Related to Anticancer and Antimalarial Terpenoids

M. A. Katta, R. Mugasimangalam, V. Niranjan, 2013, PloS one.

Next generation sequencing and de novo transcriptome analysis of Costus pictus D. Don, a non-model plant with potent anti-diabetic properties

M. A. Katta, R. Mugasimangalam, Vasanthan Jayakumar, 2012, BMC Genomics.

Expression of two WFDC1/ps20 isoforms in prostate stromal cells induces paracrine apoptosis through regulation of PTGS2/COX-2

P. Dasgupta, R. Smith, Oliver Hickman, 2016, British Journal of Cancer.

Epigenetic programming of T cells impacts immune reconstitution in hematopoietic stem cell transplant recipients.

R. Khanna, Corey Smith, G. Hill, 2018, Blood advances.

Somatic Variations in Cervical Cancers in Indian Patients

Poulami Das, R. Mulherkar, S. Shrivastava, 2016, PloS one.

Immune modulation via epigenetic targeting to overcome immune checkpoint inhibitor resistance.

Fan Wu, D. Yip, T. Prasanna, 2019, Immunotherapy.

Interplay between chromatin remodeling and epigenetic changes during lineage-specific commitment to granzyme B expression

P. Doherty, S. Turner, D. Tremethick, 2010, The Journal of Immunology.

The molecular signature of CD8+ T cells undergoing deletional tolerance.

A. Strasser, G. Smyth, I. Parish, 2009, Blood.