Simon Zhongyuan Tian

ChIA-PIPE: A fully automated pipeline for ChIA-PET data analysis and visualization

Sheng Li, Ping Wang, Chia-Lin Wei, 2018, bioRxiv.

MIA-Sig: multiplex chromatin interaction analysis by signal processing and statistical algorithms

Minji Kim, Daniel Capurso, Simon Zhongyuan Tian, 2019, Genome Biology.

ChIA-DropBox: a novel analysis and visualization pipeline for multiplex chromatin interactions

Minji Kim, Daniel Capurso, Simon Zhongyuan Tian, 2019, bioRxiv.

Long-read ChIA-PET for base-pair-resolution mapping of haplotype-specific chromatin interactions

Simon Zhongyuan Tian, Yijun Ruan, Meizhen Zheng, 2017, Nature Protocols.

Multiplex chromatin interactions with single-molecule precision

Daniel Capurso, Simon Zhongyuan Tian, Yijun Ruan, 2019, Nature.