Siladitya Padhi

发表

A probabilistic framework for constructing temporal relations in Monte Carlo trajectories

Harish Krishna, Deva Priyakumar, Siladitya Padhi, 2018 .

The HIV-1 Vpu transmembrane domain topology and formation of a hydrophobic interface with BST-2 are critical for Vpu-mediated BST-2 downregulation

U. D. Priyakumar, S. Jameel, Siladitya Padhi, 2020, bioRxiv.

Cholic Acid-Derived Amphiphile which Combats Gram-Positive Bacteria-Mediated Infections via Disintegration of Lipid Clusters.

U. D. Priyakumar, Avinash Bajaj, Priyanka Sharma, 2019, ACS biomaterials science & engineering.

pH-mediated gating and formate transport mechanism in the Escherichia coli formate channel

U. D. Priyakumar, Siladitya Padhi, Lekkala Karthik Reddy, 2017 .

Molecular Dynamics Simulations Reveal the HIV-1 Vpu Transmembrane Protein to Form Stable Pentamers

U. D. Priyakumar, S. Jameel, Siladitya Padhi, 2013, PloS one.

TPP riboswitch aptamer: Role of Mg2+ ions, ligand unbinding, and allostery.

Gopalakrishnan Bulusu, Navneet Bung, Arijit Roy, 2019, Journal of molecular graphics & modelling.

Prediction of the structures of helical membrane proteins based on a minimum unfavorable contacts approach

U. Deva Priyakumar, Siladitya Padhi, Siddabattula Ramakrishna, 2015, J. Comput. Chem..

Elucidation of DNA Repair Function of PfBlm and Potentiation of Artemisinin Action by a Small-Molecule Inhibitor of RecQ Helicase

Gopalakrishnan Bulusu, Arijit Roy, Siladitya Padhi, 2020, mSphere.

Urea Mimics Nucleobases by Preserving the Helical Integrity of B-DNA Duplexes via Hydrogen Bonding and Stacking Interactions.

U. D. Priyakumar, Indrajit Patil, Siladitya Padhi, 2016, Biochemistry.

Atomistic Detailed Mechanism and Weak Cation-Conducting Activity of HIV-1 Vpu Revealed by Free Energy Calculations

U. D. Priyakumar, S. Jameel, D. Roccatano, 2014, PloS one.

Modeling the structure of SARS 3a transmembrane protein using a minimum unfavorable contact approach

U. D. Priyakumar, Siladitya Padhi, S. Ramakrishna, 2015, Journal of Chemical Sciences.

Plasmodium Topoisomerase VIB and Spo11 Constitute Functional Type IIB Topoisomerase in Malaria Parasite: Its Possible Role in Mitochondrial DNA Segregation

Arijit Roy, Siladitya Padhi, M. Bhattacharyya, 2023, Microbiology spectrum.

Temperature Dependence of the Stability of Ion Pair Interactions, and its Implications on the Thermostability of Proteins from Thermophiles

Agastya P. Bhati, Swetha Bikkina, Siladitya Padhi, 2017, Journal of Chemical Sciences.

Human aminolevulinate synthase structure reveals a eukaryotic-specific autoinhibitory loop regulating substrate binding and product release

G. A. Bezerra, Gopalakrishnan Bulusu, R. Desnick, 2020, Nature Communications.

Selectivity and transport in aquaporins from molecular simulation studies.

Siladitya Padhi, U. Priyakumar, 2020, Vitamins and hormones.

Ion Selectivity and Permeation Mechanism in a Cyclodextrin-Based Channel.

Siladitya Padhi, Pratyusha Musunuru, U. Priyakumar, 2021, The journal of physical chemistry. B.