Mark P Simmons

The relative performance of indel-coding methods in simulations.

Mark P. Simmons, M. Simmons, A. Norton, 2007, Molecular phylogenetics and evolution.

Comprehensive comparative analysis of kinesins in photosynthetic eukaryotes

Dale N. Richardson, Mark P. Simmons, M. Simmons, 2006, BMC Genomics.

Uninode coding vs gene tree parsimony for phylogenetic reconstruction using duplicate genes.

Mark P. Simmons, M. Simmons, J. Freudenstein, 2002, Molecular phylogenetics and evolution.

The effects of increasing genetic distance on alignment of, and tree construction from, rDNA internal transcribed spacer sequences.

M. Simmons, J. Freudenstein, Mark P Simmons, 2003, Molecular phylogenetics and evolution.

Efficiently resolving the basal clades of a phylogenetic tree using Bayesian and parsimony approaches: a case study using mitogenomic data from 100 higher teleost fishes.

M. Simmons, M. Miya, Masaki Miya, 2004, Molecular phylogenetics and evolution.