D. Schneider

发表

Control of rRNA expression in Escherichia coli.

R. Gourse, W. Ross, D. Schneider, 2003, Current opinion in microbiology.

Changes in Escherichia coli rRNA Promoter Activity Correlate with Changes in Initiating Nucleoside Triphosphate and Guanosine 5′ Diphosphate 3′-Diphosphate Concentrations after Induction of Feedback Control of Ribosome Synthesis

R. Gourse, Richard L. Gourse, D. Schneider, 2003, Journal of bacteriology.

Changes in the Concentrations of Guanosine 5′-Diphosphate 3′-Diphosphate and the Initiating Nucleoside Triphosphate Account for Inhibition of rRNA Transcription in Fructose-1,6-Diphosphate Aldolase (fda) Mutants

R. Gourse, D. Schneider, 2003, Journal of bacteriology.

NTP-sensing by rRNA promoters in Escherichia coli is direct

R. Gourse, T. Gaal, D. Schneider, 2002, Proceedings of the National Academy of Sciences of the United States of America.

DksA A Critical Component of the Transcription Initiation Machinery that Potentiates the Regulation of rRNA Promoters by ppGpp and the Initiating NTP

John W. Foster, J. Foster, R. Gourse, 2004, Cell.

The N-terminal domain of the A12.2 subunit stimulates RNA polymerase I transcription elongation.

D. Schneider, A. Lucius, Catherine E. Scull, 2021, Biophysical journal.

Small-Molecule Targeting of RNA Polymerase I Activates a Conserved Transcription Elongation Checkpoint

K. Peltonen, M. Laiho, Hester Liu, 2018, Cell Reports.

Functional divergence of eukaryotic RNA polymerases: unique properties of RNA polymerase I suit its cellular role.

D. Schneider, O. Viktorovskaya, 2015, Gene.

Spt6 Is Essential for rRNA Synthesis by RNA Polymerase I

A. Beyer, D. Schneider, S. French, 2015, Molecular and Cellular Biology.

Purification of active RNA polymerase I from yeast.

D. Schneider, F. Appling, 2015, Methods in molecular biology.

Yeast Transcription Elongation Factor Spt5 Associates with RNA Polymerase I and RNA Polymerase II Directly*

D. Schneider, O. Viktorovskaya, F. Appling, 2011, The Journal of Biological Chemistry.

Transcription elongation by RNA polymerase I is linked to efficient rRNA processing and ribosome assembly.

M. Nomura, Y. Osheim, A. Beyer, 2007, Molecular cell.

RNA polymerase I activity is regulated at multiple steps in the transcription cycle: recent insights into factors that influence transcription elongation.

D. Schneider, 2012, Gene.

Divergent contributions of conserved active site residues to transcription by eukaryotic RNA polymerases I and II.

Craig D. Kaplan, A. Beyer, C. Kaplan, 2013, Cell reports.

Quorum sensing regulates rRNA synthesis in Saccharomyces cerevisiae.

D. Schneider, Saman M Najmi, 2021, Gene.

Histones are required for transcription of yeast rRNA genes by RNA polymerase I.

M. Nomura, A. Beyer, P. Tongaonkar, 2005, Proceedings of the National Academy of Sciences of the United States of America.

Cdc14 inhibits transcription by RNA polymerase I during anaphase

A. Jarmuz, L. Aragón, H. Tschochner, 2009, Nature.

Spt4 Promotes Pol I Processivity and Transcription Elongation

Yvonne J. K. Edwards, D. Schneider, Abigail K. Huffines, 2021, Genes.

The Transcription Elongation Factor Spt5 Influences Transcription by RNA Polymerase I Positively and Negatively*

M. Nomura, A. Beyer, Shilpa Salgia, 2011, The Journal of Biological Chemistry.

Quantifying the influence of 5'-RNA modifications on RNA polymerase I activity.

D. Schneider, A. Lucius, F. Appling, 2017, Biophysical chemistry.

An intersubunit contact stimulating transcription initiation by E. coli RNA polymerase: interaction of the (cid:1) C-terminal domain and (cid:2) region 4

R. Gourse, W. Ross, B. Paul, 2003 .

Targeting ribosomal G-quadruplexes with naphthalene-diimides as RNA polymerase I inhibitors for colorectal cancer treatment.

Carlos González, M. Cuadros, J. A. Garcia-Salcedo, 2021, Cell chemical biology.

The Transcription Factor THO Promotes Transcription Initiation and Elongation by RNA Polymerase I*

A. Beyer, Yinfeng Zhang, D. Schneider, 2015, The Journal of Biological Chemistry.

Molecular Dynamics Study of RNA Polymerase Transcription from Free Energy Calculation

Michelle D. Wang, N. Perkins, L. Finzi, 2013 .

Quantitative analysis of transcription elongation by RNA polymerase I in vitro.

D. Schneider, 2012, Methods in molecular biology.

DNA Binding by the Ribosomal DNA Transcription Factor Rrn3 Is Essential for Ribosomal DNA Transcription*

K. Rothblum, L. Rothblum, A. Cavanaugh, 2013, The Journal of Biological Chemistry.

Efficient transcription by RNA polymerase I using recombinant core factor.

Gregory J Bedwell, D. Schneider, S. Anderson, 2012, Gene.

Measuring control of transcription initiation by changing concentrations of nucleotides and their derivatives.

R. Gourse, H. Murray, D. Schneider, 2003, Methods in enzymology.

The Paf1 complex is required for efficient transcription elongation by RNA polymerase I

A. Beyer, Yinfeng Zhang, D. Schneider, 2009, Proceedings of the National Academy of Sciences.

Uncovering the mechanisms of transcription elongation by eukaryotic RNA polymerases I, II, and III

D. Schneider, A. Lucius, Ruth Q. Jacobs, 2022, iScience.

Journal Pre-proof Uncovering the mechanisms of transcription elongation by eukaryotic RNA polymerases I, II, and III

D. Schneider, A. Lucius, Ruth Q. Jacobs, 2022 .

miR-486 is essential for muscle function and suppresses a dystrophic transcriptome

E. Lai, J. Widrick, Michael A. Lopez, 2022, Life Science Alliance.

A user's guide to the ribosomal DNA in Saccharomyces cerevisiae.

Jeffrey S. Smith, D. Schneider, Joseph M Johnson, 2014, Methods in molecular biology.

The A12.2 Subunit Is an Intrinsic Destabilizer of the RNA Polymerase I Elongation Complex.

D. Schneider, A. Lucius, Catherine E. Scull, 2018, Biophysical journal.

Distinct states of nucleolar stress induced by anti-cancer drugs

L. Florens, J. Gerton, J. Unruh, 2022, bioRxiv.

The regulation of tDNA transcription during the directed differentiation of stem cells

K. Giles, D. Schneider, J. L. Woolnough, 2017, bioRxiv.

RNA Polymerase I Is Uniquely Vulnerable to the Small-Molecule Inhibitor BMH-21

M. Laiho, D. Schneider, A. Lucius, 2022, Cancers.

A Novel Assay for RNA Polymerase I Transcription Elongation Sheds Light on the Evolutionary Divergence of Eukaryotic RNA Polymerases.

D. Schneider, A. Lucius, Catherine E. Scull, 2019, Biochemistry.

Transient-State Kinetic Analysis of the RNA Polymerase I Nucleotide Incorporation Mechanism.

D. Schneider, A. Lucius, F. Appling, 2015, Biophysical journal.

Rate of transcription elongation and sequence-specific pausing by RNA polymerase I directly influence rRNA processing

Yinfeng Zhang, D. Schneider, S. French, 2022, The Journal of biological chemistry.

Direct Characterization of Transcription Elongation by RNA Polymerase I

D. Dunlap, L. Finzi, P. Purohit, 2016, PloS one.

Transient-state Kinetic Analysis of Multi-nucleotide Addition Catalyzed by RNA Polymerase I.

D. Schneider, A. Lucius, Zachariah M. Ingram, 2021, Biophysical journal.

Downstream sequence-dependent RNA cleavage and pausing by RNA polymerase I

D. Schneider, A. Lucius, Catherine E. Scull, 2019, The Journal of Biological Chemistry.

Multisubunit RNA Polymerase Cleavage Factors Modulate the Kinetics and Energetics of Nucleotide Incorporation: An RNA Polymerase I Case Study.

D. Schneider, A. Lucius, F. Appling, 2017, Biochemistry.

Transcription factors that influence RNA polymerases I and II: To what extent is mechanism of action conserved?

Yinfeng Zhang, D. Schneider, Saman M Najmi, 2017, Biochimica et biophysica acta. Gene regulatory mechanisms.

An intersubunit contact stimulating transcription initiation by E coli RNA polymerase: interaction of the alpha C-terminal domain and sigma region 4.

R. Gourse, W. Ross, B. Paul, 2003, Genes & development.

Targeting RNA-Polymerase I in Both Chemosensitive and Chemoresistant Populations in Epithelial Ovarian Cancer

Zachary C. Dobbin, C. Landen, Danielle C. Llaneza, 2017, Clinical Cancer Research.

Defining the Influence of the A12.2 Subunit on Transcription Elongation and Termination by RNA Polymerase I In Vivo

Y. Edwards, C. M. Petit, D. Schneider, 2021, Genes.

The small-molecule BMH-21 directly inhibits transcription elongation and DNA occupancy of RNA polymerase I in vivo and in vitro

M. Laiho, D. Schneider, Abigail K. Huffines, 2021, The Journal of biological chemistry.

Defining the divergent enzymatic properties of RNA polymerases I and II

D. Schneider, A. Lucius, Ruth Q. Jacobs, 2020, The Journal of biological chemistry.

Control of rRNA expression by small molecules is dynamic and nonredundant.

R. Gourse, H. Murray, D. Schneider, 2003, Molecular cell.

Inhibiting β-catenin disables nucleolar functions in triple-negative breast cancer

A. I. Ojesina, Shiqin Wei, J. Mobley, 2021, Cell Death & Disease.

Visual Analysis of the Yeast 5S rRNA Gene Transcriptome: Regulation and Role of La Protein

M. Nomura, S. Wolin, Y. Osheim, 2008, Molecular and Cellular Biology.

Coordinated Control of rRNA Processing by RNA Polymerase I.

D. Schneider, Catherine E. Scull, 2019, Trends in genetics : TIG.

Discovery of novel inhibitors of ribosome biogenesis by innovative high throughput screening strategies.

Nichole A. Tower, R. Bostwick, I. Padmalayam, 2019, The Biochemical journal.

NETSeq reveals heterogeneous nucleotide incorporation by RNA polymerase I

C. M. Petit, K. Giles, D. Schneider, 2018, Proceedings of the National Academy of Sciences.

RNA polymerase I remains intact without subunit exchange through multiple rounds of transcription in Saccharomyces cerevisiae.

M. Nomura, D. Schneider, 2004, Proceedings of the National Academy of Sciences of the United States of America.

The SWI/SNF Chromatin Remodeling Complex Influences Transcription by RNA Polymerase I in Saccharomyces cerevisiae

J. Hartman, A. Beyer, Yinfeng Zhang, 2013, PloS one.

Hu Antigen R (HuR) Is a Positive Regulator of the RNA-binding Proteins TDP-43 and FUS/TLS

S. Thompson, G. Dujardin, P. King, 2014, The Journal of Biological Chemistry.

The RNA Polymerase-associated Factor 1 Complex (Paf1C) Directly Increases the Elongation Rate of RNA Polymerase I and Is Required for Efficient Regulation of rRNA Synthesis*

M. Renfrow, Archer D. Smith, Yinfeng Zhang, 2010, The Journal of Biological Chemistry.

Targeting ribosomal G-quadruplexes with naphthalene-diimides as RNA polymerase I inhibitors for colorectal cancer treatment.

M. Cuadros, J. A. Garcia-Salcedo, D. Schneider, 2021, Cell chemical biology.

Using heterogeneity of the patient-derived xenograft model to identify the chemoresistant population in ovarian cancer

Zachary C. Dobbin, C. Landen, R. Alvarez, 2014, Oncotarget.

RNA polymerase II elongation factors Spt4p and Spt5p play roles in transcription elongation by RNA polymerase I and rRNA processing

J R Yates, J. Yates, A. Bailey, 2006, Proceedings of the National Academy of Sciences.

Identification of an E3 ligase that targets the catalytic subunit of RNA Polymerase I upon transcription stress

M. Laiho, Hester Liu, D. Schneider, 2022, The Journal of biological chemistry.

miR-486 is an epigenetic modulator of Duchenne muscular dystrophy pathologies

E. Lai, J. Widrick, Michael A. Lopez, 2021, bioRxiv.

Ubp-M serine 552 phosphorylation by cyclin-dependent kinase 1 regulates cell cycle progression

Hengbin Wang, Yang Xu, L. Chow, 2013, Cell cycle.

Relationship between Growth Rate and ATP Concentration in Escherichia coli

R. Gourse, D. Schneider, 2004, Journal of Biological Chemistry.

Distinct states of nucleolar stress induced by anti-cancer drugs

L. Florens, J. Gerton, J. Unruh, 2023, bioRxiv.

Multiplexed, Tethered Particle Microscopy for Studies of DNA-Enzyme Dynamics.

D. Dunlap, L. Finzi, E. Weeks, 2017, Methods in enzymology.

Small Molecule RBI2 Disrupts Ribosome Biogenesis through Pre-rRNA Depletion

R. Hunter, Naiheng Yang, Yinfeng Zhang, 2023, Cancers.

Distinct states of nucleolar stress induced by anticancer drugs

L. Florens, J. Gerton, J. Unruh, 2023, bioRxiv.

Targeting RNA-Polymerase I in Both Chemosensitive and Chemoresistant Populations in Epithelial Ovarian Cancer

Zachary C. Dobbin, C. Landen, Danielle C. Llaneza, 2017, Clinical Cancer Research.

Expression of RNA polymerase I catalytic core is influenced by RPA12

M. Laiho, Hester Liu, D. Schneider, 2023, PloS one.

Defining the divergent enzymatic properties of RNA polymerases I and II.

D. Schneider, A. Lucius, Ruth Q. Jacobs, 2020, The Journal of biological chemistry.

Protocol for monitoring and analyzing single nucleotide incorporation by S. cerevisiae RNA polymerases

D. Schneider, A. Lucius, Ruth Q. Jacobs, 2023, STAR protocols.

The A12.2 subunit plays an integral role in pyrophosphate release of RNA Polymerase I.

D. Schneider, A. Lucius, Ruth Q. Jacobs, 2023, Journal of molecular biology.

Transcription elongation mechanisms of RNA polymerases I, II, and III and their therapeutic implications

D. Schneider, Ruth Q. Jacobs, 2024, The Journal of biological chemistry.

Quantifying the impact of initial RNA primer length on nucleotide addition by RNA polymerase I.

D. Schneider, A. Lucius, Stephanie L Cooper, 2023, Biophysical chemistry.

Reversible kinetics in multi-nucleotide addition catalyzed by S. cerevisiae RNA Polymerase II reveal slow pyrophosphate release.

D. Schneider, A. Lucius, Ruth Q. Jacobs, 2024, Journal of molecular biology.

Hmo1 Promotes Efficient Transcription Elongation by RNA Polymerase I in Saccharomyces cerevisiae

D. Schneider, Abigail K. Huffines, 2024, Genes.