T. Yamazaki

发表

Individual ionization constants of all the carboxyl groups in ribonuclease HI from Escherichia coli determined by NMR.

H. Nakamura, S. Kanaya, K. Nagayama, 1994, Biochemistry.

Identification of the region responsible for fibril formation in the CAD domain of caspase-activated DNase.

Tsutomu Nakamura, N. Yumoto, Y. Hagihara, 2005, Journal of biochemistry.

A Suite of Triple Resonance NMR Experiments for the Backbone Assignment of 15N, 13C, 2H Labeled Proteins with High Sensitivity

Weontae Lee, Cheryl H. Arrowsmith, Toshio Yamazaki, 1994 .

Measurement of 2H T1 and T1.rho. Relaxation Times in Uniformly 13C-Labeled and Fractionally 2H-Labeled Proteins in Solution

Brian D. Sykes, Toshio Yamazaki, Lewis E. Kay, 1995 .

Segmental Isotope Labeling for Protein NMR Using Peptide Splicing

Toshio Yamazaki, Y. Kyōgoku, Y. Ishino, 1998 .

NMR observation of selected segments in a larger protein: central-segment isotope labeling through intein-mediated ligation.

Y. Kyōgoku, N. Ito, T. Yamazaki, 1999, Biochemistry.

An NMR-based approach reveals the core structure of the functional domain of SINEUP lncRNAs

Piero Carninci, Hazuki Takahashi, S. Gustincich, 2020, Nucleic acids research.

NMR backbone assignments of the cyanobacterial transcriptional factor, SmtB, that senses the zinc concentration in the cell

H. Hayashi, Y. Kyōgoku, E. Morita, 1998 .

Structural understanding of the allosteric conformational change of cyclic AMP receptor protein by cyclic AMP binding.

Y. Kyōgoku, M. Yoon, S. Park, 2000, Biochemistry.

Identification of the phospholipid-binding site of human beta(2)-glycoprotein I domain V by heteronuclear magnetic resonance.

I. Nishii, M. Hoshino, H. Kato, 2000, Journal of molecular biology.

Solution structure of Gaussia Luciferase with five disulfide bonds and identification of a putative coelenterazine binding cavity by heteronuclear NMR

N. Kobayashi, N. Wu, S. Unzai, 2020, Scientific Reports.

Structural and dynamic characterization of an SH2 domain-phosphopeptide complex by NMR approaches.

L. Kay, J. Forman-Kay, A. Singer, 1995, Biochemical Society transactions.

Both experimental and theoretical investigations of solid-state 17O NMR for L-valine and L-isoleucine.

H. Hirota, Takahiro Nemoto, T. Yamazaki, 2006, Solid state nuclear magnetic resonance.

Understanding hydrogen-bonding structures of molecular crystals via electron and NMR nanocrystallography

K. Yonekura, Y. Nishiyama, T. Oikawa, 2019, Nature Communications.

Title Understanding hydrogen-bonding structures of molecularcrystals via electron and NMR nanocrystallography

K. Yonekura, Y. Nishiyama, T. Oikawa, 2019 .

Solution structure of an RNA duplex including a C-U base pair.

Y. Kyōgoku, S. Miyashita, M. Kainosho, 2000, Biochemistry.

NMR PULSE SCHEMES FOR THE SEQUENCE-SPECIFIC ASSIGNMENT OF ARGININE GUANIDINO 15N AND 1H CHEMICAL SHIFTS IN PROTEINS

L. Kay, J. Forman-Kay, A. Singer, 1995 .

Improved segmental isotope labeling of proteins and application to a larger protein

Y. Kyōgoku, T. Yamazaki, K. Uegaki, 1999, Journal of biomolecular NMR.

A solid‐state 17O NMR study of L ‐phenylalanine and L ‐valine hydrochlorides

Tadashi Shimizu, T. Yamazaki, S. Ohki, 2008, Magnetic resonance in chemistry : MRC.

Experimental determination of the carboxylate oxygen electric-field-gradient and chemical shielding tensors in l-alanine and l-phenylalanine

H. Hirota, Takahiro Nemoto, T. Yamazaki, 2007 .

Solid‐state 17O NMR study of the electric‐field‐gradient and chemical shielding tensors in polycrystalline amino acids

H. Hirota, Takahiro Nemoto, Tadashi Shimizu, 2007, Magnetic resonance in chemistry : MRC.

Solid-state 17O NMR study of the electric-field-gradient and chemical shielding tensors in polycrystalline gamma-glycine.

T. Yamazaki, Mitsuru Yoshida, Kazuhiko Yamada, 2006, Solid state nuclear magnetic resonance.

An HNCA Pulse Scheme for the Backbone Assignment of 15N,13C,2H-Labeled Proteins: Application to a 37-kDa Trp Repressor-DNA Complex

L. Kay, F. Dahlquist, C. Arrowsmith, 1994 .

Solution Structure of the Activator Contact Domain of the RNA Polymerase α Subunit

M. Shirakawa, Y. Kyōgoku, N. Fujita, 1995, Science.

Structure and Dynamics in the Nucleosome Revealed by Solid-State NMR.

L. Nordenskiöld, K. Pervushin, T. Yamazaki, 2018, Angewandte Chemie.

Conformational change of H+-ATPase beta monomer revealed on segmental isotope labeling NMR spectroscopy.

Masasuke Yoshida, H. Akutsu, T. Yamazaki, 2004, Journal of the American Chemical Society.

NMR Crystallographic Approach to Study the Variation of the Dynamics of Quinine and Its Quasienantiomer Quinidine

Manasi Ghosh, Y. Nishiyama, T. Yamazaki, 2022, The Journal of Physical Chemistry C.

Intein Mediated Ligation of Protein Fragments. Application to Segmental Isotope Labeling of NMR Samples.

T. Yamazaki, T. Otomo, 1999 .

Reaction of N-aminopyridinium derivatives. IV. Syntheses of N-aminoquinolinium salts and their reaction with cyanide ion.

M. Hirobe, T. Yamazaki, T. Okamoto, 1966, Chemical & pharmaceutical bulletin.

Rearrangements and ring expansions during the deoxygenation of .beta.,.beta.-disubstituted o-nitrostyrenes

R. Sundberg, T. Yamazaki, 1967 .

Esterification kinetics of 5-hydroxy-1,3-dioxane derivatives with acid anhydrides and acid chlorides in pyridine

T. Yamazaki, J. Sugihara, Jerome M. Knoblich, 1971 .

Characterization of high molecular weight novolak

T. Yamazaki, T. Yamagishi, Y. Nakamoto, 1998 .

Solution structure and fluctuation of the Mg2+‐bound form of calmodulin C‐terminal domain

H. Hirota, W. Ohashi, T. Yamazaki, 2011, Protein science : a publication of the Protein Society.

Zero-field nuclear magnetic resonance in high field by modulated rf sequences.

Y. Nishiyama, T. Yamazaki, 2007, The Journal of chemical physics.

Flexible linker in the RNA polymerase alpha subunit facilitates the independent motion of the C-terminal activator contact domain.

Y. Kyōgoku, A. Ishihama, Y. Jeon, 1997, Journal of molecular biology.

Structure of Musashi1 in a complex with target RNA: the role of aromatic stacking interactions

H. Okano, N. Kobayashi, Takao Imai, 2011, Nucleic acids research.

Structure-Correlation NMR Spectroscopy for Macromolecules Using Repeated Bidirectional Photoisomerization of Azobenzene.

T. Yamazaki, C. Nishimura, T. Nagashima, 2015, Analytical chemistry.

NMR Detection of Semi-Specific Antibody Interactions in Serum Environments

Koichi Kato, H. Yagi, S. Uchiyama, 2017, Molecules.

Silkworm Pupae Function as Efficient Producers of Recombinant Glycoproteins with Stable-Isotope Labeling

E. Park, Koichi Kato, H. Yagi, 2020, Biomolecules.

Identification of the N- and C-terminal substrate binding segments of ferredoxin-NADP+ reductase by NMR.

T. Ikegami, T. Hase, M. Hoshino, 2005, Biochemistry.

NMR Experiments for the Measurement of Carbon Relaxation Properties in Highly Enriched, Uniformly 13C,15N-Labeled Proteins: Application to 13C.alpha. Carbons

L. Kay, R. Muhandiram, T. Yamazaki, 1994 .

Identification of functional features of synthetic SINEUPs, antisense lncRNAs that specifically enhance protein translation

Piero Carninci, Toshio Yamazaki, Silvia Zucchelli, 2018, PloS one.

Direct demonstration of an intramolecular SH2—phosphotyrosine interaction in the Crk protein

Tony Pawson, Toshio Yamazaki, Cyril M. Kay, 1995, Nature.

Structural and dynamic characterization of the phosphotyrosine binding region of a Src homology 2 domain--phosphopeptide complex by NMR relaxation, proton exchange, and chemical shift approaches.

L. Kay, J. Forman-Kay, A. Singer, 1995, Biochemistry.

Nuclear magnetic resonance structure of an SH2 domain of phospholipase C-γ1 complexed with a high affinity binding peptide

T. Pawson, L. Kay, S. Shoelson, 1994, Cell.

Structure of the CAD domain of caspase-activated DNase and interaction with the CAD domain of its inhibitor.

Y. Kyōgoku, S. Nagata, H. Sakahira, 2000, Journal of molecular biology.

Structural mechanism for heparin-binding of the third Kunitz domain of human tissue factor pathway inhibitor.

T. Miyata, H. Kato, T. Yamazaki, 2002, Biochemistry.

Combination of heteronuclear 1H-15N and 1H-13C three-dimensional nuclear magnetic resonance experiments for amide-directed sequential assignment in larger proteins.

H. Nakamura, S. Kanaya, M. Yoshida, 1990, Journal of biochemistry.

Sensitivity-Enhanced Solid-State NMR Detection of Structural Differences and Unique Polymorphs in Pico- to Nanomolar Amounts of Brain-Derived and Synthetic 42-Residue Amyloid-β Fibrils.

Y. Ishii, N. Kobayashi, S. Meredith, 2021, Journal of the American Chemical Society.

Intermolecular contacts between the lambda-Cro repressor and the operator DNA characterized by nuclear magnetic resonance spectroscopy.

Y. Kyōgoku, H. Matsuo, C. Kojima, 1999, Journal of biomolecular structure & dynamics.

Assignments of backbone 1H, 13C, and 15N resonances and secondary structure of ribonuclease H from Escherichia coli by heteronuclear three-dimensional NMR spectroscopy.

H. Nakamura, S. Kanaya, M. Yoshida, 1991, Biochemistry.

Structure of the heterodimeric complex between CAD domains of CAD and ICAD

Toshio Yamazaki, S. Nagata, H. Sakahira, 2000, Nature Structural Biology.

Protein Inhibitor of Neuronal Nitric-oxide Synthase, PIN, Binds to a 17-Amino Acid Residue Fragment of the Enzyme*

Mingjie Zhang, H. Tochio, M. Shimizu, 1998, The Journal of Biological Chemistry.

NMR analysis of the Mg2+-binding properties of aequorin, a Ca2+-binding photoprotein.

H. Hirota, S. Inouye, W. Ohashi, 2005, Journal of Biochemistry (Tokyo).

Structural, Dynamic, and Folding Studies of SH2 and SH3 Domains

L. Kay, J. Forman-Kay, N. Farrow, 1996 .

Dynamic inter-subunit interactions in thermophilic F1-ATPase subcomplexes studied by cross-correlated relaxation-enhanced polarization transfer NMR

Masasuke Yoshida, H. Akutsu, T. Yamazaki, 2008, Journal of biomolecular NMR.

Amyloid fibril formation by the CAD domain of caspase‐activated DNase

K. Harata, Hitoshi Yamamoto, Tsutomu Nakamura, 2005, Biopolymers.

Solution structure of the IRF-2 DNA-binding domain: a novel subgroup of the winged helix-turn-helix family.

M. Swindells, T. Taniguchi, J. Furui, 1998, Structure.

Simultaneous Acquisition of 15N- and 13C-Edited NOE Spectra of Proteins Dissolved in H2O

L. Kay, J. Forman-Kay, D. Muhandiram, 1994 .

Interaction of the C-terminal domain of the E. coli RNA polymerase alpha subunit with the UP element: recognizing the backbone structure in the minor groove surface.

Y. Kyōgoku, A. Ishihama, T. Kodama, 2001, Journal of molecular biology.

Letter to the Editor: Backbone 1H, 13C and 15N resonance assignments for the Mg2+-bound form of the Ca2+-binding photoprotein aequorin

S. Yokoyama, H. Hirota, S. Inouye, 2005, Journal of biomolecular NMR.

Structure of human PRL‐3, the phosphatase associated with cancer metastasis

Weontae Lee, J. Jee, Chulhyun Lee, 2004, FEBS letters.

Two-dimensional NMR experiments for correlating carbon-13.beta. and proton.delta./.epsilon. chemical shifts of aromatic residues in 13C-labeled proteins via scalar couplings

L. Kay, J. Forman-Kay, T. Yamazaki, 1993 .

Complete assignments of magnetic resonances of ribonuclease H from Escherichia coli by double- and triple-resonance 2D and 3D NMR spectroscopies.

M. Yoshida, K. Nagayama, T. Yamazaki, 1993, Biochemistry.

Development of modulated rf sequences for decoupling and recoupling of nuclear-spin interactions in sample-spinning solid-state NMR: application to chemical-shift anisotropy determination.

Y. Nishiyama, T. Yamazaki, T. Terao, 2006, The Journal of chemical physics.

Short polyglutamine peptide forms a high-affinity binding site for thioflavin-T at the N-terminus.

S. Matsuoka, M. Inoue, T. Yamazaki, 2012, Organic & biomolecular chemistry.

Misfolding of a Single Disulfide Bonded Globular Protein into a Low-Solubility Species Conformationally and Biophysically Distinct from the Native One

Y. Kuroda, T. Yamazaki, T. Saotome, 2019, Biomolecules.

Letter to the Editor: Backbone NMR assignments of a cyanobacterial transcriptional factor, SmtB, that binds zinc ions

H. Hayashi, Y. Kyōgoku, T. Yamazaki, 1999, Journal of biomolecular NMR.

Binding of a small molecule water channel inhibitor to aquaporin Z examined by solid-state MAS NMR

J. Torres, K. Pervushin, T. Yamazaki, 2018, Journal of biomolecular NMR.

Binding of a small molecule water channel inhibitor to aquaporin Z examined by solid-state MAS NMR

J. Torres, K. Pervushin, T. Yamazaki, 2018, Journal of Biomolecular NMR.

Effect of position-specific single-point mutations and biophysical characterization of amyloidogenic peptide fragments identified from lattice corneal dystrophy patients

J. Mehta, R. Lakshminarayanan, K. Pervushin, 2017, The Biochemical journal.

Nanodisc reconstitution of flavin mononucleotide binding domain of cytochrome-P450-reductase enables high-resolution NMR probing.

A. Ramamoorthy, G. Anantharamaiah, B. Krishnarjuna, 2021, Chemical communications.

2D NMR observation of strain-induced β-form in poly[(R)-3-hydroxybutyrate]

Toshihisa Tanaka, T. Iwata, Y. Nishiyama, 2006 .

Nuclear Magnetic Resonance Detection of Hydrogen Bond Network in a Proton Pump Rhodopsin RxR and Its Alteration during the Cyclic Photoreaction.

Keiichi Kojima, T. Yamazaki, T. Nagashima, 2023, Journal of the American Chemical Society.

Characterization of retinal chromophore and protonated Schiff base in Thermoplasmatales archaeon heliorhodopsin using solid-state NMR spectroscopy.

A. Naito, I. Kawamura, K. Katayama, 2023, Biophysical chemistry.

Toward the solution structure of large (>30 kDa) proteins and macromolecular complexes

L. Kay, C. Arrowsmith, Weontae Lee, 1995 .

The Structure and the Characteristic DNA Binding Property of the C-terminal Domain of the RNA Polymerase α Subunit fromThermus thermophilus *

Y. Kyōgoku, T. Yamazaki, T. Wada, 2000, The Journal of Biological Chemistry.

Biophysical analysis of Gaussia Luciferase bioluminescence mechanisms using a non-oxidizable coelenterazine

N. Wu, Y. Kuroda, T. Yamazaki, 2022, bioRxiv.

RIBONUCLEASE H: FULL ASSIGNMENT OF BACKBONE PROTON RESONANCES WITH HETERONUCLEAR 3D NMR AND SOLUTION STRUCTURE

Haruki Nakamura, S. Kanaya, K. Nagayama, 1991 .

CAD–ICAD complex structure derived from saturation transfer experiment and simulated annealing without using pairwise NOE information

Haruki Nakamura, N. Nakajima, T. Matsuda, 2004, Journal of Molecular Recognition.

Model building of a protein-protein complexed structure using saturation transfer and residual dipolar coupling without paired intermolecular NOE

Haruki Nakamura, Tomoki Matsuda, Toshio Yamazaki, 2004, Journal of biomolecular NMR.

Improved protein splicing reaction for low solubility protein fragments without insertion of native extein residues

Y. Kuroda, T. Yamazaki, Shihori Sohya, 2009, Biopolymers.

Decoherence optimized tilted-angle cross polarization: A novel concept for sensitivity-enhanced solid-state NMR using ultra-fast magic angle spinning.

Y. Ishii, I. Matsuda, T. Yamazaki, 2020, Journal of magnetic resonance.

Assignments of1H−15N magnetic resonances and identification of secondary structure elements of the λ-cro repressor

M. Shirakawa, Y. Kyōgoku, H. Matsuo, 1991 .