T. Anderson

Tavis K. Anderson, A. Vincent, P. Gauger, 2020, Journal of veterinary diagnostic investigation : official publication of the American Association of Veterinary Laboratory Diagnosticians, Inc.

Characterization of co-circulating swine influenza A viruses in North America and the identification of a novel H1 genetic clade with antigenic significance.

Tavis K. Anderson, A. Vincent, M. Nelson, 2015, Virus research.

Characterizing a century of genetic diversity and contemporary antigenic diversity of N1 neuraminidase in IAV from North American swine

Tavis K. Anderson, David E. Hufnagel, D. Rajão, 2022, bioRxiv.

Culex flavivirus and West Nile virus mosquito coinfection and positive ecological association in Chicago, United States.

Tavis K. Anderson, Francesco Cerutti, E. Walker, 2011, Vector borne and zoonotic diseases.

Decreased Flight Activity in Culex pipiens (Diptera: Culicidae) Naturally Infected With Culex flavivirus

Tavis K. Anderson, T. Goldberg, C. Newman, 2015, Journal of Medical Entomology.

The worm's eye view of community ecology

Tavis K. Anderson, M. Sukhdeo, T. Anderson, 2016 .

Terrestrial vegetation and aquatic chemistry influence larval mosquito abundance in catch basins, Chicago, USA

Tavis K. Anderson, E. Walker, Allison M. Gardner, 2013, Parasites & Vectors.

Host group formation decreases exposure to vector-borne disease: a field experiment in a ‘hotspot’ of West Nile virus transmission

Tavis K. Anderson, E. Walker, T. Goldberg, 2014, Proceedings of the Royal Society B: Biological Sciences.

Qualitative community stability determines parasite establishment and richness in estuarine marshes

Tavis K. Anderson, M. Sukhdeo, T. Anderson, 2013, PeerJ.

Porcine reproductive and respiratory disease virus: Evolution and recombination yields distinct ORF5 RFLP 1-7-4 viruses with individual pathogenicity.

Tavis K. Anderson, P. Gauger, K. Harmon, 2018, Virology.

An inverse association between West Nile virus serostatus and avian malaria infection status

Tavis K. Anderson, R. Ricklefs, E. Walker, 2014, Parasites & Vectors.

RF-Net 2: Fast Inference of Virus Reassortment and Hybridization Networks

Tavis K. Anderson, Oliver Eulenstein, Alexey Markin, 2021, bioRxiv.

In Silico Analysis of the Fucosylation-Associated Genome of the Human Blood Fluke Schistosoma mansoni: Cloning and Characterization of the Fucosyltransferase Multigene Family

Tavis K. Anderson, T. Yoshino, T. Anderson, 2013, PloS one.

Abiotic versus biotic hierarchies in the assembly of parasite populations

Tavis K. Anderson, M. Sukhdeo, T. Anderson, 2009, Parasitology.

Antigenic and genetic evolution of contemporary swine H1 influenza viruses in the United States.

Tavis K. Anderson, Amy L. Vincent, Nicola S. Lewis, 2018, Virology.

Influenza A(H3N2) Virus in Swine at Agricultural Fairs and Transmission to Humans, Michigan and Ohio, USA, 2016

Tavis K. Anderson, Amy L. Vincent, Rasna R. Walia, 2017, Emerging infectious diseases.

The global antigenic diversity of swine influenza A viruses

Tavis K. Anderson, Paul Kellam, Takehiko Saito, 2016, eLife.

Selective constraint and adaptive potential of West Nile virus within and among naturally infected avian hosts and mosquito vectors

Tavis K. Anderson, Chase W. Nelson, E. Walker, 2018, Virus evolution.

A New Species of Hysterothylacium (Nematoda: Anisakidae) from the Stomach of the Red-Spotted Newt, Notophthalmus viridescens, from Pennsylvania Fishless Ponds

T. Raffel, T. Anderson, 2009, The Journal of parasitology.

Ranking viruses: measures of positional importance within networks define core viruses for rational polyvalent vaccine development

Tavis K. Anderson, Eric A. Nelson, William W. Laegreid, 2012, Bioinform..

Broad Protection against Avian Influenza Virus by Using a Modified Vaccinia Ankara Virus Expressing a Mosaic Hemagglutinin Gene

Tavis K. Anderson, T. Goldberg, J. Osorio, 2014, Journal of Virology.

The avian‐origin H3N2 canine influenza virus that recently emerged in the United States has limited replication in swine

A. Vincent, P. Gauger, D. Rajão, 2016, Influenza and other respiratory viruses.

Fine-Scale Variation in Vector Host Use and Force of Infection Drive Localized Patterns of West Nile Virus Transmission

Tavis K. Anderson, L. F. Chaves, E. Walker, 2011, PloS one.

A highly pathogenic avian influenza virus H5N1 with 2009 pandemic H1N1 internal genes demonstrates increased replication and transmission in pigs.

Tavis K. Anderson, A. Vincent, P. Gauger, 2016, The Journal of general virology.

Dispersal of Adult Culex Mosquitoes in an Urban West Nile Virus Hotspot: A Mark-Capture Study Incorporating Stable Isotope Enrichment of Natural Larval Habitats

Tavis K. Anderson, E. Walker, T. Goldberg, 2014, PLoS neglected tropical diseases.

Genetic and Antigenic Characterization of an Expanding H3 Influenza A Virus Clade in U.S. Swine Visualized by Nextstrain

Tavis K. Anderson, A. Vincent, P. Gauger, 2021, bioRxiv.

Introductions of Human-Origin Seasonal H3N2, H1N2 and Pre-2009 H1N1 Influenza Viruses to Swine in Brazil

Tavis K. Anderson, D. Gava, D. M. Junqueira, 2023, Viruses.

A highly pathogenic avian influenza virus H5N1 with 2009 pandemic H1N1 internal genes demonstrates increased replication and transmission in pigs.

Tavis K. Anderson, A. Vincent, P. Gauger, 2016, The Journal of general virology.

Consensus of All Solutions for Intractable Phylogenetic Tree Inference

Tavis K. Anderson, Oliver Eulenstein, Alexey Markin, 2019, IEEE/ACM Transactions on Computational Biology and Bioinformatics.

The United States Swine Pathogen Database: integrating veterinary diagnostic laboratory sequence data to monitor emerging pathogens of swine

Tavis K. Anderson, P. Gauger, K. Harmon, 2021, bioRxiv.

Spatial and temporal coevolution of N2 neuraminidase and H1 and H3 hemagglutinin genes of influenza A virus in US swine

Tavis K. Anderson, A. Vincent, P. Gauger, 2021, Virus evolution.

Characterization of a 2016-2017 Human Seasonal H3 Influenza A Virus Spillover Now Endemic to U.S. Swine

Tavis K. Anderson, A. Vincent, P. Gauger, 2022, mSphere.

Evolution and Antigenic Advancement of N2 Neuraminidase of Swine Influenza A Viruses Circulating in the United States following Two Separate Introductions from Human Seasonal Viruses

Tavis K. Anderson, A. Vincent, D. Pérez, 2021, Journal of virology.

Characterization of contemporary 2010.1 H3N2 swine influenza A viruses circulating in United States pigs.

Tavis K. Anderson, A. Vincent, P. Gauger, 2020, Virology.

Swine Influenza A Viruses and the Tangled Relationship with Humans.

Tavis K. Anderson, C. Davis, A. Vincent, 2020, Cold Spring Harbor perspectives in medicine.

Influenza Research Database: An integrated bioinformatics resource for influenza virus research

Xiaomei Li, Guangyu Sun, Hongtao Zhao, 2016, Nucleic Acids Res..

Genotype patterns of contemporary reassorted H3N2 virus in US swine.

Tavis K. Anderson, Martha I Nelson, A. Vincent, 2013, The Journal of general virology.

West Nile virus may have hitched a ride across the Western United States on Culex tarsalis mosquitoes

T. Goldberg, T. Anderson, G. Hamer, 2010, Molecular ecology.

Novel Reassortant Human-Like H3N2 and H3N1 Influenza A Viruses Detected in Pigs Are Virulent and Antigenically Distinct from Swine Viruses Endemic to the United States

Tavis K. Anderson, Amy L. Vincent, Nicola S. Lewis, 2015, Journal of Virology.

A Brief Introduction to Influenza A Virus in Swine.

Tavis K. Anderson, A. Vincent, K. Lager, 2020, Methods in molecular biology.

A brief introduction to influenza A virus in swine.

Tavis K. Anderson, A. Vincent, K. Lager, 2014, Methods in molecular biology.

Comparative virulence of wild-type H1N1pdm09 influenza A isolates in swine.

Tavis K. Anderson, A. Vincent, D. Rajão, 2015, Veterinary microbiology.

Comparative Virulence and Genomic Analysis of Streptococcus suis Isolates

Tavis K. Anderson, T. Nicholson, M. Eppinger, 2021, Frontiers in Microbiology.

Comparison of multilocus sequence types found among North American isolates of Mycoplasma bovis from cattle, bison, and deer, 2007–2017

R. Derscheid, R. Bildfell, D. Hunter, 2019, Journal of veterinary diagnostic investigation : official publication of the American Association of Veterinary Laboratory Diagnosticians, Inc.

Novel reassortant human-like H 3 N 2 and H 3 N 1 influenza A viruses detected in pigs 1 are virulent and antigenically distinct from endemic viruses 2

Tavis K. Anderson, P. Gauger, D. Pérez, 2015 .

Influenza A virus vaccines for swine.

Tavis K. Anderson, Rasna R. Walia, A. Vincent, 2017, Veterinary microbiology.

Tripal, a community update after 10 years of supporting open source, standards-based genetic, genomic and breeding databases

Tavis K. Anderson, Ethalinda K. S. Cannon, Monica F. Poelchau, 2021, Briefings Bioinform..

Culex Flavivirus During West Nile Virus Epidemic and Interepidemic Years in Chicago, United States.

Tavis K. Anderson, T. Goldberg, U. Kitron, 2017, Vector borne and zoonotic diseases.

Antigenic Distance between North American Swine and Human Seasonal H3N2 Influenza A Viruses as an Indication of Zoonotic Risk to Humans

Tavis K. Anderson, A. Vincent, R. Rothman, 2021, Journal of virology.

Machine Learning Prediction and Experimental Validation of Antigenic Drift in H3 Influenza A Viruses in Swine

Tavis K. Anderson, A. Vincent, P. Gauger, 2020, mSphere.

Robinson-Foulds Reticulation Networks

Tavis K. Anderson, Oliver Eulenstein, Alexey Markin, 2019, bioRxiv.

OFFLU swine influenza experts develop global nomenclature system and automated annotation tool for H1 haemagglutinin genes of influenza A viruses

R. Scheuermann, C. Macken, A. Vincent, 2017 .

The genomic evolution of H1 influenza A viruses from swine detected in the United States between 2009 and 2016.

Tavis K. Anderson, Rasna R. Walia, Rasna R Walia, 2017, The Journal of general virology.

Population dynamics of cocirculating swine influenza A viruses in the United States from 2009 to 2012

Tavis K. Anderson, Amy L. Vincent, A. Vincent, 2013, Influenza and other respiratory viruses.

Swine-to-Ferret Transmission of Antigenically Drifted Contemporary Swine H3N2 Influenza A Virus Is an Indicator of Zoonotic Risk to Humans

Tavis K. Anderson, David E. Hufnagel, C. Davis, 2023, Viruses.

smot: a python package and CLI tool for contextual phylogenetic subsampling

Tavis K. Anderson, Zebulun W. Arendsee, T. Anderson, 2022, J. Open Source Softw..

Complete Genome Sequences of Two Novel Human-Like H3N2 Influenza A Viruses, A/swine/Oklahoma/65980/2017 (H3N2) and A/Swine/Oklahoma/65260/2017 (H3N2), Detected in Swine in the United States

Tavis K. Anderson, A. Vincent, P. Gauger, 2018, Microbiology Resource Announcements.

ISU FLUture: a veterinary diagnostic laboratory web-based platform to monitor the temporal genetic patterns of Influenza A virus in swine

Rasna W Walia, A. Vincent, P. Gauger, 2018, BMC Bioinformatics.

Antigenic evolution of H3N2 influenza A viruses in swine in the United States from 2012 to 2016

Tavis K. Anderson, A. Vincent, T. Anderson, 2018, Influenza and other respiratory viruses.

Reverse-zoonoses of 2009 H1N1 pandemic influenza A viruses and evolution in United States swine results in viruses with zoonotic potential

Tavis K. Anderson, P. Gauger, Jianqiang Zhang, 2022, bioRxiv.

Pathogenesis and vaccination of influenza A virus in swine.

Tavis K. Anderson, Phillip C Gauger, A. Vincent, 2014, Current topics in microbiology and immunology.

Mucin 4 is a cellular biomarker of necrotizing bronchiolitis in influenza A virus infection.

Tavis K. Anderson, T. Anderson, Samantha J. Hau, 2023, Microbes and infection.

Phylogenetic diversity statistics for all clades in a phylogeny

O. Eulenstein, T. Anderson, A. Markin, 2023, Bioinformatics.

Live attenuated influenza A virus vaccine expressing an IgA-inducing protein protects pigs against replication and transmission

Tavis K. Anderson, P. Gauger, L. Ferreri, 2023, Frontiers in Virology.

Terrestrial vegetation and aquatic chemistry influence larval mosquito abundance in catch basins, Chicago, USA

E. Walker, Allison M. Gardner, M. Ruiz, 2013, Parasites & Vectors.

The Relationship Between Community Species Richness and the Richness of the Parasite Community in Fundulus heteroclitus

M. Sukhdeo, T. Anderson, 2013, The Journal of parasitology.