Ryo Kakioka

发表

Phylogeny and historical demography of endemic fishes in Lake Biwa: the ancient lake as a promoter of evolution and diversification of freshwater fishes in western Japan

Katsutoshi Watanabe, Ryoichi Tabata, Ryo Kakioka, 2016, Ecology and evolution.

Phylogenomics reveals habitat-associated body shape divergence in Oryzias woworae species group (Teleostei: Adrianichthyidae).

A. Ishikawa, Shingo Fujimoto, J. Kitano, 2018, Molecular phylogenetics and evolution.

GEDIMAP: a database of genetic diversity for Japanese freshwater fishes

Katsutoshi Watanabe, T. Mukai, Y. Kano, 2010, Ichthyological Research.

Local Adaptation and the Evolution of Genome Architecture in Threespine Stickleback

A. Toyoda, S. Yeaman, J. Chang Mell, 2022, Genome biology and evolution.

Japanese Freshwater Fishes: Biogeography and Cryptic Diversity

Katsutoshi Watanabe, Jun Nakajima, Ryoichi Tabata, 2017 .

Multiple waves of freshwater colonization of the three-spined stickleback in the Japanese Archipelago

A. Toyoda, A. Ishikawa, A. Nagano, 2020, BMC Evolutionary Biology.

A key metabolic gene for recurrent freshwater colonization and radiation in fishes

A. Toyoda, A. Ishikawa, J. Inoue, 2019, Science.

Ancient Admixture in Freshwater Halfbeaks of the Genus Nomorhamphus in Southeast Sulawesi

J. Kitano, K. Yamahira, Ryo Kakioka, 2022, Zoological Science.

Genome-wide patterns of divergence and introgression after secondary contact between Pungitius sticklebacks

A. Toyoda, A. Nagano, P. Møller, 2020, Philosophical Transactions of the Royal Society B.

Differences in the contributions of sex-linkage and androgen regulation to sex-biased gene expression in juvenile and adult sticklebacks.

A. Toyoda, A. Ishikawa, M. Kusakabe, 2020, Journal of evolutionary biology.

Species divergence and repeated ancient hybridization in a Sulawesian lake system

A. Toyoda, A. Nagano, R. Kimura, 2021, Journal of evolutionary biology.

Genetic basis for variation in the number of cephalic pores in a hybrid zone between closely related species of goby, Gymnogobius breunigii and Gymnogobius castaneus

A. Toyoda, A. Ishikawa, A. Nagano, 2021 .

A RAD-based linkage map and comparative genomics in the gudgeons (genus Gnathopogon, Cyprinidae)

Katsutoshi Watanabe, Ryo Kakioka, N. Okuda, 2013, BMC Genomics.

Population genetic structure, diversity and stocking effect of the oriental weatherloach (Misgurnus anguillicaudatus) in an isolated island

Y. Shimatani, Katsutoshi Watanabe, Y. Kawaguchi, 2011, Environmental Biology of Fishes.

Resource partitioning is not coupled with assortative mating in sympatrically divergent ricefish in a Wallacean ancient lake

A. Nagano, S. Ansai, K. Yamahira, 2021, Journal of evolutionary biology.

Latitudinal variation in sexual dimorphism in a freshwater fish group

Shingo Fujimoto, Katsutoshi Watanabe, R. Raghavan, 2020 .

Genetic architectures of postmating isolation and morphology of two highly diverged rockfishes (genus Sebastes)

A. Nagano, Y. Shimizu, Hiroshi Takahashi, 2023, bioRxiv.

Genetic and morphological differences among the three species of the genus Rastrelliger (Perciformes: Scombridae)

H. Takeshima, R. Traifalgar, H. Motomura, 2015, Ichthyological Research.

Genetic population structure of Hemigrammocypris rasborella (Cyprinidae) inferred from mtDNA sequences

Katsutoshi Watanabe, Jun Nakajima, N. Onikura, 2014, Ichthyological Research.

Mesozoic origin and ‘out-of-India’ radiation of ricefishes (Adrianichthyidae)

Shingo Fujimoto, Y. Takami, R. Kimura, 2021, Biology Letters.

Cryptic genetic divergence in Scolopsis taenioptera (Perciformes: Nemipteridae) in the western Pacific Ocean

H. Takeshima, R. Traifalgar, S. Ishikawa, 2017, Ichthyological Research.

The origins of limnetic forms and cryptic divergence in Gnathopogon fishes (Cyprinidae) in Japan

Katsutoshi Watanabe, Ryoichi Tabata, Ryo Kakioka, 2013, Environmental Biology of Fishes.

Rapid and cost-effective molecular identification of the three mackerel species of the genus Rastrelliger (Perciformes: Scombridae) using PCR-RFLP analysis

H. Takeshima, R. Traifalgar, S. Ishikawa, 2017, Marine Biodiversity.

Two highly divergent mitochondrial DNA lineages within Pseudogobio esocinus populations in central Honshu, Japan

Katsutoshi Watanabe, Ryo Kakioka, K. Tominaga, 2009, Ichthyological Research.

Population Divergence of Biwia zezera (Cyprinidae: Gobioninae) and the Discovery of a Cryptic Species, Based on Mitochondrial and Nuclear DNA Sequence Analyses

Katsutoshi Watanabe, T. Mukai, Ryo Kakioka, 2010, Zoological science.

Genomic architecture of habitat‐related divergence and signature of directional selection in the body shapes of Gnathopogon fishes

Katsutoshi Watanabe, Ryo Kakioka, N. Okuda, 2015, Molecular ecology.

Genetic diversity and conservation units in wild and captive populations of endangered freshwater fishes: a case of Hemigrammocypris rasborella in Shizuoka, Japan

Katsutoshi Watanabe, Ryo Kakioka, Seiichi Mori, 2009, Ichthyological Research.

Isolation and characterization of 12 microsatellite loci for cross‐species amplification in the cyprinid gudgeons Squalidus chankaensis and S. japonicus

M. Nishida, Katsutoshi Watanabe, H. Takeshima, 2009, Molecular ecology resources.

Genetic and morphological differences among the three species of the genus Rastrelliger (Perciformes: Scombridae)

H. Takeshima, R. Traifalgar, S. Ishikawa, 2016, Ichthyological Research.

Fine‐scale phylogeography of coastal fishes in the South China Sea: Possible roles of biological traits and geography

H. Takeshima, M. A. Ghaffar, N. V. Quan, 2021, Journal of Biogeography.

Multiple colonizations and hybridization of a freshwater fish group on a satellite island of Sulawesi.

A. Nagano, H. Nuryadi, S. Ansai, 2023, Molecular phylogenetics and evolution.

A Cryptic Sex-Linked Locus Revealed by the Elimination of a Master Sex-Determining Locus in Medaka Fish

Shingo Fujimoto, S. Ansai, J. Kitano, 2023, The American Naturalist.

Development and validation of novel SNP markers for the rapid identification of natural hybrids of the 11 closely related pufferfish species (Takifugu spp.) distributed in Japan

Ryo Kakioka, H. Takahashi, Atsushi J. Nagano, 2023, Aquaculture Reports.