Tracy L. Johnson

发表

Introduction to cotranscriptional RNA splicing.

Evan C. Merkhofer, Peter Hu, Tracy L. Johnson, 2014, Methods in molecular biology.

Mathematical modeling identifies potential gene structure determinants of co-transcriptional control of alternative pre-mRNA splicing

A. Hoffmann, J. Davis-Turak, Tracy L. Johnson, 2018, Nucleic acids research.

U1 snRNA Rewrites the “Script”

Evan C. Merkhofer, Tracy L. Johnson, 2012, Cell.

H3K36 Methylation and the Chromodomain Protein Eaf3 Are Required for Proper Cotranscriptional Spliceosome Assembly

M. Pellegrini, M. Morselli, S. Douglass, 2019, Cell reports.

The chromatin remodeling complex Swi/Snf regulates splicing of meiotic transcripts in Saccharomyces cerevisiae

S. Douglass, S. Venkataramanan, Tracy L. Johnson, 2017, Nucleic acids research.

Complexes of yeast RNA polymerase II and RNA are substrates for TFIIS-induced RNA cleavage

M. Chamberlin, Tracy L. Johnson, 1994, Cell.

UNIVERSITY OF CALIFORNIA, SAN DIEGO Features of the GCR1 Intron that Contribute to its Retention and Gcr1 Regulation A Thesis submitted in partial satisfaction of the requirements for the degree Master of Science in Biology by

Tracy L. Johnson, Sara L. Pennebaker, Julia M. Claggett, 2013 .

The Exon Junction Complex: A Multitasking Guardian of the Transcriptome.

Tracy L. Johnson, Calvin S. Leung, 2018, Molecular cell.

Kinetics of mRNA nuclear export regulate innate immune response gene expression

Erin M. Wissink, D. Black, Y. Xing, 2022, Nature Communications.

The histone variant H2A.Z promotes efficient cotranscriptional splicing in S. cerevisiae

R. Spreafico, T. Kress, S. Douglass, 2017, Genes & development.

Posttranscriptional Regulation of Gcr1 Expression and Activity Is Crucial for Metabolic Adjustment in Response to Glucose Availability.

J. Hasty, Tracy L. Johnson, M. A. Hossain, 2016, Molecular cell.

Regulated pre-mRNA splicing: the ghostwriter of the eukaryotic genome.

J. Vilardell, Tracy L. Johnson, 2012, Biochimica et biophysica acta.

Epigenetic control: slow and global, nimble and local.

A. Hoffmann, Christine S Cheng, Tracy L. Johnson, 2008, Genes & development.

Considering the kinetics of mRNA synthesis in the analysis of the genome and epigenome reveals determinants of co-transcriptional splicing

L. Tsimring, A. Hoffmann, C. Glass, 2014, Nucleic acids research.

An Investigation of a Role for U2 snRNP Spliceosomal Components in Regulating Transcription

Tracy L. Johnson, Susannah L. McKay, 2011, PloS one.

A bird's-eye view of post-translational modifications in the spliceosome and their roles in spliceosome dynamics.

Tracy L. Johnson, Susannah L. McKay, 2010, Molecular bioSystems.

SMITten by the Speed of Splicing

M. Ares, Tracy L. Johnson, 2016, Cell.

Dynamic histone acetylation is critical for cotranscriptional spliceosome assembly and spliceosomal rearrangements

Evan C. Merkhofer, Tracy L. Johnson, Felizza Q. Gunderson, 2011, Proceedings of the National Academy of Sciences.

Acetylation by the Transcriptional Coactivator Gcn5 Plays a Novel Role in Co-Transcriptional Spliceosome Assembly

Tracy L. Johnson, Felizza Q. Gunderson, 2009, PLoS genetics.

Antagonistic gene transcripts regulate adaptation to new growth environments

Jeff Hasty, Lev S Tsimring, Matthew R Bennett, 2011, Proceedings of the National Academy of Sciences.

Key features of the two-intron Saccharomyces cerevisiae gene SUS1 contribute to its alternative splicing

Caitlin M. Rodriguez, Tracy L. Johnson, C. Rodriguez, 2011, Nucleic acids research.

The Yeast Cap Binding Complex Modulates Transcription Factor Recruitment and Establishes Proper Histone H3K36 Trimethylation during Active Transcription

Tracy L. Johnson, M. A. Hossain, S. Pradhan, 2012, Molecular and Cellular Biology.

The cap binding complex influences H2B ubiquitination by facilitating splicing of the SUS1 pre-mRNA.

Tracy L. Johnson, T. Nguyen, M. A. Hossain, 2009, RNA.

Using yeast genetics to study splicing mechanisms.

Tracy L. Johnson, M. A. Hossain, 2014, Methods in molecular biology.

Extensive splicing across the Saccharomyces cerevisiae genome

S. Douglass, Tracy L. Johnson, Calvin S. Leung, 2019, bioRxiv.

Chromatin-remodeling SWI/SNF complex regulates coenzyme Q6 synthesis and a metabolic shift to respiration in yeast

S. Douglass, S. Venkataramanan, C. Clarke, 2017, The Journal of Biological Chemistry.