Anthony J. Cesnik

发表

Spritz: A Proteogenomic Database Engine

Lei Lu, Michael R. Shortreed, Anthony J. Cesnik, 2020, bioRxiv.

Comprehensive in vivo identification of the c-Myc mRNA protein interactome using HyPR-MS

Anthony J. Cesnik, Lloyd M. Smith, M. Scalf, 2019, RNA.

Proteogenomics: Integrating Next-Generation Sequencing and Mass Spectrometry to Characterize Human Proteomic Variation.

Anthony J. Cesnik, Lloyd M. Smith, Gloria M. Sheynkman, 2016, Annual review of analytical chemistry.

Mapping the nucleolar proteome reveals a spatiotemporal organization related to intrinsic protein disorder

Anthony J. Cesnik, E. Lundberg, M. Uhlén, 2020, Molecular systems biology.

Mapping the nucleolar proteome reveals a spatiotemporal organization related to intrinsic protein disorder

Anthony J. Cesnik, E. Lundberg, M. Uhlén, 2020, bioRxiv.

Author Correction: Spatiotemporal dissection of the cell cycle with single-cell proteogenomics

Anthony J. Cesnik, Devin P. Sullivan, Nathan H. Cho, 2019, Nature.

Elucidating Proteoform Families from Proteoform Intact-Mass and Lysine-Count Measurements

Anthony J. Cesnik, Brian L. Frey, Lloyd M. Smith, 2016, Journal of proteome research.

Human Proteomic Variation Revealed by Combining RNA-Seq Proteogenomics and Global Post-Translational Modification (G-PTM) Search Strategy

Michael R. Shortreed, Anthony J. Cesnik, Brian L. Frey, 2015, Journal of proteome research.

Expanding Proteoform Identifications in Top-Down Proteomic Analyses by Constructing Proteoform Families.

Anthony J. Cesnik, Brian L. Frey, Lloyd M. Smith, 2018, Analytical chemistry.

In Situ and In Vivo Molecular Analysis by Coherent Raman Scattering Microscopy

Michael G. Roper, Anthony J. Cesnik, Lloyd M. Smith, 2016 .

Proteomics in non-human primates: utilizing RNA-Seq data to improve protein identification by mass spectrometry in vervet monkeys

Anthony J. Cesnik, Lloyd M. Smith, M. Olivier, 2017, BMC Genomics.

Bento: A toolkit for subcellular analysis of spatial transcriptomics data

Anthony J. Cesnik, H. Carter, E. Lundberg, 2023, bioRxiv.

Long Noncoding RNAs AC009014.3 and Newly Discovered XPLAID Differentiate Aggressive and Indolent Prostate Cancers

Anthony J. Cesnik, Brian L. Frey, Lloyd M. Smith, 2018, Translational oncology.

Electrochemical Synthesis of Binary and Ternary Niobium-Containing Oxide Electrodes Using the p-Benzoquinone/Hydroquinone Redox Couple.

Anthony J. Cesnik, Christopher M Papa, Kyoung-Shin Choi, 2015, Langmuir : the ACS journal of surfaces and colloids.

Analysis of the Human Protein Atlas Image Classification competition

Hao Xu, Wei Ouyang, Casper F Winsnes, 2019, Nature Methods.

Spatiotemporal dissection of the cell cycle with single-cell proteogenomics

Anthony J. Cesnik, Devin P. Sullivan, Nathan H. Cho, 2021, Nature.

HyPR-MS for Multiplexed Discovery of MALAT1, NEAT1, and NORAD lncRNA Protein Interactomes.

Anthony J. Cesnik, Lloyd M. Smith, M. Scalf, 2018, Journal of proteome research.

The Blood Proteoform Atlas: A reference map of proteoforms in human hematopoietic cells

Susan E. Abbatiello, Anthony J. Cesnik, Richard D. LeDuc, 2022, Science.

HyCCAPP as a tool to characterize promoter DNA-protein interactions in Saccharomyces cerevisiae.

Anthony J. Cesnik, Lloyd M. Smith, Eugene I. Drigalenko, 2016, Genomics.

Elucidating Escherichia coli Proteoform Families Using Intact-Mass Proteomics and a Global PTM Discovery Database.

Leah V Schaffer, Michael R Shortreed, Lloyd M Smith, 2017, Journal of proteome research.

Illuminating Non-genetic Cellular Heterogeneity with Imaging-Based Spatial Proteomics.

Anthony J. Cesnik, E. Lundberg, Christian Gnann, 2021, Trends in cancer.

Comprehensive Detection of Single Amino Acid Variants and Evaluation of Their Deleterious Potential in a PANC-1 Cell Line.

Michael R Shortreed, Liangliang Sun, Anthony J Cesnik, 2020, Journal of proteome research.

Proteomics Standards Initiative’s ProForma 2.0: Unifying the Encoding of Proteoforms and Peptidoforms

Anthony J. Cesnik, Joshua A. Klein, N. Kelleher, 2021, Journal of proteome research.

ProForma: A Standard Proteoform Notation.

Michael R Shortreed, Lloyd M Smith, Jared B Shaw, 2018, Journal of proteome research.

MetaNetwork Enhances Biological Insights from Quantitative Proteomics Differences by Combining Clustering and Enrichment Analyses.

Anthony J. Cesnik, Brian L. Frey, Lloyd M. Smith, 2022, Journal of proteome research.

Proteomics in non-human primates: utilizing RNA-Seq data to improve protein identification by mass spectrometry in vervet monkeys

Anthony J. Cesnik, Lloyd M. Smith, M. Olivier, 2017, BMC Genomics.

Bento: a toolkit for subcellular analysis of spatial transcriptomics data

Anthony J. Cesnik, H. Carter, E. Lundberg, 2023, bioRxiv.

Identification and Quantification of Murine Mitochondrial Proteoforms Using an Integrated Top-Down and Intact-Mass Strategy.

Leah V Schaffer, Michael R Shortreed, Lloyd M Smith, 2018, Journal of proteome research.

Spatiotemporal dissection of the cell cycle with single-cell proteogenomics

Lovisa Åkesson, Emma Lundberg, Anthony J. Cesnik, 2019, Nature.

Proteoform Suite: Software for Constructing, Quantifying, and Visualizing Proteoform Families.

Leah V Schaffer, Michael R Shortreed, Lloyd M Smith, 2018, Journal of proteome research.