S. Kojima

发表

Crystallization and preliminary X-ray diffraction analysis of Bacillus subtilis YwfE, an L-amino-acid ligase.

T. Tsuda, Tomomi Suzuki, S. Kojima, 2012, Acta crystallographica. Section F, Structural biology and crystallization communications.

Effects of chain length of an amphipathic polypeptide carrying the repeated amino acid sequence (LETLAKA)(n) on α-helix and fibrous assembly formation.

K. Hasegawa, K. Namba, K. Tsumoto, 2013, Biochemistry.

Dynamics of the three methionyl side chains of Streptomyces subtilisin inhibitor. Deuterium NMR studies in solution and in the solid state

A. Tamura, A. Naito, K. Miura, 1996, Protein science : a publication of the Protein Society.

Inhibitor‐assisted refolding of protease: A protease inhibitor as an intramolecular chaperone

H. Yanai, S. Kojima, Akane Iwahara, 2005, FEBS letters.

Structure analysis of the flavoredoxin from Desulfovibrio vulgaris Miyazaki F reveals key residues that discriminate the functions and properties of the flavin reductase family

Y. Higuchi, Y. Ueda, Daisuke Takeuchi, 2009, The FEBS journal.

Primary structure and inhibitory properties of a subtilisin-chymotrypsin inhibitor from Streptomyces virginiae.

S. Taguchi, K. Miura, H. Momose, 1994, European journal of biochemistry.

Streptomyces subtilisin inhibitor-like proteins are distributed widely in streptomycetes

S. Taguchi, K. Miura, H. Momose, 1993, Applied and environmental microbiology.

Isolation and partial characterization of SSI-like protease inhibitors from Streptomyces.

I. Kumagai, S. Taguchi, K. Miura, 1992, FEMS microbiology letters.

Analysis of the Isoform of Xenopus Euakryotic Translation Initiation Factor 4E

K. Miura, S. Kojima, H. Miyoshi, 2001, Bioscience, biotechnology, and biochemistry.

Requirement for hydrophobic Phe residues in Pleurotus ostreatus proteinase A inhibitor 1 for stable inhibition.

S. Kojima, Y. Hisano, 2002, Protein engineering.

Alteration of inhibitory properties of Pleurotus ostreatus proteinase A inhibitor 1 by mutation of its C-terminal region.

K. Miura, S. Kojima, Y. Hisano, 2001, Biochemical and biophysical research communications.

Disulfide bond formation is not involved in cap‐binding activity of Xenopus translation initiation factor eIF‐4E

K. Miura, S. Kojima, M. Wakiyama, 1997, FEBS letters.

Crystal structure of the AlbEF complex involved in subtilosin A biosynthesis.

S. Kojima, Kohki Ishida, Akira Nakamura, 2022, Structure.

Tertiary structure formation in the propeptide of subtilisin BPN' by successive amino acid replacements and its close relation to function.

K. Miura, S. Kojima, T. Minagawa, 1998, Journal of molecular biology.

The propeptide of subtilisin BPN′ as a temporary inhibitor and effect of an amino acid replacement on its inhibitory activity

K. Miura, S. Kojima, T. Minagawa, 1997, FEBS letters.

Alteration of the Specificity of the Streptomyces Subtilisin Inhibitor by Gene Engineering

I. Kumagai, K. Miura, S. Kojima, 1990, Bio/Technology.

Effects of amino acid replacements around the reactive site of chicken ovomucoid domain 3 on the inhibitory activity toward chymotrypsin and trypsin.

K. Miura, S. Kojima, T. Minagawa, 1999, Protein engineering.

Secretory production of chicken ovomucoid domain 3 by Escherichia coli and alteration of inhibitory specificity toward proteases by substitution of the P1 site residue.

I. Kumagai, K. Miura, S. Kojima, 1994, Gene.

Fibril Formation by an Amphipathic α-Helix-Forming Polypeptide Produced by Gene Engineering

Kin-ichiro Miura, Takao Yoshida, K. Miura, 1997 .

Involvement of the C-terminal region of yeast proteinase B inhibitor 2 in its inhibitory action.

K. Miura, S. Kojima, M. Deguchi, 1999, Journal of molecular biology.

Structure of POIA1, a homologous protein to the propeptide of subtilisin: implication for protein foldability and the function as an intramolecular chaperone.

H. Sasakawa, A. Tamura, S. Kojima, 2002, Journal of molecular biology.

Cloning and expression of the rubredoxin gene from Desulfovibrio vulgaris (Miyazaki F)--comparison of the primary structure of desulfoferrodoxin.

I. Kumagai, K. Miura, K. Kohno, 1997, Biochimica et biophysica acta.

Inhibitory specificity change of the ovomucoid third domain of the silver pheasant upon introduction of an engineered Cys14-Cys39 bond.

T. Yamazaki, Y. Kyōgoku, H. Yokosawa, 2003, Biochemistry.

Single mutation alters the substrate specificity of L-amino acid ligase.

T. Tsuda, S. Kojima, M. Asami, 2014, Biochemistry.

The amino acid sequence and interaction with the nucleosome core DNA of transition protein 4 from boar late spermatid nuclei.

K. Miura, K. Akama, M. Nakano, 1995, European journal of biochemistry.

Molecular Phylogenetic Characterization of Streptomyces Protease Inhibitor Family

S. Taguchi, K. Miura, H. Momose, 1997, Journal of Molecular Evolution.

Stabilization of the fibrous structure of an α-helix-forming peptide by sequence reversal

K. Miura, K. Yazaki, S. Kojima, 2005 .

Synthesis of alpha-helix-forming peptides by gene engineering methods and their characterization by circular dichroism spectra measurements.

S. Takahashi, I. Kumagai, K. Miura, 1996, Biochimica et biophysica acta.

Effect of an intersubunit disulfide bond on the stability of Streptomyces subtilisin inhibitor.

J. Sturtevant, K. Miura, S. Kojima, 1994, Biochemistry.

Mechanisms of temporary inhibition in Streptomyces subtilisin inhibitor induced by an amino acid substitution, tryptophan 86 replaced by histidine.

K. Kanaori, I. Kumagai, K. Miura, 1991, Biochemistry.

Increasing the hydrolysis constant of the reactive site upon introduction of an engineered Cys14Cys39 bond into the ovomucoid third domain from silver pheasant

H. Yokosawa, K. Miura, Yuji Kobayashi, 2011, Journal of peptide science : an official publication of the European Peptide Society.

Contribution of salt bridge in the protease inhibitor SSI (Streptomyces subtilisin inhibitor) to its inhibitory action

I. Kumagai, K. Miura, K. Fujimura, 1994, FEBS letters.

Molecular recognition at the active site of subtilisin BPN': crystallographic studies using genetically engineered proteinaceous inhibitor SSI (Streptomyces subtilisin inhibitor).

Y. Satow, S. Noguchi, I. Kumagai, 1994, Protein engineering.

Requirement for a disulfide bridge near the reactive site of protease inhibitor SSI (Streptomyces subtilisin inhibitor) for its inhibitory action.

I. Kumagai, K. Miura, S. Kojima, 1993, Journal of molecular biology.

Interaction of Streptomyces subtilisin inhibitor (SSI) with Streptomyces griseus metallo-endopeptidase II (SGMP II).

K. Miura, S. Kojima, S. Ishii, 1993, Journal of biochemistry.

New subtilisin-trypsin inhibitors produced by Streptomyces: primary structures and their relationship to other proteinase inhibitors from Streptomyces.

S. Taguchi, K. Miura, H. Momose, 1996, Biochimica et biophysica acta.

Primary structure and inhibitory properties of a proteinase inhibitor produced by Streptomyces cacaoi.

S. Taguchi, K. Miura, H. Momose, 1994, Biochimica et biophysica acta.

Effects of deletion in the flexible loop of the protease inhibitor SSI (Streptomyces subtilisin inhibitor) on interactions with proteases.

I. Kumagai, K. Miura, I Kumagai, 1993, Protein engineering.

High frequency of SSI-like protease inhibitors among Streptomyces.

I. Kumagai, S. Taguchi, K. Miura, 1993, Bioscience, biotechnology, and biochemistry.

Primary structure of Streptomyces griseus metalloendopeptidase II.

K. Miura, S. Kojima, S. Ishii, 1998, Bioscience, biotechnology, and biochemistry.

A novel member of the subtilisin-like protease family from Streptomyces albogriseolus

S. Taguchi, K. Miura, H. Momose, 1997, Journal of bacteriology.

Taxonomic characterization of closely related Streptomyces spp. based on the amino acid sequence analysis of protease inhibitor proteins.

S. Taguchi, K. Miura, H. Momose, 1996, FEMS microbiology letters.

A protease inhibitor produced by Streptomyces lividans 66 exhibits inhibitory activities toward both subtilisin BPN' and trypsin.

K. Tsumoto, I. Kumagai, K. Miura, 1992, Journal of biochemistry.

Inhibition of subtilisin BPN' by reaction site P1 mutants of Streptomyces subtilisin inhibitor.

I. Kumagai, K. Miura, Y. Nishiyama, 1991, Journal of biochemistry.

Effect of inhibitory activity of mutation at reaction site P4 of the Streptomyces subtilisin inhibitor, SSI.

I. Kumagai, K. Miura, S. Kojima, 1990, Protein engineering.

A thermodynamic study of mutant forms of Streptomyces subtilisin inhibitor. II. Replacements at the interface of dimer formation, Val13.

J. Sturtevant, K. Miura, S. Kojima, 1995, Journal of molecular biology.

A subtilisin inhibitor produced by Streptomyces bikiniensis possesses a glutamine residue at reactive site P1.

S. Taguchi, K. Miura, H. Momose, 1995, Journal of biochemistry.

Three novel subtilisin-trypsin inhibitors from Streptomyces: primary structures and inhibitory properties.

S. Taguchi, K. Miura, H. Momose, 1994, Journal of biochemistry.

Comparative studies on the primary structures and inhibitory properties of subtilisin-trypsin inhibitors from Streptomyces.

S. Taguchi, K. Miura, H. Momose, 1994, European journal of biochemistry.

Identification of amino acid residues responsible for the changes of absorption and fluorescence spectra on the binding of subtilisin BPN' and Streptomyces subtilisin inhibitor.

I. Kumagai, K. Inouye, B. Tonomura, 1993, Journal of biochemistry.

Interaction of subtilisin BPN' and recombinant Streptomyces subtilisin inhibitors with substituted P1 site residues.

K. Kanaori, T. Hatanaka, I. Kumagai, 1993, Journal of biochemistry.

Streptomyces serine protease (SAM-P20): recombinant production, characterization, and interaction with endogenous protease inhibitor

S. Taguchi, K. Miura, H. Momose, 1995, Journal of bacteriology.

interaction with endogenous protease inhibitor . recombinant production , characterization , and Streptomyces serine protease ( SAMP 20 ) :

S. Taguchi, K. Miura, H. Momose, 1995 .

Synthesis of a squash-type protease inhibitor by gene engineering and effects of replacements of conserved hydrophobic amino acid residues on its inhibitory activity.

K. Miura, K. Miyoshi, S. Kojima, 1996, Protein Engineering.

Accelerated refolding of subtilisin BPN' by tertiary-structure-forming mutants of its propeptide.

H. Yanai, K. Miura, S. Kojima, 2001, Journal of Biochemistry (Tokyo).

Achievement of renaturation of subtilisin BPN' by a novel procedure using organic salts and a digestible mutant of Streptomyces subtilisin inhibitor

E. Kurimoto, K. Miura, M. Matsubara, 1994, FEBS letters.

An endogenous target protease, SAM-P26, of Streptomyces protease inhibitor (SSI): primary structure, enzymatic characterization, and its interaction with SSI.

S. Taguchi, H. Momose, S. Kojima, 1998, Journal of biochemistry.

Methylene Blue Inhibits Formation of Tau Fibrils but not of Granular Tau Oligomers: A Plausible Key to Understanding Failure of a Clinical Trial for Alzheimer's Disease.

S. Maeda, A. Takashima, S. Kojima, 2019, Journal of Alzheimer's disease : JAD.

The structure of the third intracellular loop of the muscarinic acetylcholine receptor M2 subtype

M. Shirakawa, T. Haga, K. Haga, 2006, FEBS letters.

Functional tolerance of Streptomyces subtilisin inhibitor toward conformational and stability changes caused by single-point mutations in the hydrophobic core.

A. Tamura, M. Oda, K. Kanaori, 2002, Journal of Biochemistry (Tokyo).

Molecular Mechanisms of Urea Transport in Plants

A. Bohner, S. Kojima, N. Wirén, 2006, The Journal of Membrane Biology.

Renaturation of the mature subtilisin BPN' immobilized on agarose beads

K. Miura, D. Nohara, M. Matsubara, 1994, FEBS Letters.

High performance in refolding of Streptomyces griseus trypsin by the aid of a mutant of Streptomyces subtilisin inhibitor designed as trypsin inhibitor.

K. Miura, D. Nohara, M. Matsubara, 1999, Journal of biochemistry.

P1 specificity of aqualysin I (a subtilisin-type serine protease) from Thermus aquaticus YT-1, using P1-substituted derivatives of Streptomyces subtilisin inhibitor.

I. Kumagai, K. Miura, H. Matsuzawa, 1998, Bioscience, biotechnology, and biochemistry.

Partial Alteration of a Protein Streptomyces Subtilisin Inhibitor by Site-Directed Mutagenesis

I. Kumagai, S. Taguchi, K. Miura, 1988 .

The effects of the side chains of hydrophobic aliphatic amino acid residues in an amphipathic polypeptide on the formation of alpha helix and its association.

K. Miura, T. Takei, K. Yazaki, 2006, Journal of biochemistry.

pH responsiveness of fibrous assemblies of repeat‐sequence amphipathic α‐helix polypeptides

K. Tsumoto, K. Miura, T. Ueda, 2015, Protein science : a publication of the Protein Society.

Crystal structure of an engineered subtilisin inhibitor complexed with bovine trypsin.

T. Nonaka, K. Miura, Y. Mitsui, 1992, Proceedings of the National Academy of Sciences of the United States of America.

Role of positions e and g in the fibrous assembly formation of an amphipathic α‐helix‐forming polypeptide

K. Tsumoto, K. Miura, F. Arisaka, 2014, Biopolymers.

Expression of a zinc-binding domain of boar spermatidal transition protein 2 in Escherichia coli.

K. Miura, K. Akama, M. Nakano, 1999, Protein expression and purification.

The primary structure of pre-cytochrome c3 from Desulfovibrio vulgaris (Miyazaki F) as determined by nucleotide sequencing of its gene and partial amino acid sequencing

I. Kumagai, K. Miura, K. Ozawa, 1993 .

Development of a novel peptide inhibitor of subtilisin BPN′

M. Shimizu, S. Kojima, Y. Matsui, 2022, FEBS open bio.

Mapping the position of the transition state in the folding of a small α/β protein, POIA1

A. Tamura, S. Kojima, Shuhei Tanaka, 2004 .