Jitendra Maharana

发表

XSP10 and SlSAMT, Fusarium wilt disease responsive genes of tomato (Solanum lycopersicum L.) express tissue specifically and interact with each other at cytoplasm in vivo

K. P. Arunkumar, J. Debbarma, C. Chikkaputtaiah, 2021, Physiology and Molecular Biology of Plants.

Molecular recognition of avirulence protein (avrxa5) by eukaryotic transcription factor xa5 of rice (Oryza sativa L.): insights from molecular dynamics simulations.

Bikash R. Sahoo, M. Modi, B. Dehury, 2015, Journal of molecular graphics & modelling.

Deciphering the ATP-binding mechanism(s) in NLRP-NACHT 3D models using structural bioinformatics approaches

D. Panda, S. De, Jitendra Maharana, 2018, PloS one.

Identification of MDP (muramyl dipeptide)-binding key domains in NOD2 (nucleotide-binding and oligomerization domain-2) receptor of Labeo rohita

Bikash R. Sahoo, M. Dikhit, M. Samanta, 2012, Fish Physiology and Biochemistry.

Poly I:C stimulation in-vitro as a marker for an antiviral response in different cell types generated from Buffalo (Bubalus bubalis).

S. De, D. Werling, Jitendra Maharana, 2020, Molecular immunology.

Draft Genome Sequence of the Extremely Halophilic Bacterium Halomonas salina Strain CIFRI1, Isolated from the East Coast of India

Shambhu Nath Mandal, V. Scaria, S. Sivasubbu, 2015, Genome Announcements.

Structural insights of rohu TLR3, its binding site analysis with fish reovirus dsRNA, poly I:C and zebrafish TRIF.

Bikash R. Sahoo, M. Dikhit, M. Samanta, 2012, International journal of biological macromolecules.

Structural and functional insights into CARDs of zebrafish (Danio rerio) NOD1 and NOD2, and their interaction with adaptor protein RIP2.

Bikash R. Sahoo, S. K. Pradhan, D. Panda, 2015, Molecular bioSystems.

Structural Models of Zebrafish (Danio rerio) NOD1 and NOD2 NACHT Domains Suggest Differential ATP Binding Orientations: Insights from Computational Modeling, Docking and Molecular Dynamics Simulations

Sushma Rani Martha, Bikash R. Sahoo, S. K. Pradhan, 2015, PloS one.

Mechanism Underlying Heat Stability of the Rice Endosperm Cytosolic ADP-Glucose Pyrophosphorylase

Aytug Tuncel, T. Okita, Seon-Kap Hwang, 2019, Front. Plant Sci..

Structural insights into the MDP binding and CARD–CARD interaction in zebrafish (Danio rerio) NOD2: a molecular dynamics approach

S. K. Pradhan, S. De, M. C. Patra, 2014, Journal of molecular recognition : JMR.

Structural Elucidation of Inter-CARD Interfaces involved in NOD2 Tandem CARD Association and RIP2 Recognition.

S. K. Pradhan, D. Panda, S. De, 2021, The journal of physical chemistry. B.

Structural investigation of Indica rice ( Oryza sativa L.) DREB1 AP2 domain in response to GCC-BOX DNA: an insight from molecular dynamics

S. K. Pradhan, G. R. Rout, Jitendra Maharana, 2017 .

Further insights on structural modifications of muramyl dipeptides to study the human NOD2 stimulating activity.

P. Liang, Jitendra Maharana, W. Cheng, 2020, Chemistry, an Asian journal.

Molecular characterization constitutive expression and GTP binding mechanism in Cirrhinus mrigala (Hamilton, 1822) Myxovirus resistance (Mx) protein: A molecular dynamics approach.

B. Das, B. Behera, Jitendra Maharana, 2019, International journal of biological macromolecules.

SlHyPRP1 and DEA1, the multiple stress responsive eight-cysteine motif family genes of tomato (Solanum lycopersicum L.) are expressed tissue specifically, localize and interact at cytoplasm and plasma membrane in vivo

K. P. Arunkumar, J. Debbarma, C. Chikkaputtaiah, 2020, Physiology and Molecular Biology of Plants.

POP1 might be recruiting its type‐Ia interface for NLRP3‐mediated PYD‐PYD interaction: Insights from MD simulation

S. De, Jitendra Maharana, A. Vats, 2017, Journal of molecular recognition : JMR.

Understanding the distinguishable structural and functional features in zebrafish TLR3 and TLR22, and their binding modes with fish dsRNA viruses: an exploratory structural model analysis

Bikash R. Sahoo, S. K. Lenka, M. Dikhit, 2014, Amino Acids.

Structural Analysis of Respirasomes in Electron Transfer Pathway of Acidithiobacillus ferrooxidans: A Computer-Aided Molecular Designing Study

S. K. Pradhan, M. C. Patra, S. Rath, 2013 .

Functional Screening and Molecular Characterization of Halophilic and Halotolerant Bacteria by 16S rRNA Gene Sequence Analysis

A. Rao, B. Mohanty, T. Sahu, 2015, Proceedings of the National Academy of Sciences, India Section B: Biological Sciences.

Molecular dynamics simulation of human serum paraoxonase 1 in DPPC bilayer reveals a critical role of transmembrane helix H1 for HDL association

S. K. Pradhan, S. De, M. C. Patra, 2013, European Biophysics Journal.

Computational insights into the binding mechanism of antagonists with neuropeptide B/W receptor 1.

S. De, M. C. Patra, B. Dehury, 2014, Molecular bioSystems.

Identification of MDP (muramyl dipeptide)-binding key domains in NOD2 (nucleotide-binding and oligomerization domain-2) receptor of Labeo rohita

Bikash R. Sahoo, M. Dikhit, M. Samanta, 2013, Fish Physiology and Biochemistry.

6-Shogaol Exhibits Anti-viral and Anti-inflammatory Activity in COVID-19-Associated Inflammation by Regulating NLRP3 Inflammasomes

S. Chattopadhyay, P. Mamidi, S. Mukherjee, 2023, ACS omega.

Spectroscopic and computational insights into theophylline/β-cyclodextrin complexation: inclusion accomplished by diverse methods

Subhraseema Das, U. Subuddhi, Jitendra Maharana, 2018, Journal of microencapsulation.

Understanding the distinguishable structural and functional features in zebrafish TLR3 and TLR22, and their binding modes with fish dsRNA viruses: an exploratory structural model analysis

Bikash R. Sahoo, S. K. Lenka, M. Dikhit, 2014, Amino Acids.

NOD1CARD Might Be Using Multiple Interfaces for RIP2-Mediated CARD-CARD Interaction: Insights from Molecular Dynamics Simulation

S. K. Pradhan, S. De, Jitendra Maharana, 2017, PloS one.

Harnessing tissue-specific genome editing in plants through CRISPR/Cas system: current state and future prospects

C. Chikkaputtaiah, Dhanawantari L. Singha, Jitendra Maharana, 2021, Planta.

CRISPR/Cas9-Mediated Mutation in XSP10 and SlSAMT Genes Impart Genetic Tolerance to Fusarium Wilt Disease of Tomato (Solanum lycopersicum L.)

K. P. Arunkumar, P. S. Reddy, J. Debbarma, 2023, Genes.

Functional Screening and Molecular Characterization of Halophilic and Halotolerant Bacteria by 16S rRNA Gene Sequence Analysis

A. Rao, B. Mohanty, T. Sahu, 2015, Proceedings of the National Academy of Sciences, India Section B: Biological Sciences.

Structural bioinformatics insights into ATP binding mechanism in zebrafish (Danio rerio) cyclin‐dependent kinase‐like 5 (zCDKL5) protein

B. Dehury, B. Das, B. Behera, 2019, Journal of cellular biochemistry.

Structural and dynamic investigation of bovine folate receptor alpha (FOLR1), and role of ultra-high temperature processing on conformational and thermodynamic characteristics of FOLR1-folate complex.

Bikash R. Sahoo, S. K. Pradhan, S. K. Lenka, 2014, Colloids and surfaces. B, Biointerfaces.

A conformational analysis of mouse Nalp3 domain structures by molecular dynamics simulations, and binding site analysis.

S. K. Pradhan, S. K. Lenka, M. C. Patra, 2014, Molecular bioSystems.

Structure-Based Computational Study of Two Disease Resistance Gene Homologues (Hm1 and Hm2) in Maize (Zea mays L.) with Implications in Plant-Pathogen Interactions

M. Modi, M. C. Patra, B. Dehury, 2014, PloS one.

Exploration of the binding modes of buffalo PGRP1 receptor complexed with meso-diaminopimelic acid and lysine-type peptidoglycans by molecular dynamics simulation and free energy calculation.

Bikash R. Sahoo, S. K. Pradhan, S. K. Lenka, 2014, Chemico-biological interactions.

Computational studies on receptor-ligand interactions between novel buffalo (Bubalus bubalis) nucleotide-binding oligomerization domain-containing protein 2 (NOD2) variants and muramyl dipeptide (MDP).

S. De, M. C. Patra, S. Ahlawat, 2016, Journal of molecular graphics & modelling.

Molecular dynamics simulation of neuropeptide B and neuropeptide W in the dipalmitoylphosphatidylcholine membrane bilayer

S. K. Pradhan, M. C. Patra, S. Rath, 2014, Journal of biomolecular structure & dynamics.

Molecular dynamics simulation of human serum paraoxonase 1 in DPPC bilayer reveals a critical role of transmembrane helix H1 for HDL association

S. K. Pradhan, S. De, M. C. Patra, 2013, European Biophysics Journal.

Understanding the thermal response of rice eukaryotic transcription factor eIF4A1 towards dynamic temperature stress: insights from expression profiling and molecular dynamics simulation

D. Panda, M. Modi, B. Dehury, 2020, Journal of biomolecular structure & dynamics.

Elucidating the interfaces involved in CARD-CARD interactions mediated by NLRP1 and Caspase-1 using molecular dynamics simulation.

Jitendra Maharana, 2018, Journal of molecular graphics & modelling.

Structural and functional investigation of zebrafish (Danio rerio) NOD1 leucine rich repeat domain and its interaction with iE-DAP.

Bijay Kumar Behera, Aritra Bej, Bikash R. Sahoo, 2014, Molecular bioSystems.

Insight into Buffalo (Bubalus bubalis) RIG1 and MDA5 Receptors: A Comparative Study on dsRNA Recognition and In-Vitro Antiviral Response

S. De, M. C. Patra, Jitendra Maharana, 2014, PloS one.

Deep insights into the mode of ATP-binding mechanism in Zebrafish cyclin-dependent protein kinase-like 1 (zCDKL1): A molecular dynamics approach.

C. Nayak, B. Dehury, B. Das, 2018, Journal of molecular graphics & modelling.

Genetic Diversity of Asian Sea Bass, Lates calcarifer (Bloch) Populations in India Revealed by Randomly Amplified Polymorphic DNA

Anil Sharma, P. Das, B. Behera, 2014, Proceedings of the National Academy of Sciences, India Section B: Biological Sciences.

Microwave-assisted β-cyclodextrin/chrysin inclusion complexation: An economical and green strategy for enhanced hemocompatibility and chemosensitivity in vitro

Subhraseema Das, U. Subuddhi, Jitendra Maharana, 2020 .

Exploration of the binding modes of buffalo PGRP1 receptor complexed with meso-diaminopimelic acid and lysine-type peptidoglycans by molecular dynamics simulation and free energy calculation.

Bikash R. Sahoo, S. K. Pradhan, S. K. Lenka, 2014, Chemico-biological interactions.

S. De, M. C. Patra, S. Ahlawat, 2016, Journal of molecular graphics & modelling.

CRISPR/Cas9-based genome editing and functional analysis of SlHyPRP1 and SlDEA1 genes of Solanum lycopersicum L. in imparting genetic tolerance to multiple stress factors

J. Debbarma, C. Chikkaputtaiah, Banashree Saikia, 2024, Frontiers in Plant Science.

Computational insights into the binding mechanism of antagonists with neuropeptide B/W receptor 1.

M. C. Patra, B. Dehury, Jitendra Maharana, 2014, Molecular bioSystems.

Structural insights into the MDP binding and CARD–CARD interaction in zebrafish (Danio rerio) NOD2: a molecular dynamics approach

S. K. Pradhan, S. De, M. C. Patra, 2014, Journal of molecular recognition : JMR.