Tong Li

Computational de novo design of antibodies binding to a peptide with high affinity

Klaus Schulten, Costas D Maranas, Boon Chong Goh, 2017, Biotechnology and bioengineering.

Thermodynamic stability and flexibility characteristics of antibody fragment complexes.

Dennis R Livesay, Deeptak Verma, Donald J Jacobs, 2013, Protein and peptide letters.

Insight into ligand selectivity in HCV NS5B polymerase: molecular dynamics simulations, free energy decomposition and docking

Piet Herdewijn, Matheus Froeyen, P. Herdewijn, 2010, Journal of molecular modeling.

OptMAVEn – A New Framework for the de novo Design of Antibody Variable Region Models Targeting Specific Antigen Epitopes

Costas D. Maranas, Robert J. Pantazes, C. Maranas, 2014, PloS one.

Computational alanine scanning and free energy decomposition for E. coli type I signal peptidase with lipopeptide inhibitor complex.

Piet Herdewijn, Matheus Froeyen, Tong Li, 2008, Journal of molecular graphics & modelling.

Mutational effects on the catalytic mechanism of cellobiohydrolase I from Trichoderma reesei.

Lishan Yao, Shihai Yan, L. Yao, 2011, The journal of physical chemistry. B.

Redistribution of Flexibility in Stabilizing Antibody Fragment Mutants Follows Le Châtelier’s Principle

Malgorzata B. Tracka, Shahid Uddin, Donald J. Jacobs, 2014, PloS one.