A. Fritz

发表

Temporal dynamic reorganization of 3D chromatin architecture in hormone-induced breast cancer and endocrine resistance

R. Schiff, S. Frietze, Shili Lin, 2019, Nature Communications.

SMARCA4 regulates gene expression and higher-order chromatin structure in proliferating mammary epithelial cells

Job Dekker, Janet L Stein, Gary S Stein, 2016, Genome research.

C‐ing the Genome: A Compendium of Chromosome Conformation Capture Methods to Study Higher‐Order Chromatin Organization

S. K. Zaidi, Janet L Stein, Gary S Stein, 2016, Journal of cellular physiology.

Alterations in replication timing of cancer‐related genes in malignant human breast cancer cells

N. Marella, R. Berezney, S. Sinha, 2013, Journal of cellular biochemistry.

Chromosome territories and the global regulation of the genome

Jinhui Xu, R. Berezney, A. Pliss, 2019, Genes, chromosomes & cancer.

Intranuclear and higher‐order chromatin organization of the major histone gene cluster in breast cancer

S. K. Zaidi, G. Stein, J. Lian, 2018, Journal of cellular physiology.

Chromosomes at Work: Organization of Chromosome Territories in the Interphase Nucleus

S. K. Zaidi, G. Stein, J. Lian, 2016, Journal of cellular biochemistry.

Non‐Random Patterns in the Distribution of NOR‐Bearing Chromosome Territories in Human Fibroblasts: A Network Model of Interactions

Jinhui Xu, L. Mukherjee, R. Berezney, 2015, Journal of cellular physiology.

Gene density and chromosome territory shape

Jinhui Xu, R. Berezney, Irianna Torres, 2014, Chromosoma.

Inhibition of the RUNX1-CBFβ transcription factor complex compromises mammary epithelial cell identity: a phenotype potentially stabilized by mitotic gene bookmarking

S. K. Zaidi, Nicole A. Bouffard, G. Stein, 2020, Oncotarget.

The Prolyl Isomerase Pin1 Targets Stem-Loop Binding Protein (SLBP) To Dissociate the SLBP-Histone mRNA Complex Linking Histone mRNA Decay with SLBP Ubiquitination

R. Berezney, N. Krishnan, R. Thapar, 2012, Molecular and Cellular Biology.

Higher order genomic organization and regulatory compartmentalization for cell cycle control at the G1/S‐phase transition

G. Stein, J. Lian, P. Ghule, 2018, Journal of cellular physiology.

RUNX1 mitotically bookmarks target genes that are important for the mammary epithelial-to-mesenchymal transition

S. K. Zaidi, Nicole A. Bouffard, G. Stein, 2019, bioRxiv.

Large-scale probabilistic 3D organization of human chromosome territories.

Jinhui Xu, Sambit Bhattacharya, Hu Ding, 2016, Human molecular genetics.

Finding rigid sub-structure patterns from 3D point-sets

Jinhui Xu, Hu Ding, Nitasha Sehgal, 2016, 2016 23rd International Conference on Pattern Recognition (ICPR).

Mining k-median chromosome association graphs from a population of heterogeneous cells

Xiangyu Wang, Jinhui Xu, Hu Ding, 2015, BCB.

Wide-scale alterations in interchromosomal organization in breast cancer cells: defining a network of interacting chromosomes.

Jinhui Xu, Sambit Bhattacharya, Hu Ding, 2014, Human molecular genetics.

Cell Type Specific Alterations in Interchromosomal Networks across the Cell Cycle

Jinhui Xu, Sambit Bhattacharya, Hu Ding, 2014, PLoS Comput. Biol..

Gene density and chromosome territory shape

Jinhui Xu, R. Berezney, Irianna Torres, 2014, Chromosoma.

RUNX1‐dependent mechanisms in biological control and dysregulation in cancer

S. K. Zaidi, G. Stein, J. Lian, 2018, Journal of cellular physiology.

Selective expression of long non‐coding RNAs in a breast cancer cell progression model

G. Stein, J. Lian, J. Stein, 2018, Journal of cellular physiology.

Nuclear organization mediates cancer-compromised genetic and epigenetic control.

S. K. Zaidi, G. Stein, J. Lian, 2018, Advances in biological regulation.

Higher order genomic organization and epigenetic control maintain cellular identity and prevent breast cancer

S. K. Zaidi, G. Stein, J. Lian, 2019, Genes, chromosomes & cancer.

Epithelial‐to‐mesenchymal transition and cancer stem cells contribute to breast cancer heterogeneity

S. K. Zaidi, G. Stein, J. Lian, 2018, Journal of cellular physiology.

RUNX1 mitotically bookmarks target genes that are important for the mammary epithelial-to-mesenchymal transition

S. K. Zaidi, Nicole A. Bouffard, G. Stein, 2019, bioRxiv.

RUNX1 and RUNX2 transcription factors function in opposing roles to regulate breast cancer stem cells

S. K. Zaidi, G. Stein, J. Lian, 2020, Journal of cellular physiology.

Suppression of Breast Cancer Stem Cells and Tumor Growth by the RUNX1 Transcription Factor

G. Stein, J. Lian, J. Stein, 2018, Molecular Cancer Research.

Assembly of the SLIP1-SLBP complex on histone mRNA requires heterodimerization and sequential binding of SLBP followed by SLIP1.

Y. Lyubchenko, R. Berezney, R. Thapar, 2013, Biochemistry.

Identification of tRNA‐derived small RNA (tsRNA) responsive to the tumor suppressor, RUNX1, in breast cancer

G. Stein, J. Lian, C. Croce, 2020, Journal of cellular physiology.

Chromatic kernel and its applications

Lei Xu, Jinhui Xu, Hu Ding, 2016, J. Comb. Optim..

Computing Maximum Association Graph in Microscopic Nucleus Images

Jinhui Xu, Branislav Stojkovic, Ronald Berezney, 2010, MICCAI.

Runx1 stabilizes the mammary epithelial cell phenotype and prevents epithelial to mesenchymal transition

G. Stein, J. Lian, J. Dobson, 2017, Oncotarget.

Runx 1 stabilizes the mammary epithelial cell phenotype and prevents epithelial to mesenchymal transition

G. Stein, J. Lian, J. Dobson, 2017 .

SMARCA4 regulates gene expression and higher-order chromatin structure in proliferating mammary epithelial cells

G. Stein, J. Lian, J. Dekker, 2016, Genome research.

SMARCA 4 regulates gene expression and higher-order chromatin structure in proliferating mammary epithelial cells

G. Stein, J. Lian, J. Dekker, 2016 .