B. Xia

发表

C-terminal domain of SARS-CoV main protease can form a 3D domain-swapped dimer

C. Jin, Z. Rao, Z. Lou, 2009, Protein science : a publication of the Protein Society.

Iron-Sulfur Proteins: Investigations of Hyperfine-Shifted Hydrogen, Carbon, and Nitrogen Resonances

W. M. Westler, J. Markley, Hong Cheng, 1996 .

Activation and maturation of SARS-CoV main protease

X. Kang, B. Xia, 2011, Protein & Cell.

Peptidyl-prolyl isomerization targets rice Aux/IAAs for proteasomal degradation during auxin signalling

Xiaolu Yang, Q. Qian, Guojun Dong, 2015, Nature Communications.

GapR binds DNA through dynamic opening of its tetrameric interface

Xian-zhi Dong, S. Fan, B. Xia, 2020, Nucleic acids research.

Glutathione regulates the transfer of iron-sulfur cluster from monothiol and dithiol glutaredoxins to apo ferredoxin

J. Jacquot, N. Rouhier, Yingang Feng, 2012, Protein & Cell.

Characterization of acid-induced protein conformational changes and noncovalent complexes in solution by using coldspray ionization mass spectrometry

Ruiping Zhang, Jiuming He, Z. Abliz, 2009, Journal of the American Society for Mass Spectrometry.

Silencing of foreign DNA in bacteria.

Jun Liu, W. Navarre, B. Xia, 2012, Current opinion in microbiology.

Letter to the Editor: 1H, 13C, and 15N resonance assignments of the N-terminal domain of the SARS CoV nucleocapsid protein

C. Jin, N. Zhong, B. Xia, 2005, Journal of biomolecular NMR.

Amino acid residues in Anabaena ferredoxin crucial to interaction with ferredoxin-NADP+ reductase: site-directed mutagenesis and laser flash photolysis.

Z. Salamon, G. Tollin, J. Markley, 1993, Biochemistry.

Structural insight into poplar glutaredoxin C1 with a bridging iron-sulfur cluster at the active site.

C. Jin, J. Jacquot, N. Rouhier, 2006, Biochemistry.

Redox-Dependent Magnetic Alignment of Clostridium pasteurianum Rubredoxin: Measurement of Magnetic Susceptibility Anisotropy and Prediction of Pseudocontact Shift Contributions

Andrew L. Lee, W. M. Westler, J. Markley, 1999 .

NMR Investigations of Clostridium pasteurianum Rubredoxin. Origin of Hyperfine 1H, 2H, 13C, and 15N NMR Chemical Shifts in Iron−Sulfur Proteins As Determined by Comparison of Experimental Data with Hybrid Density Functional Calculations†

W. M. Westler, J. Markley, F. Weinhold, 1998 .

AMPLIFICATION OF ONE-BOND 1H/2H ISOTOPE EFFECTS ON 15N CHEMICAL SHIFTS IN CLOSTRIDIUM PASTEURIANUM RUBREDOXIN BY FERMI-CONTACT EFFECTS THROUGH HYDROGE N BONDS

W. M. Westler, J. Markley, S. J. Wilkens, 1998 .

Optical, EPR, and 1H NMR spectroscopy of serine-ligated [2Fe-2S] ferredoxins produced by site-directed mutagenesis of cysteine residues in recombinant Anabaena 7120 vegetative ferredoxin.

G. H. Reed, J. Markley, H. Cheng, 1994, Biochemistry.

Dissection of Influenza A Virus M1 Protein: pH-Dependent Oligomerization of N-Terminal Domain and Dimerization of C-Terminal Domain

Ke Zhang, Wenjun Liu, B. Xia, 2012, PloS one.

The Bacillus subtilis YkuV Is a Thiol:Disulfide Oxidoreductase Revealed by Its Redox Structures and Activity*

Xianrong Guo, C. Jin, E. Lescop, 2006, Journal of Biological Chemistry.

Proline isomerization of the immune receptor-interacting protein RIN4 by a cyclophilin inhibits effector-triggered immunity in Arabidopsis.

Jian-Min Zhou, Qianhua Shen, Dong Liu, 2014, Cell host & microbe.

Assignment of 1H, 13C, and 15N signals of reduced Clostridium pasteurianum rubredoxin: Oxidation state-dependent changes in chemical shifts and relaxation rates

J. Markley, B. Volkman, A. M. Prantner, 1997, Journal of biomolecular NMR.

Is amyloid fibrillation related to 3D domain swapping for the C-terminal domain of SARS-CoV main protease?

X. Kang, B. Xia, B. Duan, 2012, International Journal of Biological Macromolecules.

1H, 13C, and 15N resonance assignments of the N-terminal domain of human TIG3

C. Jin, B. Xia, Wenyu Yu, 2012, Biomolecular NMR Assignments.

Chemical Reaction Intermediate State Kinetic Optimization by Particle Swarm Optimization

Bin Xia, Fei Tan, B. Xia, 2018, ICSI.

Conserved regulatory elements in AMPK

Zhi-Xin Wang, P. Li, D. Neumann, 2013, Nature.

NMR Approaches to the Study of Structure-Function Relationships in Iron-Sulfur Proteins

B. Fox, W. M. Westler, J. Markley, 1996 .

Human ferredoxin: overproduction in Escherichia coli, reconstitution in vitro, and spectroscopic studies of iron-sulfur cluster ligand cysteine-to-serine mutants.

G. H. Reed, J. Markley, V. Bandarian, 1996, Biochemistry.

Iron-sulfur cluster cysteine-to-serine mutants of Anabaena -2Fe-2S- ferredoxin exhibit unexpected redox properties and are competent in electron transfer to ferredoxin:NADP+ reductase.

A. E. Hodges, G. Tollin, J. Markley, 1997, Biochemistry.

Solution structure of Escherichia coli glutaredoxin-2 shows similarity to mammalian glutathione-S-transferases.

P E Wright, H. Dyson, P. Wright, 2001, Journal of molecular biology.

Structural, Biochemical, and Dynamic Characterizations of the hRPB8 Subunit of Human RNA Polymerases*

Luhua Lai, Bin Xia, Xianrong Guo, 2006, Journal of Biological Chemistry.

Solution structure of the N‐terminal catalytic domain of human H‐REV107 – A novel circular permutated NlpC/P60 domain

C. Jin, B. Xia, Jian Lin, 2010, FEBS letters.

Distinguishing transgenic from non-transgenic Arabidopsis plants by (1)H NMR-based metabolic fingerprinting.

L. Qu, Tao Wang, B. Xia, 2009, Journal of genetics and genomics = Yi chuan xue bao.

Automics: an integrated platform for NMR-based metabonomics spectral processing and data analysis

Tao Wang, Bin Xia, Jie He, 2009, BMC Bioinformatics.

1H, 13C, and 15N resonance assignments of the N-terminal domain of human TIG3

C. Jin, B. Xia, Wenyu Yu, 2012, Biomolecular NMR assignments.

Crystal structure of the novel di-nucleotide cyclase from Vibrio cholerae (DncV) responsible for synthesizing a hybrid cyclic GMP-AMP

Yuna Sun, Dazhi Jin, Z. Lou, 2014, Cell Research.

Solution Structure of a Low-Molecular-Weight Protein Tyrosine Phosphatase from Bacillus subtilis

C. Jin, B. Xia, Huimin Xu, 2006, Journal of bacteriology.

Solution structure and backbone dynamics of an endopeptidase HycI from Escherichia coli: implications for mechanism of the [NiFe] hydrogenase maturation.

C. Jin, Fan Yang, Wei-Shou Hu, 2006, The Journal of biological chemistry.

Solution Structures and Backbone Dynamics of a Flavodoxin MioC from Escherichia coli in both Apo- and Holo-forms

Xianrong Guo, C. Jin, B. Xia, 2006, Journal of Biological Chemistry.

Excessive ER-phagy mediated by the autophagy receptor FAM134B results in ER stress, the unfolded protein response, and cell death in HeLa cells

Xinmin Zhang, B. Xia, B. Duan, 2019, The Journal of Biological Chemistry.

1H, 13C and 15N resonance assignments of rhodanese GlpE from Escherichia coli

Hongwei Li, C. Jin, B. Xia, 2011, Biomolecular NMR assignments.

Solution structures and backbone dynamics of Escherichia coli rhodanese PspE in its sulfur-free and persulfide-intermediate forms: implications for the catalytic mechanism of rhodanese.

Hongwei Li, C. Jin, Fan Yang, 2008, Biochemistry.

Xenogeneic Silencing and Bacterial Genome Evolution: Mechanisms for DNA Recognition Imply Multifaceted Roles of Xenogeneic Silencers

Jun Liu, W. Navarre, B. Xia, 2021, Molecular biology and evolution.

How bacterial xenogeneic silencer rok distinguishes foreign from self DNA in its resident genome

T. Hughes, Jun Liu, W. Navarre, 2018, Nucleic acids research.

A Novel AT-Rich DNA Recognition Mechanism for Bacterial Xenogeneic Silencer MvaT

T. Hughes, Ally Yang, Jun Liu, 2015, PLoS pathogens.

Structural basis for recognition of AT-rich DNA by unrelated xenogeneic silencing proteins

Atina G. Coté, T. Hughes, M. Weirauch, 2011, Proceedings of the National Academy of Sciences.

Structural basis for the phosphorylation of FUNDC1 LIR as a molecular switch of mitophagy

Quan Chen, Yushan Zhu, B. Xia, 2016, Autophagy.

Foldon unfolding mediates the interconversion between Mpro-C monomer and 3D domain-swapped dimer

C. Jin, Peng Zou, N. Zhong, 2012, Proceedings of the National Academy of Sciences.

Solution Structure of an Antifreeze Protein CfAFP-501 from Choristoneura fumiferana

Z. Jia, Xianrong Guo, C. Jin, 2005, Journal of biomolecular NMR.

NMR Characterizations of the Ice Binding Surface of an Antifreeze Protein

Z. Jia, C. Jin, Congmin Li, 2010, PloS one.

Periplasmic Protein HdeA Exhibits Chaperone-like Activity Exclusively within Stomach pH Range by Transforming into Disordered Conformation*

Weizhe Hong, Junrui Zhang, Xinmiao Fu, 2005, Journal of Biological Chemistry.

Dynamics of the conformational transitions in the assembling of the Michaelis complex of a bisubstrate enzyme: a (15)N relaxation study of Escherichia coli 6-hydroxymethyl-7,8-dihydropterin pyrophosphokinase.

Honggao Yan, C. Jin, E. Lescop, 2009, Biochemistry.

Multinuclear Magnetic Resonance and Mutagenesis Studies of Structure-Function Relationships in [2Fe-2S] Ferredoxins

B. Oh, W. M. Westler, J. Markley, 1995 .

Structure-function studies of [2Fe-2S] ferredoxins

B. Oh, G. Tollin, J. Markley, 1994, Journal of bioenergetics and biomembranes.

Solution structure of GSP13 from Bacillus subtilis exhibits an S1 domain related to cold shock proteins

C. Jin, Wei Xia, Bingke Yu, 2009, Journal of biomolecular NMR.

1H, 13C, and 15N resonance assignments of a general stress protein GSP13 from Bacillus subtilis

C. Jin, Wei Xia, Bingke Yu, 2008, Biomolecular NMR assignments.

Site-specific mutagenesis demonstrates that the structural requirements for efficient electron transfer in Anabaena ferredoxin and flavodoxin are highly dependent on the reaction partner: kinetic studies with photosystem I, ferredoxin:NADP+ reductase, and cytochrome c.

M. Fillat, M. A. De la Rosa, M. Hervás, 1995, Archives of biochemistry and biophysics.

Solution Structures and Backbone Dynamics of Arsenate Reductase from Bacillus subtilis

Bin Xia, Congmin Li, Xianrong Guo, 2005, Journal of Biological Chemistry.

Zn(II) can mediate self-association of the extracellular C-terminal domain of CD147

Hongwei Li, B. Xia, P. Ding, 2017, Protein & Cell.

CD147 functions as the signaling receptor for extracellular divalent copper in hepatocellular carcinoma cells

Zhi-Nan Chen, B. Xia, P. Ding, 2017, OncoTarget.

Structure-function relationships in Anabaena ferredoxin: correlations between X-ray crystal structures, reduction potentials, and rate constants of electron transfer to ferredoxin:NADP+ reductase for site-specific ferredoxin mutants.

G. Tollin, J. Markley, J. Thoden, 1997, Biochemistry.

Solution structure of human zeta-COP: direct evidences for structural similarity between COP I and clathrin-adaptor coats.

C. Jin, B. Xia, Wenyu Yu, 2009, Journal of molecular biology.

The role of aromatic and acidic amino acids in the electron transfer reaction catalyzed by spinach ferredoxin-dependent glutamate synthase.

Z. Salamon, G. Tollin, J. Markley, 1998, Biochimica et biophysica acta.

An aromatic amino acid is required at position 65 in Anabaena ferredoxin for rapid electron transfer to ferredoxin:NADP+ reductase

G. Tollin, J. Markley, M. Medina, 1993 .

An electrochemical, kinetic, and spectroscopic characterization of [2Fe-2S] vegetative and heterocyst ferredoxins from Anabaena 7120 with mutations in the cluster binding loop.

G. Tollin, J. Markley, M. Stankovich, 1998, Archives of biochemistry and biophysics.

Without Its N-Finger, the Main Protease of Severe Acute Respiratory Syndrome Coronavirus Can Form a Novel Dimer through Its C-Terminal Domain

C. Jin, Peng Zou, N. Zhong, 2008, Journal of Virology.

Without its N-Finger , SARS-CoV Main Protease 1 can Form a Novel Dimer through its C-Terminal Domain 2 3

C. Jin, Peng Zou, N. Zhong, 2008 .

Cyclophilin A (CyPA) Induces Chemotaxis Independent of Its Peptidylprolyl Cis-Trans Isomerase Activity

N. Zhong, Zhi-Nan Chen, Jian-Li Jiang, 2011, The Journal of Biological Chemistry.

Detection and classification of hyperfine-shifted 1H, 2H, and 15N resonances of the Rieske ferredoxin component of toluene 4-monooxygenase.

B. Fox, W. M. Westler, J. Markley, 1999, Biochemistry.

The Solution Structure of Escherichia coli Wzb Reveals a Novel Substrate Recognition Mechanism of Prokaryotic Low Molecular Weight Protein-tyrosine Phosphatases*

C. Jin, E. Lescop, Wei-Shou Hu, 2006, Journal of Biological Chemistry.

Protein engineering for the elucidation of the mechanism of electron transfer in redox proteins.

G. Tollin, J. Markley, M. Medina, 1994, Biochemical Society transactions.

Structure and Novel Functional Mechanism of Drosophila SNF in Sex-Lethal Splicing

L. Lai, C. Jin, Congmin Li, 2009, PloS one.

Hyperfine-Shifted 13C and 15N NMR Signals from Clostridium pasteurianum Rubredoxin: Extensive Assignments and Quantum Chemical Verification

W. M. Westler, J. Markley, T. Machonkin, 2009, Journal of the American Chemical Society.

Solution structure and catalytic mechanism of human protein histidine phosphatase 1.

Weibin Gong, Bin Xia, Changwen Jin, 2009, The Biochemical journal.

Three-dimensional domain swapping as a mechanism to lock the active conformation in a super-active octamer of SARS-CoV main protease

C. Jin, Z. Lou, N. Zhong, 2010, Protein & Cell.

Assignment of 1H, 13C, and 15N signals of oxidized Clostridium pasteurianum rubredoxin

J. Markley, B. Volkman, S. J. Wilkens, 1997, Journal of biomolecular NMR.

An efficient method for refolding the extracellular portion of CD147 from the total bacterial lysate.

Zhi-Nan Chen, Xin Zhang, B. Xia, 2011, Acta biochimica et biophysica Sinica.

CD147 functions as the signaling receptor for extracellular divalent copper in hepatocellular carcinoma cells.

Zhi-Nan Chen, B. Xia, P. Ding, 2017, Oncotarget.

Comparison of protein solution structures refined by molecular dynamics simulation in vacuum, with a generalized Born model, and with explicit water

Bin Xia, Peter E Wright, H Jane Dyson, 2002, Journal of biomolecular NMR.

Solution structure of monomeric human FAM96A

Yang Luo, B. Xia, Jian Lin, 2013, Journal of biomolecular NMR.

Solution structure of the cryptic mannitol-specific phosphotransferase enzyme IIA CmtB from Escherichia coli.

C. Jin, B. Xia, You Li, 2007, Biochemical and biophysical research communications.

Conformational Fluctuations Coupled to the Thiol-Disulfide Transfer between Thioredoxin and Arsenate Reductase in Bacillus subtilis*

Bin Xia, Yunfei Hu, Huimin Xu, 2007, Journal of Biological Chemistry.

Solution structure of Escherichia coli HypC.

C. Jin, B. Xia, Lei Wang, 2007, Biochemical and biophysical research communications.

Identification and Solution Structures of a Single Domain Biotin/Lipoyl Attachment Protein from Bacillus subtilis*

C. Jin, Beiyan Nan, G. Cui, 2006, Journal of Biological Chemistry.

Reversible conformational switch revealed by the redox structures of Bacillus subtilis thiol peroxidase.

C. Jin, Fan Yang, B. Xia, 2008, Biochemical and biophysical research communications.

DNA binding mechanism of WhiB4 from Mycobacterium tuberculosis

B. Xia, Qiran Zhai, Lu-Sha Zhang, 2021, Magnetic Resonance Letters.

LEC–BiFC: a new method for rapid assay of protein interaction

S. Li, Z. Liu, Y. Li, 2011, Biotechnic & histochemistry : official publication of the Biological Stain Commission.

Detection and Classification of Hyperfine-Shifted 1H, 2H, and 15N Resonances from the Four Cysteines That Ligate Iron in Oxidized and Reduced Clostridium pasteurianum Rubredoxin

W. M. Westler, J. Markley, J. Moulis, 1995 .

Solution structure of the Escherichia coli HybE reveals a novel fold

C. Jin, B. Xia, Yunfei Hu, 2009, Proteins.

Solution NMR structure of the TatA component of the twin-arginine protein transport system from gram-positive bacterium Bacillus subtilis.

Hongwei Li, C. Jin, B. Xia, 2010, Journal of the American Chemical Society.

Mutations of surface residues in Anabaena vegetative and heterocyst ferredoxin that affect thermodynamic stability as determined by guanidine hydrochloride denaturation

G. Tollin, J. Markley, H. Holden, 1995, Protein science : a publication of the Protein Society.

Solution structure and conformational heterogeneity of acylphosphatase from Bacillus subtilis

C. Jin, Dan Li, X. Su, 2010, FEBS letters.

Solution structure of synbindin atypical PDZ domain and interaction with syndecan-2.

W. Gong, Yingang Feng, Zhiyi Wei, 2009, Protein and peptide letters.

Selective Nonmethylated CpG DNA Recognition Mechanism of Cysteine Clamp Domains.

Xian-zhi Dong, B. Xia, P. Ding, 2021, Journal of the American Chemical Society.

Structures of Anabaena Calcium-binding Protein CcbP

C. Jin, X. Su, Jindong Zhao, 2011, The Journal of Biological Chemistry.

Protein expression, selective isotopic labeling, and analysis of hyperfine-shifted NMR signals of Anabaena 7120 vegetative [2Fe-2S]ferredoxin.

B. Oh, W. M. Westler, J. Markley, 1995, Archives of biochemistry and biophysics.

1H, 13C and 15N resonance assignments of the chaperone HybE of hydrogenase-2 from Escherichia coli

C. Jin, B. Xia, X. Shao, 2009, Biomolecular NMR assignments.

Structural basis for recognition of AT-rich DNA by unrelated xenogeneic silencing proteins

Atina G. Coté, T. Hughes, M. Weirauch, 2011, Proceedings of the National Academy of Sciences.

First structure of the polymyxin resistance proteins.

C. Jin, Fan Yang, X. Kang, 2007, Biochemical and biophysical research communications.

Solution structure of the bacterial chemotaxis adaptor protein CheW from Escherichia coli.

C. Jin, B. Xia, Yunfei Hu, 2007, Biochemical and biophysical research communications.

Evidence for oxidation-state-dependent conformational changes in human ferredoxin from multinuclear, multidimensional NMR spectroscopy.

J. Markley, B. Volkman, B. Xia, 1998, Biochemistry.

Multinuclear magnetic resonance and mutagenesis studies of the histidine residues of human mitochondrial ferredoxin.

J. Markley, V. Coghlan, B. Xia, 1995, Biochemistry.

Inadequacies of the Point-Dipole Approximation for Describing Electron-Nuclear Interactions in Paramagnetic Proteins: Hybrid Density Functional Calculations and the Analysis of NMR Relaxation of High-Spin Iron(III) Rubredoxin

W. M. Westler, J. Markley, B. Volkman, 1998 .

Without Its N-Finger, the Main Protease of Severe Acute Respiratory Syndrome Coronavirus Can Form a Novel Dimer through Its C-Terminal Domain

C. Jin, Peng Zou, N. Zhong, 2008, Journal of Virology.

1H, 13C, and 15N resonance assignments of human phosphohistidine phosphatase 1 (PHPT1)

C. Jin, G. Cui, B. Xia, 2007, Biomolecular NMR assignments.