A. Chakrabarti

发表

A systems view of spliceosomal assembly and branchpoints with iCLIP

Christopher R. Sibley, J. Ule, N. Luscombe, 2018, bioRxiv.

The up-to-date management of venous thromboembolism.

A. Chakrabarti, 2015, Clinical medicine.

P. Molyneaux, J. Jacob, A. Devaraj, 2016 .

A computationally-enhanced hiCLIP atlas reveals Staufen1-RNA binding features and links 3′ UTR structure to RNA metabolism

J. Ule, N. Luscombe, I. Iosub, 2022, bioRxiv.

An evaluation of the use of a negative interferon-&ggr; release assay for tuberculosis screening before TNF antagonist therapy

A. Pozniak, M. Loebinger, A. Chakrabarti, 2014, European Respiratory Journal.

Target-Specific Precision of CRISPR-Mediated Genome Editing

Anob M. Chakrabarti, Nicholas M. Luscombe, N. Luscombe, 2018, bioRxiv.

Prevalence of Aspergillus sensitisation in pulmonary tuberculosis-related fibrocavitary disease.

A. Aggarwal, R. Agarwal, D. Gupta, 2014, The international journal of tuberculosis and lung disease : the official journal of the International Union against Tuberculosis and Lung Disease.

TDP-43 condensation properties specify its RNA-binding and regulatory repertoire

Nicolas L. Fawzi, J. Ule, N. Luscombe, 2021, Cell.

Reactive astrocytes in ALS display diminished intron retention

N. Luscombe, O. Ziff, G. Kelly, 2021, Nucleic acids research.

Heteromeric RNP Assembly at LINEs Controls Lineage-Specific RNA Processing

J. Ule, N. Luscombe, C. Gooding, 2018, Cell.

A systems view of spliceosomal assembly and branchpoints with iCLIP

Christopher R. Sibley, Andrea S. Elser, J. Ule, 2019, Nature Structural & Molecular Biology.

Using hiCLIP to identify RNA duplexes that interact with a specific RNA-binding protein

J. Ule, N. Luscombe, A. Chakrabarti, 2017, Nature Protocols.

Reduced microRNA-150 is associated with poor survival in pulmonary arterial hypertension.

L. Huson, H. Ghofrani, R. Schermuly, 2013, American journal of respiratory and critical care medicine.

A systems view of spliceosomal assembly and branchpoints with iCLIP

Christopher R. Sibley, Andrea S. Elser, J. Ule, 2019, Nature Structural & Molecular Biology.

Data Science Issues in Studying Protein-RNA Interactions with CLIP Technologies.

Nejc Haberman, Anob M. Chakrabarti, Nicholas M. Luscombe, 2018, Annual review of biomedical data science.

1 A systems view of spliceosomal assembly and branchpoints with iCLIP 1 2

Christopher R. Sibley, Andrea S. Elser, N. Luscombe, 2019 .

clipplotr—a comparative visualization and analysis tool for CLIP data

J. Ule, N. Luscombe, Charlotte Capitanchik, 2021, bioRxiv.

RGS4 RNA Secondary Structure Mediates Staufen2 RNP Assembly in Neurons

J. Ule, N. Luscombe, M. Kiebler, 2021, International journal of molecular sciences.

Data Science Issues in Understanding Protein-RNA Interactions

Nejc Haberman, Anob M. Chakrabarti, Nicholas M. Luscombe, 2017, bioRxiv.

An improved iCLIP protocol

Christopher R. Sibley, J. Ule, J. König, 2021, bioRxiv.

Progress in the understanding and management of pulmonary arterial hypertension

J. Mitchell, S. Wort, A. Chakrabarti, 2015, Global cardiology science & practice.

Mechanisms of disease Progress in the understanding and management of pulmonary arterial hypertension

S. Wort, J. Mitchell, A. Chakrabarti, 2015 .

P. Molyneaux, A. Devaraj, F. Chua, 2016 .

Publisher Correction: A systems view of spliceosomal assembly and branchpoints with iCLIP

Christopher R. Sibley, Andrea S. Elser, J. Ule, 2021, Nature Structural & Molecular Biology.

Integrated transcriptome landscape of ALS identifies genome instability linked to TDP-43 pathology

A. Al-Chalabi, O. Ziff, S. Boulton, 2023, Nature communications.

Nucleocytoplasmic mRNA redistribution accompanies RNA binding protein mislocalization in ALS motor neurons and is restored by VCP ATPase inhibition

O. Ziff, M. Skehel, R. Patani, 2023, Neuron.

Mutual homeostasis of charged proteins

Stefan L Ameres, J. Ule, I. Iosub, 2023, bioRxiv.

m6a methylation orchestrates IMP1 regulation of microtubules during human neuronal differentiation

T. Roumeliotis, Raphaëlle Luisier, R. Patani, 2024, bioRxiv.

Using hiCLIP to identify RNA duplexes that interact with a specific RNA-binding protein

J. Ule, N. Luscombe, A. Chakrabarti, 2017, Nature Protocols.

Nucleocytoplasmic mRNA redistribution accompanies RNA binding protein mislocalization in ALS motor neurons and is restored by VCP ATPase inhibition

O. Ziff, M. Skehel, R. Patani, 2023, Neuron.

Transcriptome-wide profiling of mammalian spliceosome and branchpoints with iCLIP

Christopher R. Sibley, N. Luscombe, J. König, 2018 .

Reduced microRNA-150 is associated with poor survival in pulmonary arterial hypertension.

L. Huson, H. Ghofrani, R. Schermuly, 2013, American journal of respiratory and critical care medicine.

nf-core/clipseq - a robust Nextflow pipeline for comprehensive CLIP data analysis

J. Ule, N. Luscombe, Charlotte Capitanchik, 2023, Wellcome open research.