D. Nilov

发表

Bifunctional Inhibitors of Influenza Virus Neuraminidase: Molecular Design of a Sulfonamide Linker

V. Svedas, S. Evteev, D. Nilov, 2021, International journal of molecular sciences.

Structure Modeling of Human Tyrosyl-DNA Phosphodiesterase 1 and Screening for Its Inhibitors

V. Svedas, O. Lavrik, A. Zakharenko, 2017, Acta naturae.

Modeling of the Enzyme—Substrate Complexes of Human Poly(ADP-Ribose) Polymerase 1

V. Svedas, K. Kirsanov, D. Nilov, 2020, Biochemistry (Moscow).

Improved procedure of the search for poly(ADP-Ribose) polymerase-1 potential inhibitors with the use of the molecular docking approach

V. Svedas, S. Khodyreva, O. Lavrik, 2011, Molecular Biology.

Molecular modeling of formate dehydrogenase: the formation of the Michaelis complex

V. Svedas, V. Popov, I. Shabalin, 2012, Journal of biomolecular structure & dynamics.

Bioinformatic Analysis of the Nicotinamide Binding Site in Poly(ADP-Ribose) Polymerase Family Proteins

V. Svedas, D. Suplatov, D. Nilov, 2021, Cancers.

The Sharpless Asymmetric Aminohydroxylation - Scope and Limitation

O. Reiser, D. Nilov, 2002 .

Construction of a Full-Atomic Mechanistic Model of Human Apurinic/Apyrimidinic Endonuclease APE1 for Virtual Screening of Novel Inhibitors 

V. Svedas, D. Nilov, I. Khaliullin, 2012, Acta naturae.

Toxicological Properties of 7-Methylguanine, and Preliminary Data on its Anticancer Activity

V. Svedas, K. Kirsanov, E. Lesovaya, 2022, Frontiers in Pharmacology.

Inhibitory Effect of New Semisynthetic Usnic Acid Derivatives on Human Tyrosyl-DNA Phosphodiesterase 1

V. Svedas, O. Lavrik, N. Salakhutdinov, 2018, Planta Medica.

Design, Synthesis, and Molecular Docking Study of New Tyrosyl-DNA Phosphodiesterase 1 (TDP1) Inhibitors Combining Resin Acids and Adamantane Moieties

V. Svedas, O. Lavrik, N. Salakhutdinov, 2021, Pharmaceuticals.

Isolation and Biochemical Characterization of Recombinant Transketolase from Mycobacterium tuberculosis

M. Shumkov, D. Nilov, I. Gushchina, 2022, Acta naturae.

Inhibitory Effects of 7-Methylguanine and Its Metabolite 8-Hydroxy-7-Methylguanine on Human Poly(ADP-Ribose) Polymerase 1

V. Poroikov, V. Svedas, O. Lavrik, 2022, Biochemistry. Biokhimiia.

Tyrosyl-DNA Phosphodiesterase 1 Inhibitors: Usnic Acid Enamines Enhance the Cytotoxic Effect of Camptothecin.

V. Svedas, O. Lavrik, N. Salakhutdinov, 2016, Journal of natural products.

2,5-Diketopiperazines: A New Class of Poly(ADP-ribose)polymerase Inhibitors

O. Lavrik, A. Zakharenko, M. V. Sukhanova, 2018, Biochemistry (Moscow).

Mechanisms of Nucleosome Reorganization by PARP1

Md. Sohail Akhtar, M. Kirpichnikov, J. Pascal, 2021, International Journal of Molecular Sciences.

Modeling the Structure of Human tRNA-Guanine Transglycosylase in Complex with 7-Methylguanine and Revealing the Factors that Determine the Enzyme Interaction with Inhibitors

V. Svedas, D. Nilov, S. Pushkarev, 2022, Biochemistry (Moscow).

Recent Advances on the Sharpless Asymmetric Aminohydroxylation

O. Reiser, D. Nilov, 2003 .

Catalytic Cycle of Penicillin Acylase from Escherichia coli: QM/MM Modeling of Chemical Transformations in the Enzyme Active Site upon Penicillin G Hydrolysis

V. Svedas, B. Grigorenko, A. Nemukhin, 2014 .

Inhibitory Effects of 7-Methylguanine and Its Metabolite 8-Hydroxy-7-Methylguanine on Human Poly(ADP-Ribose) Polymerase 1

V. Poroikov, V. Svedas, O. Lavrik, 2022, Biochemistry (Moscow).

Molecular Mechanisms of PARP-1 Inhibitor 7-Methylguanine

V. Svedas, V. Studitsky, O. Lavrik, 2020, International journal of molecular sciences.

7-Methylguanine Traps PARP-1 on Nucleosomes: spFRET Microscopy Study

V. Studitsky, A. Feofanov, N. Gerasimova, 2019, Microscopy and Microanalysis.

Inhibition of Poly(ADP-Ribose) Polymerase by Nucleic Acid Metabolite 7-Methylguanine

V. Svedas, O. Lavrik, V. Tararov, 2016, Acta naturae.

Requirement for Serine-384 in Caspase-2 processing and activity

B. Zhivotovsky, M. Turkina, D. Nilov, 2020, Cell Death & Disease.

2,5-Diketopiperazines: A New Class of Poly(ADP-ribose)polymerase Inhibitors

V. Svedas, O. Lavrik, A. Zakharenko, 2018, Biochemistry (Moscow).

Modeling of the Enzyme—Substrate Complexes of Human Poly(ADP-Ribose) Polymerase 1

V. Svedas, K. Kirsanov, D. Nilov, 2020, Biochemistry (Moscow).

The role of Tyr102 residue in the functioning of bacterial NAD+-dependent formate dehydrogenase of Pseudomonas sp. 101.

V. V. Khrustalev, D. Dibrova, K. Boyko, 2022, Biochemical and biophysical research communications.

Identification of New Structural Fragments for the Design of Lactate Dehydrogenase A Inhibitors

V. Svedas, D. Nilov, A. Kulikov, 2016, Acta naturae.

Search for Human Lactate Dehydrogenase A Inhibitors Using Structure-Based Modeling

V. Svedas, D. Nilov, E. Prokhorova, 2015, Acta naturae.

Natural Guanine Derivatives Exert PARP-Inhibitory and Cytoprotective Effects in a Model of Cardiomyocyte Damage under Oxidative Stress

V. Svedas, V. Silnikov, S. Shram, 2023, Biochemistry (Moscow).

vsFilt: A Tool to Improve Virtual Screening by Structural Filtration of Docking Poses

Dmitry A Suplatov, Vytas K Švedas, Irina V Gushchina, 2020, J. Chem. Inf. Model..

Inhibitory Effect of New Semisynthetic Usnic Acid Derivatives on Human Tyrosyl-DNA Phosphodiesterase 1

V. Svedas, O. Lavrik, N. Salakhutdinov, 2018, Planta Medica.