N. Lewis

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Phylogenetic Analysis of H5N8 Highly Pathogenic Avian Influenza Viruses in Ukraine, 2016-2017.

M. Bezymennyi, E. Bortz, M. Sapachova, 2021, Vector borne and zoonotic diseases.

A Phylogeny-Based Global Nomenclature System and Automated Annotation Tool for H1 Hemagglutinin Genes from Swine Influenza A Viruses

Tavis K. Anderson, R. Scheuermann, C. Macken, 2016, mSphere.

Detection of Highly Pathogenic Avian Influenza Virus H5N1 Clade 2.3.4.4b in Great Skuas: A Species of Conservation Concern in Great Britain

S. Reid, I. Brown, G. Tyler, 2022, Viruses.

An Epizootiological Report of the Re‐emergence and Spread of a Lineage of Virulent Newcastle Disease Virus into Eastern Europe

R. Fouchier, I. Brown, S. van Boheemen, 2017, Transboundary and emerging diseases.

Transatlantic spread of highly pathogenic avian influenza H5N1 by wild birds from Europe to North America in 2021

M. Beer, T. Kuiken, K. Thorup, 2022, Scientific Reports.

Updated unified phylogenetic classification system and revised nomenclature for Newcastle disease virus

B. Lambrecht, I. Brown, M. Berg, 2019, Infection, genetics and evolution : journal of molecular epidemiology and evolutionary genetics in infectious diseases.

Substitutions near the Hemagglutinin Receptor-Binding Site Determine the Antigenic Evolution of Influenza A H3N2 Viruses in U.S. Swine

Tavis K. Anderson, A. Vincent, D. Burke, 2014, Journal of Virology.

Emergence and spread of novel H5N8, H5N5 and H5N1 clade 2.3.4.4 highly pathogenic avian influenza in 2020

M. Beer, R. Fouchier, S. Reid, 2021, Emerging microbes & infections.

Antigenic Characterization and Pandemic Risk Assessment of North American H1 Influenza A Viruses Circulating in Swine

R. Rothman, A. Pekosz, K. Shaw-Saliba, 2022, bioRxiv.

Interspecies Transmission from Pigs to Ferrets of Antigenically Distinct Swine H1 Influenza A Viruses with Reduced Reactivity to Candidate Vaccine Virus Antisera as Measures of Relative Zoonotic Risk

Tavis K. Anderson, David E. Hufnagel, C. Davis, 2022, Viruses.

The Molecular Determinants of Antibody Recognition and Antigenic Drift in the H3 Hemagglutinin of Swine Influenza A Virus

Tavis K. Anderson, A. Vincent, P. Gauger, 2016, Journal of Virology.

Regional Transmission and Reassortment of 2.3.4.4b Highly Pathogenic Avian Influenza (HPAI) Viruses in Bulgarian Poultry 2017/18

I. Brown, R. Ellis, A. Brouwer, 2020, bioRxiv.

Interspecies transmission from pigs to ferrets of antigenically distinct swine H1 influenza A viruses with loss in reactivity to human vaccine virus antisera as measures of relative zoonotic risk

Tavis K. Anderson, David E. Hufnagel, C. Davis, 2022, bioRxiv.

Characterization of co-circulating swine influenza A viruses in North America and the identification of a novel H1 genetic clade with antigenic significance.

Tavis K. Anderson, A. Vincent, M. Nelson, 2015, Virus research.

Co-circulation of genetically distinct highly pathogenic avian influenza A clade 2.3.4.4 (H5N6) viruses in wild waterfowl and poultry in Europe and East Asia, 2017–18

M. Beer, M. Steensels, B. Lambrecht, 2019, Virus evolution.

Characterization of a novel reassortant H5N6 highly pathogenic avian influenza virus clade 2.3.4.4 in Korea, 2017

I. Brown, Yu-Na Lee, Eun-Kyoung Lee, 2018, Emerging Microbes & Infections.

Antigenic and genetic variations in European and North American equine influenza virus strains (H3N8) isolated from 2006 to 2007.

J. Daly, C. Russell, S. Macrae, 2009, Veterinary microbiology.

A threat from both sides: Multiple introductions of genetically distinct H5 HPAI viruses into Canada via both East Asia-Australasia/Pacific and Atlantic flyways.

I. Brown, Y. Berhane, T. Alkie, 2022, Virus evolution.

JMM Profile: Avian influenza: a veterinary pathogen with zoonotic potential.

S. Reid, N. Lewis, Joe James, 2022, Journal of medical microbiology.

Active wild bird surveillance of avian influenza viruses, a report

Z. Javakhishvili, R. Fouchier, J. Waldenström, 2022, EFSA Supporting Publications.

Surveillance of European Domestic Pig Populations Identifies an Emerging Reservoir of Potentially Zoonotic Swine Influenza A Viruses.

M. Beer, Dinah Henritzi, E. Starick, 2020, Cell host & microbe.

Prevalence of Avian Influenza A(H5) and A(H9) Viruses in Live Bird Markets, Bangladesh

Younjung Kim, D. Pfeiffer, I. Brown, 2018, Emerging infectious diseases.

Encephalitis and Death in Wild Mammals at a Rehabilitation Center after Infection with Highly Pathogenic Avian Influenza A(H5N8) Virus, United Kingdom

S. Reid, I. Brown, N. Lewis, 2021, Emerging infectious diseases.

Detection of Clade 2.3.4.4b Avian Influenza A(H5N8) Virus in Cambodia, 2021

I. Barr, Ammar Aziz, L. Izzard, 2023, Emerging infectious diseases.

Development of a surveillance scheme for equine influenza in the UK and characterisation of viruses isolated in Europe, Dubai and the USA from 2010-2012.

J. Daly, J. Mumford, J. McCauley, 2014, Veterinary microbiology.

Quantifying Antigenic Relationships among the Lyssaviruses

A. Osterhaus, J. Wood, R. Fouchier, 2010, Journal of Virology.

Antigenic and genetic evolution of contemporary swine H1 influenza viruses in the United States.

Tavis K. Anderson, Amy L. Vincent, Nicola S. Lewis, 2018, Virology.

The global antigenic diversity of swine influenza A viruses

Tavis K. Anderson, Paul Kellam, Takehiko Saito, 2016, eLife.

Genetic and antigenic characterization of H1 influenza viruses from United States swine from 2008

A. Vincent, M. Gramer, Derek J. Smith, 2011, The Journal of general virology.

Detection of H3N8 influenza A virus with multiple mammalian-adaptive mutations in a rescued Grey seal (Halichoerus grypus) pup

S. Reid, I. Brown, C. Bianco, 2019, bioRxiv.

Avian influenza viruses in wild birds: virus evolution in a multi-host 1 ecosystem 2

T. Stockwell, H. van Bakel, T. Bestebroer, 2018 .

Drivers of airborne human-to-human pathogen transmission

B. Karo, J. Steel, C. Russell, 2016, Current Opinion in Virology.

Substitutions Near the Receptor Binding Site Determine Major Antigenic Change During Influenza Virus Evolution

D. Burke, I. Barr, A. Osterhaus, 2013, Science.

Comparative micro-epidemiology of pathogenic avian influenza virus outbreaks in a wild bird population

O. Pybus, K. Parag, C. Perrins, 2019, Philosophical Transactions of the Royal Society B.

Systemic infection with highly pathogenic H5N8 of avian origin produces encephalitis and mortality in wild mammals at a UK rehabilitation centre

S. Reid, I. Brown, N. Lewis, 2021, bioRxiv.

Review of Influenza A Virus in Swine Worldwide: A Call for Increased Surveillance and Research

R. Webby, M. Peiris, A. Vincent, 2014, Zoonoses and public health.

Australian equine influenza: vaccine protection in the uk

A. Rash, N. Bryant, D. Elton, 2008, Veterinary Record.

Highly Pathogenic Avian Influenza Viruses at the Wild–Domestic Bird Interface in Europe: Future Directions for Research and Surveillance

R. Fouchier, J. Verhagen, N. Lewis, 2021, Viruses.

Comparison of two modern vaccines and previous influenza infection against challenge with an equine influenza virus from the Australian 2007 outbreak

E. Medcalf, A. Rash, N. Bryant, 2009, Veterinary research.

Evolution and Antigenic Advancement of N2 Neuraminidase of Swine Influenza A Viruses Circulating in the United States following Two Separate Introductions from Human Seasonal Viruses

Tavis K. Anderson, A. Vincent, D. Pérez, 2021, Journal of virology.

Characterization of contemporary 2010.1 H3N2 swine influenza A viruses circulating in United States pigs.

Tavis K. Anderson, A. Vincent, P. Gauger, 2020, Virology.

Swine Influenza A Viruses and the Tangled Relationship with Humans.

Tavis K. Anderson, C. Davis, A. Vincent, 2020, Cold Spring Harbor perspectives in medicine.

Quantifying the Impact of Immune Escape on Transmission Dynamics of Influenza

Andrew W Park, Bryan T Grenfell, B. Grenfell, 2009, Science.

Global circulation patterns of seasonal influenza viruses vary with antigenic drift

Trevor Bedford, Colin A. Russell, Derek J. Smith, 2015, Nature.

Antigenic and Genetic Evolution of Equine Influenza A (H3N8) Virus from 1968 to 2007

D. Burke, J. Wood, J. Daly, 2011, Journal of Virology.

Influenza A virus evolution and spatio-temporal dynamics in Eurasian wild birds: a phylogenetic and phylogeographical study of whole-genome sequence data

Timothy B. Stockwell, Gavin J. D. Smith, T. Stockwell, 2015, The Journal of general virology.

Improving pandemic influenza risk assessment

James O Lloyd-Smith, Sebastian Maurer-Stroh, Samuel S. Shepard, 2014, eLife.

Novel Reassortant Human-Like H3N2 and H3N1 Influenza A Viruses Detected in Pigs Are Virulent and Antigenically Distinct from Swine Viruses Endemic to the United States

Tavis K. Anderson, Amy L. Vincent, Nicola S. Lewis, 2015, Journal of Virology.

Avian Influenza Virus Surveillance in Wild Birds in Georgia: 2009–2011

Z. Javakhishvili, Derek J. Smith, R. Fouchier, 2013, PloS one.

Global evolution of influenza A viruses in swine

R. Webby, A. Vincent, N. Lewis, 2016 .

The type of adjuvant in whole inactivated influenza a virus vaccines impacts vaccine-associated enhanced respiratory disease.

A. Vincent, P. Gauger, D. Rajão, 2018, Vaccine.

Comparative virulence of wild-type H1N1pdm09 influenza A isolates in swine.

Tavis K. Anderson, A. Vincent, D. Rajão, 2015, Veterinary microbiology.

Novel reassortant human-like H 3 N 2 and H 3 N 1 influenza A viruses detected in pigs 1 are virulent and antigenically distinct from endemic viruses 2

Tavis K. Anderson, P. Gauger, D. Pérez, 2015 .

Influenza A virus vaccines for swine.

Tavis K. Anderson, Rasna R. Walia, A. Vincent, 2017, Veterinary microbiology.

H9N2 avian influenza virus dispersal along Bangladeshi poultry trading networks

J. Raghwani, S. Hill, G. Fournié, 2023, Virus evolution.

Characterization of H1N1 Swine Influenza Viruses Circulating in Canadian Pigs in 2009

A. Vincent, J. Pasick, Y. Berhane, 2011, Journal of Virology.

Has Epizootic Become Enzootic? Evidence for a Fundamental Change in the Infection Dynamics of Highly Pathogenic Avian Influenza in Europe, 2021

M. Beer, M. Steensels, L. Larsen, 2022, mBio.

Intercontinental spread of Asian-origin H7 avian influenza viruses by captive bird trade in 1990's.

I. Brown, Y. Berhane, M. Killian, 2019, Infection, genetics and evolution : journal of molecular epidemiology and evolutionary genetics in infectious diseases.

Outbreak Severity of Highly Pathogenic Avian Influenza A(H5N8) Viruses Is Inversely Correlated to Polymerase Complex Activity and Interferon Induction

R. Fouchier, C. Russell, D. Eggink, 2020, Journal of Virology.

Antigenic Distance between North American Swine and Human Seasonal H3N2 Influenza A Viruses as an Indication of Zoonotic Risk to Humans

Tavis K. Anderson, A. Vincent, R. Rothman, 2021, Journal of virology.

OFFLU swine influenza experts develop global nomenclature system and automated annotation tool for H1 haemagglutinin genes of influenza A viruses

R. Scheuermann, C. Macken, A. Vincent, 2017 .

Comparison of 2016–17 and Previous Epizootics of Highly Pathogenic Avian Influenza H5 Guangdong Lineage in Europe

A. Breed, I. Brown, C. Hjulsager, 2018, Emerging infectious diseases.

Plasticity of Amino Acid Residue 145 Near the Receptor Binding Site of H3 Swine Influenza A Viruses and Its Impact on Receptor Binding and Antibody Recognition

A. Vincent, D. Burke, L. Ferreri, 2018, Journal of Virology.

Swine-to-Ferret Transmission of Antigenically Drifted Contemporary Swine H3N2 Influenza A Virus Is an Indicator of Zoonotic Risk to Humans

Tavis K. Anderson, David E. Hufnagel, C. Davis, 2023, Viruses.