Xinzhou Ge

发表

DORGE: Discovery of Oncogenes and tumoR suppressor genes using Genetic and Epigenetic features

J. Li, Jianzhong Su, Jie Lyu, 2020, Science Advances.

DORGE: Discovery of Oncogenes and tumoR suppressor genes using Genetic and Epigenetic features

J. Li, Jianzhong Su, Jie Lyu, 2020, Science Advances.

EpiAlign: an alignment-based bioinformatic tool for comparing chromatin state sequences

Soo Bin Kwon, J. Li, Haowen Zhang, 2019, bioRxiv.

APIR: a universal FDR-control framework for boosting peptide identification power by aggregating multiple proteomics database search algorithms

Leo D. Wang, S. Ficarro, J. Li, 2021 .

Exaggerated false positives by popular differential expression methods when analyzing human population samples

J. Li, Wei Li, Fanglue Peng, 2022, Genome Biology.

Clipper: p-value-free FDR control on high-throughput data from two conditions

Jingyi Jessica Li, Dongyuan Song, Wei Li, 2020, Genome Biology.

A remark on copy number variation detection methods

Minping Qian, Ruiqi Gao, Lin Wan, 2018, PloS one.

Wilcoxon rank-sum test still outperforms dearseq after accounting for the normalization impact in semi-synthetic RNA-seq data simulation

J. Li, Wei Li, Fanglue Peng, 2022, bioRxiv.

METTL3-Mediated m6A Modification Controls Splicing Factor Abundance and Contributes to Aggressive CLL.

J. Li, L. Ghoda, S. Fernandes, 2023, Blood cancer discovery.

Clipper: p-value-free FDR control on high-throughput data from two conditions

Leo D. Wang, J. Li, A. Manousopoulou, 2021, Genome Biology.

DreamAI: algorithm for the imputation of proteomics data

Thomas Yu, Shrabanti Chowdhury, Jun Zhu, 2020, bioRxiv.

ClusterDE: a post-clustering differential expression (DE) method robust to false-positive inflation caused by double dipping

J. Li, Xinzhou Ge, Dongyuan Song, 2023, bioRxiv.

A large-sample crisis? Exaggerated false positives by popular differential expression methods

J. Li, W. Li, Fanglue Peng, 2021, bioRxiv.