Tzong-Yi Lee

发表

EXPath 2.0: An Updated Database for Integrating High-Throughput Gene Expression Data with Biological Pathways.

Song-Bin Chang, W. Chang, Kuan-Chieh Tseng, 2020, Plant & cell physiology.

Characterization and Identification of Natural Antimicrobial Peptides on Different Organisms

Jorng-Tzong Horng, Tzong-Yi Lee, Chia-Ru Chung, 2020, International journal of molecular sciences.

Large-scale mass spectrometry data combined with demographics analysis rapidly predicts methicillin resistance in Staphylococcus aureus.

Jorng-Tzong Horng, Hsin-Yao Wang, Jang-Jih Lu, 2020, Briefings in bioinformatics.

Rapidly predicting vancomycin resistance of Enterococcus faecium through MALDI-TOF MS spectrum obtained in real-world clinical microbiology laboratory

Min-Hsien Wu, Jorng-Tzong Horng, Tzu-Hao Chang, 2020, bioRxiv.

Increase Trichomonas vaginalis detection based on urine routine analysis through a machine learning approach

Kai-Yao Huang, H. Ning, Hsin-Yao Wang, 2019, Scientific Reports.

Rapid Detection of Heterogeneous Vancomycin-Intermediate Staphylococcus aureus Based on Matrix-Assisted Laser Desorption Ionization Time-of-Flight: Using a Machine Learning Approach and Unbiased Validation

Jorng-Tzong Horng, Tzong-Yi Lee, Chun-Hsien Chen, 2018, Front. Microbiol..

Rapid classification of group B Streptococcus serotypes based on matrix-assisted laser desorption ionization-time of flight mass spectrometry and machine learning techniques

Kai-Yao Huang, Jorng-Tzong Horng, Hsin-Yao Wang, 2019, BMC Bioinformatics.

Exploiting Two-Layer Support Vector Machine to Predict Protein SUMOylation Sites

N. Le, Van-Nui Nguyen, Thi-Xuan Tran, 2018, Advances in Engineering Research and Application.

sRIS: a small RNA illustration system for plant next-generation sequencing data analysis.

N. Lin, Song-Bin Chang, W. Chang, 2020, Plant & cell physiology.

A large-scale investigation and identification of methicillin-resistant Staphylococcus aureus based on peaks binning of matrix-assisted laser desorption ionization-time of flight MS spectra

Jorng-Tzong Horng, Bo-Yu Chu, Hsin-Yao Wang, 2020, Briefings Bioinform..

Incorporating support vector machine with sequential minimal optimization to identify anticancer peptides

Tzong-Yi Lee, Zhuo Wang, Yutong Wan, 2020, BMC Bioinform..

Machine Learning-Based Method for Obesity Risk Evaluation Using Single-Nucleotide Polymorphisms Derived from Next-Generation Sequencing

Bo-Yu Chu, Tzong-Yi Lee, Kai-Yao Huang, 2018, J. Comput. Biol..

CircNet 2.0: an updated database for exploring circular RNA regulatory networks in cancers

Hsi-Yuan Huang, Yi-Gang Chen, Xiao-Xuan Cai, 2021, Nucleic Acids Res..

dbPTM in 2022: an updated database for exploring regulatory networks and functional associations of protein post-translational modifications

Zhongyan Li, J. B. Hsu, Zhuo Wang, 2021, Nucleic Acids Res..

Incorporating Deep Learning With Word Embedding to Identify Plant Ubiquitylation Sites

Zhuo Wang, Tzong-Yi Lee, Hongfei Wang, 2020, Frontiers in Cell and Developmental Biology.

Characterization and Identification of Lysine Succinylation Sites based on Deep Learning Method

Justin Bo-Kai Hsu, Kai-Yao Huang, tzong-Yi Lee, 2019, Scientific Reports.

Identifying anti-coronavirus peptides by incorporating different negative datasets and imbalanced learning strategies

Tzong-Yi Lee, Jhih-Hua Jhong, Zhuo Wang, 2021, Briefings Bioinform..

Characterization and identification of lysine crotonylation sites based on machine learning method on both plant and mammalian

Zhuo Wang, Tzong-Yi Lee, Rulan Wang, 2020, Scientific Reports.

Incorporating hybrid models into lysine malonylation sites prediction on mammalian and plant proteins

Jorng-Tzong Horng, Li-Ching Wu, Tzong-Yi Lee, 2020, Scientific Reports.

MDRSA: A Web Based-Tool for Rapid Identification of Multidrug Resistant Staphylococcus aureus Based on Matrix-Assisted Laser Desorption Ionization-Time of Flight Mass Spectrometry

Jorng-Tzong Horng, Zhuo Wang, Hsin-Yao Wang, 2021, Frontiers in Microbiology.

dbAMP 2.0: updated resource for antimicrobial peptides with an enhanced scanning method for genomic and proteomic data

Jorng-Tzong Horng, Zhongyan Li, Tzu-Hao Chang, 2021, Nucleic Acids Res..

Characterization and identification of antimicrobial peptides with different functional activities

Jorng-Tzong Horng, Tzong-Yi Lee, Chia-Ru Chung, 2020, Briefings Bioinform..

A new scheme for strain typing of methicillin-resistant Staphylococcus aureus on the basis of matrix-assisted laser desorption ionization time-of-flight mass spectrometry by using machine learning approach

Tzong-Yi Lee, Kai-Yao Huang, Chun-Hsien Chen, 2018, PloS one.

AVPIden: a new scheme for identification and functional prediction of antiviral peptides based on machine learning approaches

Tzong-Yi Lee, Jhih-Hua Jhong, Zhuo Wang, 2021, Briefings Bioinform..

Clinically Applicable System for Rapidly Predicting Enterococcus faecium Susceptibility to Vancomycin

Min-Hsien Wu, Jorng-Tzong Horng, Tzu-Hao Chang, 2021, Microbiology spectrum.

Data-Driven Two-Stage Framework for Identification and Characterization of Different Antibiotic-Resistant Escherichia coli Isolates Based on Mass Spectrometry Data

Jorng-Tzong Horng, Hsin-Yao Wang, Li-Ching Wu, 2023, Microbiology spectrum.

Incorporating Statistical Test and Machine Intelligence Into Strain Typing of Staphylococcus haemolyticus Based on Matrix-Assisted Laser Desorption Ionization-Time of Flight Mass Spectrometry

Jorng-Tzong Horng, Tzong-Yi Lee, Chun-Hsien Chen, 2019, Front. Microbiol..

Clinically applicable rapid susceptibility testing of multi-drug resistant Staphylococcus aureus by mass spectrometry and extreme gradient boosting machine

Jorng-Tzong Horng, Hsin-Yao Wang, Jang-Jih Lu, 2021, bioRxiv.

Rapid Antibiotic Resistance Serial Prediction in Staphylococcus aureus Based on Large-Scale MALDI-TOF Data by Applying XGBoost in Multi-Label Learning

Jorng-Tzong Horng, Hsin-Yao Wang, Jang-Jih Lu, 2022, Frontiers in Microbiology.

Integrating transformer and imbalanced multi-label learning to identify antimicrobial peptides and their functional activities

Tzong-Yi Lee, Zhuo Wang, Lantian Yao, 2022, Bioinform..

Large-Scale Samples Based Rapid Detection of Ciprofloxacin Resistance in Klebsiella pneumoniae Using Machine Learning Methods

Jorng-Tzong Horng, Hsin-Yao Wang, Jang-Jih Lu, 2022, Frontiers in Microbiology.

Towards Accurate Identification of Antibiotic-Resistant Pathogens through the Ensemble of Multiple Preprocessing Methods Based on MALDI-TOF Spectra

Jorng-Tzong Horng, Hsin-Yao Wang, Li-Ching Wu, 2023, International journal of molecular sciences.

Residue–Residue Contact Can Be a Potential Feature for the Prediction of Lysine Crotonylation Sites

Zhongyan Li, Tzong-Yi Lee, Zhuo Wang, 2022, Frontiers in Genetics.

Multi-label classification and features investigation of antimicrobial peptides with various functional classes

Jorng-Tzong Horng, Li-Ching Wu, Tzong-Yi Lee, 2023, iScience.

An ensemble deep learning model for predicting minimum inhibitory concentrations of antimicrobial peptides against pathogenic bacteria

Jorng-Tzong Horng, J. B. Hsu, Li-Ching Wu, 2024, iScience.