Andrew J. Millar

发表

PlaSMo: Making existing plant and crop mathematical models available to plant systems biologists

Robert Muetzelfeldt, Christopher L. Davey, Helen J. Ougham, 2009 .

Modelling the widespread effects of TOC1 signalling on the plant circadian clock and its outputs

Andrew J. Millar, Alexandra V. Pokhilko, Paloma Mas, 2013, BMC Systems Biology.

Robustness from flexibility in the fungal circadian clock

Andrew J. Millar, Ozgur E. Akman, David A. Rand, 2010, BMC Systems Biology.

The Biodare Data Repository

Andrew J. Millar, Tomasz Zielinski, Anne Moore, 2011 .

Linking models in the PlaSMo portal and modelling the biological clock

Robert Muetzelfeldt, Christopher L. Davey, Andrew J. Millar, 2011 .

A Bayesian approach for structure learning in oscillating regulatory networks

Guido Sanguinetti, Andrew J. Millar, Daniel Trejo-Baños, 2015, Bioinform..

Plant Systems Modelling portal, PlaSMo

Robert Muetzelfeldt, Helen J. Ougham, Andrew J. Millar, 2010 .

From blank page to electronic labbook: turning the University wiki into an Electronic Lab Notebook

Andrew J. Millar, Eilidh Troup, Tomasz Zielinski, 2017 .

Balancing shared infrastructure and domain-specific tools in data management

Andrew J. Millar, Tomasz Zielinski, Eilidh Troup, 2017 .

BioDare2, online data analysis resource

Andrew J. Millar, Tomasz Zielinski, 2017 .

Biological clocks in theory and experiments

Andrew J. Millar, A. Millar, 2005, BMC Bioinformatics.

Crops In Silico: Generating Virtual Crops Using an Integrative and Multi-scale Modeling Platform

Daniel S. Katz, Matthew J. Turk, John C. Hart, 2017, Front. Plant Sci..

Corrigendum for the paper ‘Digital clocks: simple Boolean models can quantitatively describe circadian systems’

Andrew J. Millar, Ozgur E. Akman, Peter Ghazal, 2012, Journal of The Royal Society Interface.

Chromar, a Rule-based Language of Parameterised Objects

Andrew J. Millar, Gordon D. Plotkin, Ricardo Honorato-Zimmer, 2018, SASB.

Reconstruction of transcriptional dynamics from gene reporter data using differential equations

Andrew J. Millar, Sanyi Tang, David A. Rand, 2008, Bioinform..

Hybrid regulatory models: a statistically tractable approach to model regulatory network dynamics

Guido Sanguinetti, Andrew J. Millar, Andrea Ocone, 2013, Bioinform..

SBSI: an extensible distributed software infrastructure for parameter estimation in systems biology

Allan Clark, Stephen Gilmore, Andrew J. Millar, 2013, Bioinform..

Making crop and plant mathematical models easily accessible to the plant science and systems biology communities

Robert Muetzelfeldt, Christopher L. Davey, Andrew J. Millar, 2009 .

describe circadian systems Digital clocks: simple Boolean models can quantitatively

Andrew J. Millar, Ozgur E. Akman, Peter Ghazal, 2013 .

Chromar, a language of parameterised agents

Andrew J. Millar, Gordon D. Plotkin, Ricardo Honorato-Zimmer, 2019, Theor. Comput. Sci..

Modelling non-stationary gene regulatory processes with a non-homogeneous Bayesian network and the allocation sampler

Marco Grzegorczyk, Dirk Husmeier, Andrew J. Millar, 2008, Bioinform..

Timeseries used in Zielinski et al. Strengths and Limitations of Period Estimation Methods

Andrew J. Millar, Tomasz Zielinski, 2019 .

Microarray data can predict diurnal changes of starch content in the picoalga Ostreococcus

Andrew J. Millar, Oksana Sorokina, Igor Goryanin, 2011, BMC Systems Biology.

Experimental Design for Inference over the A. thaliana Circadian Clock Network

Andrew J. Millar, Daniel Trejo-Baños, Guido Sanguinetti, 2015, CMSB.

Using Higher-Order Dynamic Bayesian Networks to Model Periodic Data from the Circadian Clock of Arabidopsis Thaliana

Andrew J. Millar, Rónán Daly, Mark A. Girolami, 2009, PRIB.

Practical evaluation of SEEK and OpenBIS for biological data management in SynthSys; first report

Andrew J. Millar, Tomasz Zielinski, Eilidh Troup, 2015 .

An International Bioinformatics Infrastructure to Underpin the Arabidopsis Community

Christopher J. Rawlings, Paul N. Schofield, Andrew J. Millar, 2010, Plant Cell.

Circadian rhythms persist without transcription in a eukaryote

Andrew J. Millar, Carl Troein, Laura E. Dixon, 2010, Nature.

Multiscale digital Arabidopsis predicts individual organ and whole-organism growth (vol 111, pg E4127, 2014)

Robert Muetzelfeldt, Christopher L. Davey, Helen J. Ougham, 2015 .

The ELF3 zeitnehmer regulates light signalling to the circadian clock

Anthony Hall, Andrew J. Millar, A. Hall, 2000, Nature.

Biological rhythms and photoperiodism in plants

Andrew J. Millar, Peter John Lumsden, A. Millar, 1998 .

ELF4 Is Required for Oscillatory Properties of the Circadian Clock1[W]

Anthony Hall, Andrew J. Millar, Seth J. Davis, 2007, Plant Physiology.

Multi-scale modelling to synergise Plant Systems Biology and Crop Science

Andrew J. Millar, Daniel D. Seaton, Yin Hoon Chew, 2017 .

The Contributions of Interlocking Loops and Extensive Nonlinearity to the Properties of Circadian Clock Models

Andrew J. Millar, Treenut Saithong, Kevin J. Painter, 2010, PloS one.

The ELF4 gene controls circadian rhythms and flowering time in Arabidopsis thaliana

Andrew J. Millar, Seth J. Davis, Ferenc Nagy, 2002, Nature.

Development of a novel biosensor for the detection of arsenic in drinking water

Andrew J. Millar, Alistair Elfick, Yizhi Cai, 2007 .

Detection and resolution of genetic loci affecting circadian period in Brassica oleracea

Andrew J. Millar, Graham J. King, N. Salathia, 2007, Theoretical and Applied Genetics.

Ubiquitin ligase switch in plant photomorphogenesis: A hypothesis

Andrew J. Millar, Don R. Maszle, Alexandra Pokhilko, 2011, Journal of theoretical biology.

Strengths and Limitations of Period Estimation Methods for Circadian Data

Andrew J. Millar, Tomasz Zielinski, Eilidh Troup, 2014, PloS one.

FKF1 Conveys Timing Information for CONSTANS Stabilization in Photoperiodic Flowering

Andrew J. Millar, Young Hun Song, T. Imaizumi, 2012, Science.

Consistent Robustness Analysis (CRA) Identifies Biologically Relevant Properties of Regulatory Network Models

Andrew J. Millar, Treenut Saithong, Kevin J. Painter, 2010, PloS one.

Prediction of Photoperiodic Regulators from Quantitative Gene Circuit Models

Andrew J. Millar, David A. Rand, Paul E. Brown, 2009, Cell.

Peroxiredoxins are conserved markers of circadian rhythms

Andrew J. Millar, Min Pan, Nitin S. Baliga, 2012, Nature.

Guidelines for Genome-Scale Analysis of Biological Rhythms

Pierre Baldi, Andrew J. Millar, Francis J. Doyle, 2017, Journal of biological rhythms.

Weather and Seasons Together Demand Complex Biological Clocks

Andrew J. Millar, Carl Troein, James C. W. Locke, 2009, Current Biology.

The TIME FOR COFFEE Gene Maintains the Amplitude and Timing of Arabidopsis Circadian Clocks Online version contains Web-only data. Article, publication date, and citation information can be found at www.plantcell.org/cgi/doi/10.1105/tpc.013730.

Anthony Hall, Andrew J. Millar, Seth J. Davis, 2003, The Plant Cell Online.

Natural Allelic Variation in the Temperature-Compensation Mechanisms of the Arabidopsis thaliana Circadian Clock Sequence data from this article have been deposited with the EMBL/GenBank Data Libraries under accession nos. AY685131 and AY685132.

Andrew J. Millar, Ferenc Nagy, F. Nagy, 2005, Genetics.

The Molecular Basis of Temperature Compensation in the Arabidopsis Circadian Clock[W]

Anthony Hall, Andrew J. Millar, Seth J. Davis, 2006, The Plant Cell Online.