Ari Jumpponen

发表

Five simple guidelines for establishing basic authenticity and reliability of newly generated fungal ITS sequences.

R. Henrik Nilsson, Erik Kristiansson, Nils Hallenberg, 2012 .

Metaphenomic Responses of a Native Prairie Soil Microbiome to Moisture Perturbations

Young-Mo Kim, Lee Ann McCue, Lisa M. Bramer, 2019, mSystems.

DNA metabarcoding—Need for robust experimental designs to draw sound ecological conclusions

Noah Fierer, Frédéric Boyer, Pierre Taberlet, 2019, Molecular ecology.

Preserving accuracy in GenBank

Nils Hallenberg, Ning Zhang, Scott E. Baker, 2008 .

Improved software detection and extraction of ITS1 and ITS2 from ribosomal ITS sequences of fungi and other eukaryotes for analysis of environmental sequencing data

R. Henrik Nilsson, Erik Kristiansson, Zheng Wang, 2013 .

An open source software package for automated extraction of ITS1 and ITS2 from fungal ITS sequences for use in high-throughput community assays and molecular ecology

R. Henrik Nilsson, Erik Kristiansson, Kessy Abarenkov, 2010 .

Massively parallel 454‐sequencing of fungal communities in Quercus spp. ectomycorrhizas indicates seasonal dynamics in urban and rural sites

A. Jumpponen, Kenneth L Jones, Ari Jumpponen, 2010, Molecular ecology.

FOAM (Functional Ontology Assignments for Metagenomes): a Hidden Markov Model (HMM) database with environmental focus

Susannah G. Tringe, Konstantinos Mavromatis, Janet K. Jansson, 2014, Nucleic acids research.

Improving ITS sequence data for identification of plant pathogenic fungi

R. Henrik Nilsson, Daniel Lindner, Kevin D. Hyde, 2014, Fungal Diversity.