Alexander L. Jaffe

发表

Bipartite graph analyses reveal interdomain LGT involving ultrasmall prokaryotes and their divergent, membrane-related proteins.

Eduardo Corel, Eric Bapteste, Philippe Lopez, 2016, Environmental microbiology.

Clades of huge phages from across Earth’s ecosystems

Christine L. Sun, Alex D. Thomas, Alexander J. Probst, 2020, Nature.

Clades of huge phages from across Earth’s ecosystems

Christine L. Sun, Alex D. Thomas, Alexander J. Probst, 2019, bioRxiv.

Saccharibacteria harness light energy using type-1 rhodopsins that may rely on retinal sourced from microbial hosts.

J. Banfield, O. Béjà, H. Kandori, 2022, The ISME journal.

Early acquisition of conserved, lineage-specific proteins currently lacking functional predictions were central to the rise and diversification of archaea

Cindy J. Castelle, J. Banfield, R. Méheust, 2020, bioRxiv.

Soil Candidate Phyla Radiation Bacteria Encode Components of Aerobic Metabolism and Co-occur with Nanoarchaea in the Rare Biosphere of Rhizosphere Grassland Communities

J. Banfield, M. Firestone, M. Taga, 2021, mSystems.

Conserved and lineage-specific hypothetical proteins may have played a central role in the rise and diversification of major archaeal groups

Cindy J. Castelle, J. Banfield, R. Méheust, 2022, BMC Biology.

Variable impact of geochemical gradients on the functional potential of bacteria, archaea, and phages from the permanently stratified Lac Pavin

Cindy J. Castelle, J. Banfield, F. Perrière, 2022, bioRxiv.

Widespread stop-codon recoding in bacteriophages may regulate translation of lytic genes

Adair L. Borges, Petar I. Penev, J. Banfield, 2022, Nature Microbiology.

Ancient origin and constrained evolution of the division and cell wall gene cluster in Bacteria

J. Banfield, S. Gribaldo, Najwa Taib, 2022, Nature Microbiology.

Host translation machinery is not a barrier to phages that infect both CPR and non-CPR bacteria

J. Banfield, B. Bor, Alexander L. Jaffe, 2022, bioRxiv.

Unexpected diversity of CPR bacteria and nanoarchaea in the rare biosphere of rhizosphere-associated grassland soil

J. Banfield, M. Firestone, M. Taga, 2020, bioRxiv.

Autotrophic biofilms sustained by deeply-sourced groundwater host diverse CPR bacteria implicated in sulfur and hydrogen metabolism

Alexander J. Probst, J. Banfield, B. Baker, 2022, bioRxiv.

The evolution of island gigantism and body size variation in tortoises and turtles

M. Alfaro, G. Slater, Alexander L. Jaffe, 2011, Biology Letters.

Geographical variation in morphology and its environmental correlates in a widespread North American lizard, Anolis carolinensis (Squamata: Dactyloidae)

J. Losos, Alexander L. Jaffe, S. Campbell-Staton, 2016 .

Priority effects in microbiome assembly

M. Power, B. Koskella, A. Crits-Christoph, 2021, Nature Reviews Microbiology.

tortoises and turtles The evolution of island gigantism and body size variation in

M. Alfaro, G. Slater, Alexander L. Jaffe, 2011 .

Stop codon recoding is widespread in diverse phage lineages and has the potential to regulate translation of late stage and lytic genes

Adair L. Borges, J. Banfield, B. Al-Shayeb, 2021, bioRxiv.

Phage-encoded ribosomal protein S21 expression is linked to late-stage phage replication

Adair L. Borges, Petar I. Penev, J. Banfield, 2021, ISME Communications.

Habitat Transition in the Evolution of Bacteria and Archaea.

Cindy J. Castelle, J. Banfield, Alexander L. Jaffe, 2023, Annual review of microbiology.

Protein Family Content Uncovers Lineage Relationships and Bacterial Pathway Maintenance Mechanisms in DPANN Archaea

Cindy J. Castelle, J. Banfield, B. Baker, 2021, bioRxiv.

Lateral Gene Transfer Shapes the Distribution of RuBisCO among Candidate Phyla Radiation Bacteria and DPANN Archaea

Cindy J. Castelle, J. Banfield, C. Dupont, 2018, bioRxiv.

Priority effects in microbiome assembly

M. Power, B. Koskella, A. Crits-Christoph, 2021, Nature Reviews Microbiology.

Patterns of Gene Content and Co-occurrence Constrain the Evolutionary Path toward Animal Association in Candidate Phyla Radiation Bacteria

Alex D. Thomas, J. Banfield, R. Sachdeva, 2021, mBio.

The rise of diversity in metabolic platforms across the Candidate Phyla Radiation

Cindy J. Castelle, J. Banfield, S. Gribaldo, 2019, bioRxiv.

Saccharibacteria harness light energy using type-1 rhodopsins that may rely on retinal sourced from microbial hosts

J. Banfield, O. Béjà, H. Kandori, 2022, The ISME Journal.

Long-Term Incubation of Lake Water Enables Genomic Sampling of Consortia Involving Planctomycetes and Candidate Phyla Radiation Bacteria

J. Banfield, Lin-Xing Chen, T. Sime-Ngando, 2021, bioRxiv.

Author Correction: Priority effects in microbiome assembly

M. Power, B. Koskella, A. Crits-Christoph, 2021, Nature Reviews Microbiology.

Patterns of gene content and co-occurrence constrain the evolutionary path toward animal association in CPR bacteria

J. Banfield, R. Sachdeva, P. T. West, 2021, bioRxiv.

Left-right dewlap asymmetry and phylogeography of Anolis lineatus on Aruba and Curaçao

Alexis S. Harrison, J. Losos, T. Gamble, 2013 .

Host translation machinery is not a barrier to phages that interact with both CPR and non-CPR bacteria

J. Banfield, B. Bor, Alexander L. Jaffe, 2023, mBio.

/ 1 Patterns of gene content and co-occurrence constrain the evolutionary path 2 toward animal association in CPR bacteria

R. Sachdeva, P. T. West, Keith Bouma‐Gregson, 2022 .