Vanessa V. Phelan

发表

Primer on Agar-Based Microbial Imaging Mass Spectrometry

Pieter C. Dorrestein, Susan S. Golden, Jeramie D. Watrous, 2012, Journal of bacteriology.

Optimizing sequencing protocols for leaderboard metagenomics by combining long and short reads

Douglas J. Conrad, Pavel A. Pevzner, Rob Knight, 2019, Genome Biology.

Sharing and community curation of mass spectrometry data with Global Natural Products Social Molecular Networking

Kristian Fog Nielsen, Paul Shinn, Dac-Trung Nguyen, 2016, Nature Biotechnology.

Optimizing sequencing protocols for leaderboard metagenomics by combining long and short reads

John T. Chang, Marcus W. Fedarko, P. Pevzner, 2019, Genome Biology.

Feature-Based Molecular Networking in the GNPS Analysis Environment

Simon Rogers, Nuno Bandeira, Mingxun Wang, 2019, Nature Methods.

Pyochelin biotransformation by Staphylococcus aureus shapes bacterial competition with Pseudomonas aeruginosa in polymicrobial infections

C. Melander, A. Horswill, C. Jenul, 2023, bioRxiv.

Impact of Artificial Sputum Medium Formulation on Pseudomonas aeruginosa Secondary Metabolite Production

V. Phelan, Vanessa V. Phelan, Rachel L. Neve, 2021, Journal of bacteriology.

MS/MS networking guided analysis of molecule and gene cluster families

Nuno Bandeira, Jeramie D Watrous, Harish Nagarajan, 2013, Proceedings of the National Academy of Sciences.

GNPS Dashboard: collaborative exploration of mass spectrometry data in the web browser

Allegra T. Aron, Scott A. Jarmusch, P. Dorrestein, 2021, Nature Methods.

A Universal Language for Finding Mass Spectrometry Data Patterns

Paul D. Boudreau, Allegra T. Aron, Scott A. Jarmusch, 2022, bioRxiv.

Natural products as mediators of disease.

A. M. Caraballo-Rodríguez, P. Dorrestein, A. Melnik, 2017, Natural product reports.

Microbiome and metabolome data integration provides insight into health and disease.

Nichole Reisdorph, Michael Shaffer, C. Lozupone, 2017, Translational research : the journal of laboratory and clinical medicine.

Exogenous Alginate Protects Staphylococcus aureus from Killing by Pseudomonas aeruginosa

G. O’Toole, Dustin G. Brown, Courtney E. Price, 2019, bioRxiv.

Interkingdom metabolic transformations captured by microbial imaging mass spectrometry

Nuno Bandeira, Pieter C Dorrestein, Brendan M Duggan, 2012, Proceedings of the National Academy of Sciences.

Microbial, host and xenobiotic diversity in the cystic fibrosis sputum metabolome

Barbara A. Bailey, P. Dorrestein, F. Rohwer, 2015, The ISME Journal.

Lipophilic Mediated Assays for β-Hematin Inhibitors

D. Wright, B. Bachmann, M. D. Carter, 2010 .

Artificial Sputum Medium Formulation Impacts Pseudomonas aeruginosa Phenotype and Chemotype

V. Phelan, Vanessa V. Phelan, Rachel L. Neve, 2021, bioRxiv.

Bacillus cereus Phosphopentomutase Is an Alkaline Phosphatase Family Member That Exhibits an Altered Entry Point into the Catalytic Cycle*

W. McDonald, T. Iverson, B. Wadzinski, 2010, The Journal of Biological Chemistry.

Feature-Based Molecular Networking for Metabolite Annotation.

Vanessa V Phelan, V. Phelan, Vanessa V. Phelan, 2020, Methods in molecular biology.

Adenylation enzyme characterization using gamma -(18)O(4)-ATP pyrophosphate exchange.

J. McLean, B. Bachmann, V. Phelan, 2009, Chemistry & biology.

Adenylation enzyme characterization using γ-18O4-ATP pyrophosphate exchange

B. Bachmann, V. Phelan, Vanessa V. Phelan, 2009 .

Microbial metabolic exchange in 3D

P. Dorrestein, B. Duggan, T. Alexandrov, 2013, The ISME Journal.

Spray-Based Application of Matrix to Agar-Based Microbial Samples for Reproducible Sample Adherence in MALDI MSI.

V. Phelan, Vanessa V. Phelan, Justin N Jens, 2022, Journal of the American Society for Mass Spectrometry.

Mass Spectrometry Analysis of Pseudomonas aeruginosa Treated with Azithromycin

P. Dorrestein, V. Phelan, Vanessa V. Phelan, 2015, Journal of The American Society for Mass Spectrometry.

Microbial metabolic exchange--the chemotype-to-phenotype link.

Pieter C Dorrestein, Kit Pogliano, P. Dorrestein, 2011, Nature chemical biology.

Impact of a Transposon Insertion in phzF2 on the Specialized Metabolite Production and Interkingdom Interactions of Pseudomonas aeruginosa

P. Dorrestein, D. Cornett, K. Pogliano, 2014, Journal of bacteriology.

Pseudomonas aeruginosa and Interkingdom Interactions of on the Specialized Metabolite Production phzF 2 Impact of a Transposon Insertion in

P. Dorrestein, D. Cornett, K. Pogliano, 2014 .

The Impact of a Transposon Insertion in phzF2 on the Specialized Metabolite

D. Cornett, K. Pogliano, S. Noble, 2014 .

MBRA-2: a Modified Chemostat System to Culture Biofilms

V. Phelan, Vanessa V. Phelan, Rachel L. Neve, 2022, Microbiology spectrum.

Sharing and community curation of mass spectrometry data with GNPS

Erin E. Carlson, Roger G. Linington, Katherine R. Duncan, 2016 .

Reassembly of Anthramycin Biosynthetic Gene Cluster by Using Recombinogenic Cassettes

C. Farnet, B. Bachmann, Yunfeng Hu, 2008, Chembiochem : a European journal of chemical biology.

GNPS Dashboard: Collaborative Analysis of Mass Spectrometry Data in the Web Browser

Allegra T. Aron, Scott A. Jarmusch, P. Dorrestein, 2021, bioRxiv.

Benzodiazepine biosynthesis in Streptomyces refuineus.

Ioanna Ntai, C. Farnet, B. Bachmann, 2007, Chemistry & biology.

Microbial, host and xenobiotic diversity in the cystic fibrosis sputum metabolome

Barbara A. Bailey, P. Dorrestein, F. Rohwer, 2015, The ISME Journal.

Model Systems to Study the Chronic, Polymicrobial Infections in Cystic Fibrosis: Current Approaches and Exploring Future Directions

M. A. Henson, A. Prince, R. Kümmerli, 2021, mBio.

Bacillus cereus Phosphopentomutase Is an Alkaline Phosphatase Family Member That Exhibits an Altered Entry Point into the Catalytic Cycle*

B. Wadzinski, B. Bachmann, T. Panosian, 2010, The Journal of Biological Chemistry.