Michael D Stone

发表

Structural Basis of Template Boundary Definition in Tetrahymena Telomerase

Alexandra N. Ooms, Cheng Lu, B. Akiyama, 2015, Nature Structural &Molecular Biology.

Chirality sensing by Escherichia coli topoisomerase IV and the mechanism of type II topoisomerases

Michael D. Stone, Carlos Bustamante, Alexander Vologodskii, 2003, Proceedings of the National Academy of Sciences of the United States of America.

Integrated magnetic tweezers and single-molecule FRET for investigating the mechanical properties of nucleic acid.

J. Parks, Xi Long, Michael D Stone, 2016, Methods.

Mechanical unfolding of human telomere G-quadruplex DNA probed by integrated fluorescence and magnetic tweezers spectroscopy

Clive R. Bagshaw, Michael D. Stone, Joseph W. Parks, 2013, Nucleic acids research.

Getting a grip on the terminator.

Michael D Stone, 2012, Journal of molecular biology.

Splicing factor SRSF1 expands the regulatory logic of microRNA expression

Michael D. Stone, J. Sanford, Marija Dargyte, 2020, bioRxiv.

Single-molecule FRET-Rosetta reveals RNA structural rearrangements during human telomerase catalysis

Michael D. Stone, Rhiju Das, K. Kappel, 2017, RNA.

Structural transitions and elasticity from torque measurements on DNA

Michael D. Stone, N. Cozzarelli, C. Bustamante, 2003, Nature.

Folding heterogeneity in the essential human telomerase RNA three-way junction

Michael D. Stone, Rhiju Das, J. Hentschel, 2019, bioRxiv.

Single-Molecule Mechanical Analysis of Strand Invasion in Human Telomere DNA

Michael D. Stone, Shankar Shastry, J. Parks, 2021, bioRxiv.

Dynamics of nucleosome remodelling by individual ACF complexes

Michael D. Stone, X. Zhuang, G. Narlikar, 2009, Nature.

Cryo-EM structures tell a tale of two telomerases

Michael D. Stone, J. Hentschel, Michael D Stone, 2021, Nature Structural & Molecular Biology.

The C-terminal domain of Tetrahymena thermophila telomerase holoenzyme protein p65 induces multiple structural changes in telomerase RNA.

Michael D. Stone, B. Akiyama, Michael D Stone, 2012, RNA.

Stepwise protein-mediated RNA folding directs assembly of telomerase ribonucleoprotein

Michael D. Stone, Xiaowei Zhuang, X. Zhuang, 2007, Nature.

Single-Molecule Studies of Telomeres and Telomerase.

Michael D. Stone, J. Parks, Michael D Stone, 2017, Annual review of biophysics.

The Processivity of Telomerase: Insights from Kinetic Simulations and Analyses

Michael D. Stone, J. Hentschel, Clive R. Bagshaw, 2021, Molecules.

Multiplexed single-molecule analysis of human telomerase synthesizing DNA

Christopher P. Lapointe, Michael D. Stone, J. Puglisi, 2021, bioRxiv.

Telomere DNA G-quadruplex folding within actively extending human telomerase

Michael D. Stone, J. Parks, J. Hentschel, 2018, Proceedings of the National Academy of Sciences.

New perspectives on telomerase RNA structure and function

Michael D. Stone, Michael D Stone, Linnea I. Jansson, 2018, Wiley interdisciplinary reviews. RNA.

Dynamics of Human Telomerase

Rhiju Das, J. Parks, Michael D Stone, 2018 .

Coordinated DNA dynamics during the human telomerase catalytic cycle

Michael D. Stone, J. Parks, Michael D Stone, 2014, Nature Communications.

Single-Molecule Analysis of Reverse Transcriptase Enzymes.

Michael D. Stone, Michael D Stone, Linnea I. Jansson, 2019, Cold Spring Harbor perspectives in biology.

Detailed view of human telomerase enzyme invites rethink of its structure

Michael D. Stone, Michael D Stone, 2018, Nature.

The telomerase essential N-terminal domain promotes DNA synthesis by stabilizing short RNA–DNA hybrids

Michael D. Stone, B. Akiyama, J. Parks, 2015, Nucleic acids research.

A Conserved Motif in Tetrahymena thermophila Telomerase Reverse Transcriptase Is Proximal to the RNA Template and Is Essential for Boundary Definition*

B. Akiyama, Michael D Stone, Anastassia Gomez, 2013, The Journal of Biological Chemistry.

Structural biology: A solution to the telomerase puzzle

B. Akiyama, Michael D Stone, 2013, Nature.

Single-molecule analysis of telomerase structure and function.

B. Akiyama, Michael D Stone, M. Hengesbach, 2011, Current opinion in chemical biology.

A single-molecule assay for telomerase structure-function analysis

Michael D. Stone, Xiaowei Zhuang, X. Zhuang, 2009, Nucleic acids research.

Single-molecule FRET reveals the folding dynamics of the human telomerase RNA pseudoknot domain.

Michael D. Stone, J. Feigon, Nak-Kyoon Kim, 2012, Angewandte Chemie.

Multiple modes of Escherichia coli DNA gyrase activity revealed by force and torque

Michael D. Stone, N. Cozzarelli, C. Bustamante, 2007, Nature Structural &Molecular Biology.

The RNA accordion model for template positioning by telomerase RNA during telomeric DNA synthesis

Michael D. Stone, T. Cech, B. Akiyama, 2011, Nature Structural &Molecular Biology.

Mechanochemical analysis of DNA gyrase using rotor bead tracking

Michael D. Stone, N. Cozzarelli, C. Bustamante, 2006, Nature.

Disentangling DNA during replication: a tale of two strands.

Michael D. Stone, C. D. Hardy, N. Cozzarelli, 2004, Philosophical transactions of the Royal Society of London. Series B, Biological sciences.

Kinetic Partitioning Modulates Human Telomere DNA G-Quadruplex Structural Polymorphism

Michael D. Stone, Michael D Stone, Xi Long, 2013, PloS one.

Reevaluation of the RNA binding properties of the Tetrahymena thermophila telomerase reverse transcriptase N-terminal domain

Michael D. Stone, K. Collins, Michael D Stone, 2019, bioRxiv.

Direct observation of nucleic acid binding dynamics by the telomerase essential N-terminal domain

Michael D. Stone, Shankar Shastry, N. Lue, 2018, Nucleic acids research.