M. Suleman

发表

Antioxidants, its role in preventing free radicals and infectious diseases in human body

M. Suleman, 2018, Pure and Applied Biology.

Investigation of the binding and dynamic features of A.30 variant revealed higher binding of RBD for hACE2 and escapes the neutralizing antibody: A molecular simulation approach

Dongqing Wei, A. Mohammad, Qudsia Yousafi, 2022, Computers in Biology and Medicine.

Effect of temperature and humidity on coronavirus infection in Pakistan

Syed Shujait Ali, W. Ahmad, A. Rasool, 2021, Gene Reports.

Antigen encoded by vaccine vectors derived from human adenovirus serotype 5 is preferentially presented to CD8+ T lymphocytes by the CD8α+ dendritic cell subset.

E. Tartour, B. Klonjkowski, J. Richardson, 2011, Vaccine.

In-silico modeling and analysis of the therapeutic potential of miRNA-7 on EGFR associated signaling network involved in breast cancer

A. Javed, Samra Khalid, Rumeza Hanif, 2020 .

Syed Shujait Ali, M. Waseem, Shahid Ali, 2020, Journal of biomolecular structure & dynamics.

Firewalls Prevent Systemic Dissemination of Vectors Derived from Human Adenovirus Type 5 and Suppress Production of Transgene-Encoded Antigen in a Murine Model of Oral Vaccination

J. Ben Arous, N. Cordonnier, S. Biacchesi, 2018, Front. Cell. Infect. Microbiol..

Blocking key mutated hotspot residues in the RBD of the omicron variant (B.1.1.529) with medicinal compounds to disrupt the RBD-hACE2 complex using molecular screening and simulation approaches

Syed Shujait Ali, Dongqing Wei, A. Mohammad, 2022, RSC advances.

PIR promotes tumorigenesis of breast cancer by upregulating cell cycle activator E2F1

Qinxi Li, D. Lin, M. Suleman, 2019, Cell cycle.

Characterization of proteome wide antigenic epitopes to design proteins specific and proteome-wide ensemble vaccines against heartland virus using structural vaccinology and immune simulation approaches.

Syed Shujait Ali, Asad Ullah, M. Suleman, 2022, Microbial pathogenesis.

Adolescent transport and unintentional injuries: a systematic analysis using the Global Burden of Disease Study 2019

Salman T. Hussain, Mohammad Mainul Islam, Sathish Kumar Jayapal, 2022, The Lancet. Public health.

Screening of immune epitope in the proteome of the Dabie bandavirus, SFTS, to design a protein-specific and proteome-wide vaccine for immune response instigation using an immunoinformatics approaches

Syed Shujait Ali, Dongqing Wei, A. Mohammad, 2022, Comput. Biol. Medicine.

Roles and functions of SARS-CoV-2 proteins in host immune evasion

Suliman Khan, S. Luo, F. Rashid, 2022, Frontiers in Immunology.

Sequence-structure functional implications and molecular simulation of high deleterious nonsynonymous substitutions in IDH1 revealed the mechanism of drug resistance in glioma

Syed Shujait Ali, Y. Waheed, Dongqing Wei, 2022, Frontiers in Pharmacology.

Histologic Changes Associated With Placental Separation in Gilts Infected with Porcine Reproductive and Respiratory Syndrome Virus

S. Detmer, D. MacPhee, J. Harding, 2018, Veterinary pathology.

Calpastatin (CAST) gene polymorphism in Kajli, Lohi and Thalli sheep breeds

A. Ghafoor, M. Yousaf, M. Suleman, 2012 .

Mycoplasma bovis induced inhibition of bovine PBMC proliferation is ameliorated after 1 blocking the immune-inhibitory programmed death-1 (PD-1) receptor

S. Jimbo, Teresia Maina, M. Suleman, 2018 .

Humoral and Cell-Mediated Immune Response Validation in Calves after a Live Attenuated Vaccine of Babesia bigemina

M. Rashid, A. Durrani, M. Suleman, 2020, Pathogens.

Molecular Analysis of Callipyge Gene Mutation (C.267A>G) in Kajli, Lohi and Thalli Sheep Breeds of Pakistan

A. Ghafoor, A. Aziz, M. Yousaf, 2018, Russian Journal of Genetics.

Κ‐CN gene polymorphism in Nili‐ravi buffalo, Achai and Sahiwal cattle of Pakistan

A. Ghafoor, M. Yousaf, N. Abbas, 2015 .

Immunoinformatic-based design of immune-boosting multiepitope subunit vaccines against monkeypox virus and validation through molecular dynamics and immune simulation

S. Luo, Liji Xie, F. Rashid, 2022, Frontiers in Immunology.

Global mortality associated with 33 bacterial pathogens in 2019: a systematic analysis for the Global Burden of Disease Study 2019

Sathish Kumar Jayapal, Haleh Mousavi Isfahani, Syed Shujait Ali, 2022, The Lancet.

Repositioning of experimentally validated anti-breast cancer peptides to target FAK-PAX complex to halt the breast cancer progression: a biomolecular simulation approach

Dongqing Wei, Yanjing Wang, S. Shan, 2022, Molecular Diversity.

Effect of lead acetate administered orally at different dosage levels in broiler chicks

A. Khan, F. Rashid, Z. Hussain, 2011 .

Development of multiplex PCR for rapid and simultaneous detection of E. coli (APEC), Salmonella, Mycoplasma gallisepticum and Mycoplasma Synoviae

N. Siddique, Abbas Khan, A. Aziz, 2021 .

Subtractive proteomics assisted therapeutic targets mining and designing ensemble vaccine against Candida auris for immune response induction

Syed Shujait Ali, Dongqing Wei, Yanjing Wang, 2022, Computers in Biology and Medicine.

Evaluation of the Whole Proteome of Achromobacter xylosoxidans to Identify Vaccine Targets for mRNA and Peptides-Based Vaccine Designing Against the Emerging Respiratory and Lung Cancer-Causing Bacteria

Y. Waheed, Dongqing Wei, F. Almajhdi, 2022, Frontiers in Medicine.

The porcine trophoblast cell line PTr2 is susceptible to porcine reproductive and respiratory syndrome virus-2 infection.

S. Detmer, D. MacPhee, M. Suleman, 2019, Placenta.

Mucosal Imprinting of Vaccine-Induced CD8+ T Cells Is Crucial to Inhibit the Growth of Mucosal Tumors

M. Bureau, L. Zitvogel, E. Tartour, 2013, Science Translational Medicine.

Genome-wide screening of vaccine targets prioritization and reverse vaccinology aided design of peptides vaccine to enforce humoral immune response against Campylobacter jejuni

Syed Shujait Ali, Dongqing Wei, Muhammad Suleman, 2021, Comput. Biol. Medicine.

Proteome wide vaccine targets prioritization and designing of antigenic vaccine candidate to trigger the host immune response against the Mycoplasma genitalium infection.

Syed Shujait Ali, Dongqing Wei, Sajjad Ahmad, 2021, Microbial pathogenesis.

Proteome-wide mapping and reverse vaccinology-based B and T cell multi-epitope subunit vaccine designing for immune response reinforcement against Porphyromonas gingivalis

Syed Shujait Ali, Dongqing Wei, A. Rehman, 2020, Journal of biomolecular structure & dynamics.

Spatiotemporal immunofluorescent evaluation of porcine reproductive and respiratory syndrome virus transmission across the maternal-fetal interface.

S. Detmer, D. MacPhee, J. Harding, 2018, Pathogens and disease.

IDH1 Arg-132 mutant promotes tumor formation through down-regulating p53

Qinxi Li, M. Suleman, Huamin Zhou, 2018, The Journal of Biological Chemistry.

Computational modelling of potentially emerging SARS-CoV-2 spike protein RBDs mutations with higher binding affinity towards ACE2: A structural modelling study

Syed Shujait Ali, Dongqing Wei, A. Azad, 2021, Computers in Biology and Medicine.

c-Src Promotes Tumorigenesis and Tumor Progression by Activating PFKFB3.

Qinxi Li, M. Cheng, Hsiang-Yu Tang, 2020, Cell reports.

IDH1 Mutation Promotes Tumorigenesis by Inhibiting JNK Activation and Apoptosis Induced by Serum Starvation.

Lianzhong Luo, Qinxi Li, L. Hung, 2017, Cell reports.

Classification of fetal resilience to porcine reproductive and respiratory syndrome (PRRS) based on temporal viral load in late gestation maternal tissues and fetuses.

S. Detmer, D. MacPhee, J. Harding, 2019, Virus research.

Prolactin gene polymorphism in Nili‐Ravi buffaloes in relation to Sahiwal and Achai Cattle

A. Ghafoor, M. Yousaf, M. Suleman, 2013 .

Molecular Analysis of Leptin Gene Polymorphism in Achai, Sahiwal Cattle and Nili-ravi Buffalo Breeds of Pakistan

A. Ghafoor, A. Aziz, Shahid Ali, 2019 .

STUDY OF SERUM URIC ACID LEVELS IN PREGNANCY INDUCED HYPERTENSION

M. Suleman, Laxmi Narayana, B. Vodelu, 2014 .

Development of multi-epitope subunit vaccine for protection against the norovirus’ infections based on computational vaccinology

Syed Shujait Ali, Dongqing Wei, Mazhar I. Khan, 2020, Journal of biomolecular structure & dynamics.

SARS-CoV-2 new variants: Characteristic features and impact on the efficacy of different vaccines

Syed Shujait Ali, Dongqing Wei, A. Mohammad, 2021, Biomedicine & Pharmacotherapy.

Immunogenomics guided design of immunomodulatory multi-epitope subunit vaccine against the SARS-CoV-2 new variants, and its validation through in silico cloning and immune simulation

Syed Shujait Ali, Dongqing Wei, A. Mohammad, 2021, Computers in Biology and Medicine.

Molecular Analysis of Callipyge Gene Mutation (C.267A>G) in Kajli, Lohi and Thalli Sheep Breeds of Pakistan

A. Ghafoor, A. Aziz, M. Yousaf, 2018, Russian Journal of Genetics.

Computational Modeling of Immune Response Triggering Immunogenic Peptide Vaccine Against the Human Papillomaviruses to Induce Immunity Against Cervical Cancer.

Syed Shujait Ali, Dongqing Wei, Sajjad Ahmad, 2021, Viral immunology.

Combined drug repurposing and virtual screening strategies with molecular dynamics simulation identified potent inhibitors for SARS-CoV-2 main protease (3CLpro)

Syed Shujait Ali, Dongqing Wei, M. T. Khan, 2020, Journal of biomolecular structure & dynamics.

Analysis of the Aflatoxin M1 contamination in traditional and commercial cheeses consumed in Yemen

M. Suleman, Nasib Zaman, F. Akbar, 2021, International Journal of Dairy Technology.

c-Src phosphorylation and activation of hexokinase promotes tumorigenesis and metastasis

Fang Tian, Yanming Zhou, Qinxi Li, 2017, Nature Communications.

Higher infectivity of the SARS‐CoV‐2 new variants is associated with K417N/T, E484K, and N501Y mutants: An insight from structural data

Syed Shujait Ali, Dongqing Wei, A. Mohammad, 2021, Journal of cellular physiology.

Mutational Landscape of Pirin and Elucidation of the Impact of Most Detrimental Missense Variants That Accelerate the Breast Cancer Pathways: A Computational Modelling Study

Syed Shujait Ali, Sajjad Ahmad, K. Allemailem, 2021, Frontiers in Molecular Biosciences.

BC-TFdb: a database of transcription factor drivers in breast cancer

Muhammad Waseem, Dongqing Wei, Syed Shujait Ali, 2021, Database J. Biol. Databases Curation.

Prevalence of typhoid fever in five Southern districts of Khyber Pakhtunkhwa, Pakistan: A preliminary study

Shahid Ali, M. Younas, M. Suleman, 2014 .

The Omicron (B.1.1.529) variant of SARS-CoV-2 binds to the hACE2 receptor more strongly and escapes the antibody response: Insights from structural and simulation data

Syed Shujait Ali, Y. Waheed, Dongqing Wei, 2022, International Journal of Biological Macromolecules.

Mutations in SARS-CoV-2 ORF8 Altered the Bonding Network With Interferon Regulatory Factor 3 to Evade Host Immune System

Shuyi Chen, F. Rashid, Shixing Tang, 2021, Frontiers in Microbiology.

Structural Analysis on the Severe Acute Respiratory Syndrome Coronavirus 2 Non-structural Protein 13 Mutants Revealed Altered Bonding Network With TANK Binding Kinase 1 to Evade Host Immune System

Shuyi Chen, F. Rashid, Shixing Tang, 2021, Frontiers in Microbiology.

Mutational analysis of the spike protein of SARS-COV-2 isolates revealed atomistic features responsible for higher binding and infectivity

Syed Shujait Ali, Y. Waheed, F. Almajhdi, 2023, Frontiers in Cell and Developmental Biology.

Bioinformatics analysis of the differences in the binding profile of the wild-type and mutants of the SARS-CoV-2 spike protein variants with the ACE2 receptor

Syed Shujait Ali, Dongqing Wei, Qudsia Yousafi, 2021, Computers in Biology and Medicine.

Structural-Dynamics and Binding Analysis of RBD from SARS-CoV-2 Variants of Concern (VOCs) and GRP78 Receptor Revealed Basis for Higher Infectivity

Syed Shujait Ali, Dongqing Wei, A. Mohammad, 2021, Microorganisms.

Structural insights into the effect of mutations in the spike protein of SARS-CoV-2 on the binding with human furin protein

Syed Shujait Ali, Abbas Khan, Haji Khan, 2023, Heliyon.

Immunoinformatics and Immunogenetics-Based Design of Immunogenic Peptides Vaccine against the Emerging Tick-Borne Encephalitis Virus (TBEV) and Its Validation through In Silico Cloning and Immune Simulation

Syed Shujait Ali, Dongqing Wei, Sajjad Ahmad, 2021, Vaccines.

Towards an Ensemble Vaccine against the Pegivirus Using Computational Modelling Approaches and Its Validation through In Silico Cloning and Immune Simulation

Syed Shujait Ali, Syed Nouman Nasir, Dongqing Wei, 2021, Vaccines.

Genetic characterization of structural and open reading Fram-8 proteins of SARS-CoV-2 isolates from different countries

A. Aziz, F. Rashid, M. Suleman, 2020, Gene Reports.

Immunoinformatic based designing of potential immunogenic novel mRNA and peptide-based prophylactic vaccines against H5N1 and H7N9 avian influenza viruses

Syed Shujait Ali, Muhammad Ishtiaq Ali, Zia Ud Din, 2023, Journal of biomolecular structure & dynamics.

In Silico Mutagenesis-Based Remodelling of SARS-CoV-1 Peptide (ATLQAIAS) to Inhibit SARS-CoV-2: Structural-Dynamics and Free Energy Calculations

Syed Shujait Ali, Dongqing Wei, Abbas Khan, 2020, Interdisciplinary Sciences: Computational Life Sciences.

Development of conserved multi-epitopes based hybrid vaccine against SARS-CoV-2 variants: an immunoinformatic approach

M. Suleman, Allah Rakha Yaseen, Abdul Salam Qadri, 2023, In Silico Pharmacology.

In Silico Mutagenesis-Based Remodelling of SARS-CoV-1 Peptide (ATLQAIAS) to Inhibit SARS-CoV-2: Structural-Dynamics and Free Energy Calculations

Syed Shujait Ali, Dongqing Wei, Abbas Khan, 2021, Interdisciplinary sciences, computational life sciences.

The XBB.1.5 slightly increase the binding affinity for host receptor ACE2 and exhibit strongest immune escaping features: molecular modeling and free energy calculation

Dongqing Wei, Haji Khan, F. Rashid, 2023, Frontiers in Molecular Biosciences.

Comparative mutational analysis of the Zika virus genome from different geographical locations and its effect on the efficacy of Zika virus-specific neutralizing antibodies

Sikandar G. Khan, S. Luo, Liji Xie, 2023, Frontiers in Microbiology.

SSR based genetic diversity analysis in a diverse germplasm of groundnut (Arachis hypogaea L.) from Pakistan

A. Ghafoor, F. Rashid, I. Muhammad, 2014 .

Designing a multi-epitopes subunit vaccine against human herpes virus 6A based on molecular dynamics and immune stimulation.

S. Rehman, M. Xue, Jingbo Zhai, 2023, International journal of biological macromolecules.

Exploring the natural products chemical space to abrogate the F3L-dsRNA interface of monkeypox virus to enhance the immune responses using molecular screening and free energy calculations

M. Suleman, Norah Albekairi, Sergio Crovella, 2024, Frontiers in pharmacology.

Pharmacotherapeutic Potential of Natural Products to Target the SARS-CoV-2 PLpro Using Molecular Screening and Simulation Approaches

Abrar Mohammad Sayaf, Dongqing Wei, Qudsia Yousafi, 2023, Applied Biochemistry and Biotechnology.