Levani Zandarashvili

发表

Effective strategy to assign 1H-15N heteronuclear correlation NMR signals from lysine side-chain NH3+ groups of proteins at low temperature

J. Iwahara, Alexandre Esadze, Levani Zandarashvili, 2014, Journal of Biomolecular NMR.

Entropic Enhancement of Protein-DNA Affinity by Oxygen-to-Sulfur Substitution in DNA Phosphate.

M. White, D. Gorenstein, J. Iwahara, 2015, Biophysical journal.

Structural basis for allosteric PARP-1 retention on DNA breaks

S. Pettitt, C. Lord, B. E. Black, 2020, Science.

Molecular basis of hUHRF1 allosteric activation for synergistic histone modification binding by PI5P

B. E. Black, W. Fischle, Papita Mandal, 2021, bioRxiv.

Thermodynamic Additivity for Impacts of Base-Pair Substitutions on Association of the Egr-1 Zinc-Finger Protein with DNA.

J. Iwahara, Levani Zandarashvili, Abhijnan Chattopadhyay, 2016, Biochemistry.

Balancing between affinity and speed in target DNA search by zinc-finger proteins via modulation of dynamic conformational ensemble

Y. Levy, D. Vuzman, J. Iwahara, 2015, Proceedings of the National Academy of Sciences.

Changes in conformational dynamics of basic side chains upon protein–DNA association

Chuanyin Chen, B. Pettitt, J. Iwahara, 2016, Nucleic acids research.

Signature of mobile hydrogen bonding of lysine side chains from long-range 15N-13C scalar J-couplings and computation.

R. Brüschweiler, Da-Wei Li, J. Iwahara, 2011, Journal of the American Chemical Society.

Physicochemical Properties of Ion Pairs of Biological Macromolecules

J. Iwahara, Alexandre Esadze, Levani Zandarashvili, 2015, Biomolecules.

Stereospecific Effects of Oxygen‐to‐Sulfur Substitution in DNA Phosphate on Ion Pair Dynamics and Protein–DNA Affinity

J. Iwahara, D. Nguyen, Levani Zandarashvili, 2016, Chembiochem : a European journal of chemical biology.

Structural impact of complete CpG methylation within target DNA on specific complex formation of the inducible transcription factor Egr‐1

J. Iwahara, Alexandre Esadze, Levani Zandarashvili, 2015, FEBS letters.

Thermodynamic Additivity for Impacts of Base-Pair Substitutions on Association of the Egr-1 Zinc-Finger Protein with DNA.

J. Iwahara, Levani Zandarashvili, Abhijnan Chattopadhyay, 2016, Biochemistry.

NMR-based investigations into target DNA search processes of proteins.

J. Iwahara, Alexandre Esadze, Levani Zandarashvili, 2018, Methods.

NAD+ analog reveals PARP-1 substrate-blocking mechanism and allosteric communication from catalytic center to DNA-binding domains

B. E. Black, J. Pascal, Levani Zandarashvili, 2018, Nature Communications.

NMR studies on the dynamics of hydrogen bonds and ion pairs involving lysine side chains of proteins.

J. Iwahara, Alexandre Esadze, Levani Zandarashvili, 2013, Advances in protein chemistry and structural biology.

Temperature dependence of internal motions of protein side-chain NH3(+) groups: insight into energy barriers for transient breakage of hydrogen bonds.

J. Iwahara, Levani Zandarashvili, 2015, Biochemistry.

Real-time Kinetics of High-mobility Group Box 1 (HMGB1) Oxidation in Extracellular Fluids Studied by in Situ Protein NMR Spectroscopy*

Yong Sun Lee, K. Rajarathnam, Debashish Sahu, 2013, The Journal of Biological Chemistry.

Spectroscopy Protein NMR in Situ Fluids Studied by ExtracellularBox 1 ( HMGB 1 ) Oxidation in Real-time Kinetics of High-mobility Group Molecular Biophysics

Yong Sun Lee, K. Rajarathnam, Debashish Sahu, 2013 .

NAD+ analog reveals PARP-1 substrate-blocking mechanism and allosteric communication from catalytic center to DNA-binding domains

B. E. Black, J. Pascal, Marie-France Langelier, 2018, Nature Communications.

Residence Times of Molecular Complexes in Solution from NMR Data of Intermolecular Hydrogen-Bond Scalar Coupling.

J. Iwahara, Alexandre Esadze, D. Nguyen, 2016, The journal of physical chemistry letters.

Hydrogen-Deuterium Exchange Coupled to Top- and Middle-Down Mass Spectrometry Reveals Histone Tail Dynamics before and after Nucleosome Assembly.

B. Garcia, S. Englander, B. E. Black, 2018, Structure.

Centromeres are maintained by fastening CENP-A to DNA and directing an arginine anchor-dependent nucleosome transition

Glennis A. Logsdon, I. Cheeseman, B. E. Black, 2017, Nature Communications.

Effective strategy to assign 1H-15N heteronuclear correlation NMR signals from lysine side-chain NH3+ groups of proteins at low temperature

J. Iwahara, Alexandre Esadze, Levani Zandarashvili, 2014, Journal of biomolecular NMR.

Dynamic Equilibria of Short-Range Electrostatic Interactions at Molecular Interfaces of Protein–DNA Complexes

Chuanyin Chen, B. Pettitt, J. Iwahara, 2015, The journal of physical chemistry letters.

Asymmetrical roles of zinc fingers in dynamic DNA-scanning process by the inducible transcription factor Egr-1

Y. Levy, D. Vuzman, Debashish Sahu, 2012, Proceedings of the National Academy of Sciences.

Hydrogen-deuterium exchange coupled to top- and middle-down mass spectrometry enables high-resolution measurements of histone tail dynamics before and after nucleosome assembly

B. Garcia, S. Englander, B. E. Black, 2018, bioRxiv.

Balancing between affinity and speed in target DNA search by zinc-finger proteins via modulation of dynamic conformational ensemble

Y. Levy, D. Vuzman, J. Iwahara, 2015, Proceedings of the National Academy of Sciences.

Real-time Kinetics of High-mobility Group Box 1 (HMGB1) Oxidation in Extracellular Fluids Studied by in Situ Protein NMR Spectroscopy*

Yong Sun Lee, K. Rajarathnam, Debashish Sahu, 2013, Journal of Biological Chemistry.

Molecular basis of hUHRF1 allosteric activation for synergistic histone modification binding by PI5P

B. E. Black, W. Fischle, Papita Mandal, 2022, Science advances.

Hydrogen-Deuterium Exchange Coupled to Top- and Middle-Down Mass Spectrometry Reveals Histone Tail Dynamics before and after Nucleosome Assembly.

Zhong-Yuan Kan, Mariel Coradin, Kelly R Karch, 2018, Structure.

Signal Transmission in Escherichia coli Cyclic AMP Receptor Protein for Survival in Extreme Acidic Conditions.

J. Lee, J. Knapp, A. Gribenko, 2021, Biochemistry.

Effective strategy to assign 1H-15N heteronuclear correlation NMR signals from lysine side-chain NH3+ groups of proteins at low temperature

J. Iwahara, Alexandre Esadze, Levani Zandarashvili, 2014, Journal of Biomolecular NMR.