C. Halliday

D. Marriott, T. Sorrell, V. Sintchenko, 2017, Clinical microbiology and infection : the official publication of the European Society of Clinical Microbiology and Infectious Diseases.

Antifungal Susceptibility Testing of Candida and Cryptococcus Species and Mechanisms of Resistance: Implications for Clinical Laboratories

M. Slavin, S. Chen, C. Halliday, 2017, Current Fungal Infection Reports.

Whole Genome Sequencing Shows Genetic Diversity, as Well as Clonal Complex and Gene Polymorphisms Associated with Fluconazole Non-Susceptible Isolates of Candida tropicalis

V. Sintchenko, C. Keighley, W. Meyer, 2022, Journal of fungi.

A New Age in Molecular Diagnostics for Invasive Fungal Disease: Are We Ready?

W. Meyer, S. Kidd, S. Chen, 2020, Frontiers in Microbiology.

Pulmonary Cryptococcosis

J. Beardsley, S. Chen, C. Halliday, 2022, Journal of fungi.

Development of a Real-Time PCR Assay to Identify and Distinguish between Cryptococcus neoformans and Cryptococcus gattii Species Complexes

S. Chen, C. Halliday, Ronald López, 2022, Journal of fungi.

In vitro activity of the novel antifungal compound F901318 against Australian Scedosporium and Lomentospora fungi.

T. Sorrell, J. Rex, D. Law, 2018, Medical mycology.

Role of prospective screening of blood for invasive aspergillosis by polymerase chain reaction in febrile neutropenic recipients of haematopoietic stem cell transplants and patients with acute leukaemia

Peter Shaw, T. Sorrell, G. James, 2005, British journal of haematology.

Measuring intraspecific variation in the response of clinical isolates of Aspergillus fumigatus to oxidative stress.

C. Morton, S. Chen, C. Halliday, 2019 .

Title : Measuring intraspecific variation in the response of clinical isolates 2 of Aspergillus fumigatus to oxidative stress

C. Morton, S. Chen, C. Halliday, 2019 .

Drug-Resistant Aspergillus flavus Is Highly Prevalent in the Environment of Vietnam: A New Challenge for the Management of Aspergillosis?

J. Beardsley, T. Sorrell, J. Day, 2020, Journal of fungi.

Molecular diagnostic methods for invasive fungal disease: the horizon draws nearer?

T. Sorrell, S. Kidd, S. Chen, 2015, Pathology.

Mycological testing of clinical samples in Australasian pathology laboratories: wide diversity and room for improvement.

W. Meyer, S. Kidd, J. Robson, 2016, Pathology.

Cerebral pyogranulomatous encephalitis caused by Cladophialophora bantiana in a 15-week-old domestic shorthair kitten

M. Dennis, C. Halliday, M. Gunew, 2016, JFMS open reports.

Candidaemia and a risk predictive model for overall mortality: a prospective multicentre study

D. Marriott, T. Sorrell, C. Keighley, 2019, BMC Infectious Diseases.

International Society of Human and Animal Mycology (ISHAM)-ITS reference DNA barcoding database--the quality controlled standard tool for routine identification of human and animal pathogenic fungi.

Gianluigi Cardinali, Duong Vu, Walter Gams, 2015, Medical mycology.

Effective photodynamic treatment of Trichophyton species with Rose Bengal

S. Chen, C. Halliday, J. Houang, 2020, Journal of biophotonics.

Ulocladium atrum Keratitis

R. Mills, D. Ellis, K. Billing, 2006, Journal of Clinical Microbiology.

Molecular diagnosis of Pneumocystis pneumonia in dogs

M. Krockenberger, W. Meyer, R. Malik, 2017, Medical mycology.

Antifungal Susceptibility Testing and Identification.

S. Kidd, C. Halliday, L. Crawford, 2021, Infectious disease clinics of North America.

Responding to the emergence of antifungal drug resistance: perspectives from the bench and the bedside

Tania C Sorrell, J. Beardsley, T. Sorrell, 2018, Future microbiology.

Development and Clinical Application of a Panfungal PCR Assay To Detect and Identify Fungal DNA in Tissue Specimens

T. Sorrell, D. Carter, R. Malik, 2006, Journal of Clinical Microbiology.

In Vitro Activities of Miltefosine and Two Novel Antifungal Biscationic Salts against a Panel of 77 Dermatophytes

O. Lee, T. Sorrell, K. Jolliffe, 2007, Antimicrobial Agents and Chemotherapy.

Thermomyces lanuginosus infective endocarditis: Case report and a review of endocarditis due to uncommon moulds

D. Packham, S. Chen, C. Halliday, 2013, Medical mycology case reports.

Rhinosinusitis in an Australian mare caused by Flavodon flavus, a recently recognized invasive fungal pathogen of the horse

A. Rosenblatt, C. Halliday, R. Allavena, 2019, Journal of veterinary diagnostic investigation : official publication of the American Association of Veterinary Laboratory Diagnosticians, Inc.

Presence of α and a Mating Types in Environmental and Clinical Collections of Cryptococcus neoformans var. gattii Strains from Australia

M. Krockenberger, D. Ellis, R. Malik, 1999, Journal of Clinical Microbiology.

Scedosporium and Lomentospora Infections: Contemporary Microbiological Tools for the Diagnosis of Invasive Disease

M. Hoenigl, W. Meyer, O. Cornely, 2021, Journal of fungi.

Successful treatment of multifocal pedal Prototheca wickerhamii infection in a feline immunodeficiency virus-positive cat with multiple Bowenoid in situ carcinomas containing papillomaviral DNA sequences

R. Malik, J. Munday, C. Halliday, 2017, JFMS open reports.

Antifungal susceptibilities of non-Aspergillus filamentous fungi causing invasive infection in Australia: support for current antifungal guideline recommendations.

S. V. van Hal, D. Marriott, T. Sorrell, 2016, International journal of antimicrobial agents.

Performance of Matrix-Assisted Laser Desorption Ionization−Time of Flight Mass Spectrometry for Identification of Aspergillus, Scedosporium, and Fusarium spp. in the Australian Clinical Setting

A. Lau, S. Chen, C. Halliday, 2016, Journal of Clinical Microbiology.

Clinical Utility of the Cryptococcal Antigen Lateral Flow Assay in a Diagnostic Mycology Laboratory

T. Sorrell, David Judd, B. McMullan, 2012, PloS one.

Development and Clinical Application of a Panfungal PCR Assay To Detect and Identify Fungal DNA in Tissue Specimens (cid:1)

T. Sorrell, D. Carter, S. Chen, 2007 .

Identify Fungal DNA in Tissue Specimens Panfungal PCR Assay To Detect and Development and Clinical Application of a

T. Sorrell, D. Carter, R. Malik, 2007 .

Design issues in a randomized controlled trial of a pre-emptive versus empiric antifungal strategy for invasive aspergillosis in patients with high-risk hematologic malignancies

T. Sorrell, J. Szer, A. Schwarer, 2011, Leukemia & lymphoma.

Azole-resistant Aspergillus fumigatus is highly prevalent in the environment of Vietnam, with marked variability by land use type.

J. Beardsley, T. Sorrell, M. Fisher, 2021, Environmental microbiology.

Clinician response to Candida organisms in the urine of patients attending hospital

O. Lee, T. Sorrell, E. Playford, 2008, European Journal of Clinical Microbiology & Infectious Diseases.

Reverse Line Blot Hybridization Assay for Identiﬁcation of Medically Important Fungi from Culture and Clinical Specimens (cid:1)

T. Sorrell, F. Kong, S. Chen, 2007 .

Clonal Reproduction and Limited Dispersal in an Environmental Population of Cryptococcus neoformans var. gattii Isolates from Australia

D. Carter, C. Halliday, 2003, Journal of Clinical Microbiology.

Simultaneous Detection and Identification of Candida, Aspergillus, and Cryptococcus Species by Reverse Line Blot Hybridization

T. Sorrell, F. Kong, Ying Sun, 2006, Journal of Clinical Microbiology.

Invasive infections due to filamentous fungi other than Aspergillus: epidemiology and determinants of mortality.

D. Marriott, T. Sorrell, W. Meyer, 2015, Clinical microbiology and infection : the official publication of the European Society of Clinical Microbiology and Infectious Diseases.

Molecular Typing of Australian Scedosporium Isolates Showing Genetic Variability and Numerous S. aurantiacum

T. Sorrell, V. Robert, L. Delhaes, 2008, Emerging infectious diseases.

A prickly souvenir from a hedgehog café: tinea manuum secondary to Trichophyton erinacei via international spread

D. Murrell, C. Halliday, S. Kossard, 2020, Clinical and experimental dermatology.

Multiplex Tandem PCR: a Novel Platform for Rapid Detection and Identification of Fungal Pathogens from Blood Culture Specimens

T. Sorrell, J. Iredell, A. Lau, 2008, Journal of Clinical Microbiology.

Descriptions of Medical Fungi

S. Kidd, C. Halliday, David Ellis, 2022 .

Microsphaeropsis arundinis skin and soft tissue infection in renal transplant recipients: three case reports and a review of the literature

G. Rangan, T. Gottlieb, C. Halliday, 2015, Transplant infectious disease : an official journal of the Transplantation Society.

Mucormycosis in Australia: contemporary epidemiology and outcomes.

D. Marriott, T. Sorrell, W. Meyer, 2016, Clinical microbiology and infection : the official publication of the European Society of Clinical Microbiology and Infectious Diseases.

Galactomannan and PCR versus culture and histology for directing use of antifungal treatment for invasive aspergillosis in high-risk haematology patients: a randomised controlled trial.

John Moore, Tania C Sorrell, T. Sorrell, 2013, The Lancet. Infectious diseases.

Clinical utility of Aspergillus galactomannan and PCR in bronchoalveolar lavage fluid for the diagnosis of invasive pulmonary aspergillosis in patients with haematological malignancies.

R. Nation, K. Thursky, J. Seymour, 2014, Diagnostic microbiology and infectious disease.

Pulmonary Cryptococcosis

J. Beardsley, S. Chen, S. Chen, 2015, Seminars in Respiratory and Critical Care Medicine.

PCR Methodology

I. Carter, T. Sloots, P. Giffard, 2010, PCR for Clinical Microbiology.

PCR for clinical microbiology: An Australian and international perspective

Gregory James, I. Carter, T. Sloots, 2010 .

Interlaboratory evaluation of Mucorales PCR assays for testing serum specimens: A study by the fungal PCR Initiative and the Modimucor study group.

L. Millon, F. Hagen, F. Morio, 2020, Medical mycology.

Attitudes of Australasian Clinicians and Laboratory Staff to Changing Fungal Nomenclature: Has Mycological Correctness Really Gone Mad?

S. Kidd, S. Chen, C. Halliday, 2022, Microbiology spectrum.

Whole Genome Sequencing of Candida glabrata for Detection of Markers of Antifungal Drug Resistance.

D. Marriott, T. Sorrell, V. Sintchenko, 2017, Journal of visualized experiments : JoVE.

Assessing Differences between Clinical Isolates of Aspergillus fumigatus from Cases of Proven Invasive Aspergillosis and Colonizing Isolates with Respect to Phenotype (Virulence in Tenebrio molitor Larvae) and Genotype

A. Papanicolaou, C. Morton, S. Chen, 2022, Pathogens.

Concurrent bloodstream infection with Lodderomyces elongisporus and Candida parapsilosis

R. Chan, C. Halliday, Bryant Koh, 2020, Medical mycology case reports.

Assignment of Reference 5’-end 16S rDNA Sequences and Species-Specific Sequence Polymorphisms Improves Species Identification of Nocardia

Vitali Sintchenko, Fanrong Kong, Tania C Sorrell, 2009, The open microbiology journal.

PCR-based tests for the early diagnosis of sepsis. Where do we stand?

A. Ginn, S. Chen, C. Halliday, 2017, Current opinion in infectious diseases.

What’s New in Cryptococcus gattii: From Bench to Bedside and Beyond

J. Beardsley, T. Sorrell, C. Keighley, 2022, Journal of fungi.

Colonisation with Pneumocystis jirovecii in Australian infants

W. Meyer, A. Kesson, S. Chen, 2015, Pathology.

Clinical utility of panfungal polymerase chain reaction for the diagnosis of invasive fungal disease: a single center experience.

D. Spelman, J. Trubiano, S. Chen, 2016, Medical mycology.

Changing epidemiology of candidaemia in Australia

S. V. van Hal, T. Sorrell, C. Keighley, 2016, The Journal of antimicrobial chemotherapy.

Risk factors for candidaemia: A prospective multi‐centre case‐control study

D. Marriott, T. Sorrell, C. Keighley, 2020, Mycoses.

Whole Genome Sequencing of Australian Candida glabrata Isolates Reveals Genetic Diversity and Novel Sequence Types

D. Marriott, T. Sorrell, V. Sintchenko, 2018, Front. Microbiol..

Determining the analytical specificity of PCR‐based assays for the diagnosis of IA: What is Aspergillus?

P. Hamal, A. Caliendo, L. Millon, 2016, Medical mycology.

Diagnosis, management and prevention of Candida auris in hospitals: position statement of the Australasian Society for Infectious Diseases

D. Marriott, S. Kidd, A. Morris, 2019, Internal medicine journal.

Stimulation with lysates of Aspergillus terreus, Candida krusei and Rhizopus oryzae maximizes cross-reactivity of anti-fungal T cells.

T. Sorrell, W. Meyer, Balaji Virassamy, 2016, Cytotherapy.

Nosocomial Pneumocystis jirovecii Pneumonia: Lessons From a Cluster in Kidney Transplant Recipients

G. Wong, K. Kable, W. Meyer, 2011, Transplantation.

Surveillance for azole resistance in clinical and environmental isolates of Aspergillus fumigatus in Australia and cyp51A homology modelling of azole-resistant isolates

D. Hibbs, T. Sorrell, D. Carter, 2018, The Journal of antimicrobial chemotherapy.

Verruconis gallopava cardiac and endovascular infection with dissemination after renal transplantation: Case report and lessons learned☆☆☆

G. Wong, K. Kable, J. Kok, 2016, Medical mycology case reports.

Epidemiology, Modern Diagnostics, and the Management of Mucorales Infections

J. Beardsley, S. Chen, C. Halliday, 2023, Journal of fungi.

Evaluation of a custom Sensititre YeastOne plate for susceptibility testing of isavuconazole and other antifungals against clinically relevant yeast and mould species in three Australian diagnostic mycology laboratories.

S. Chen, C. Halliday, G. F. Weldhagen, 2022, Pathology.

Panfungal PCR on formalin-fixed, paraffin-embedded tissue: to proceed or not proceed?

C. Halliday, Rebecca Sparks, Wendy Green, 2023, Pathology.

Colony Multiplex-Tandem PCR for Rapid, Accurate Identification of Fungal Cultures

O. Lee, T. Sorrell, A. Lau, 2008, Journal of Clinical Microbiology.

Genetic Heterogeneity of Australian Candida auris Isolates: Insights From a Nonoutbreak Setting Using Whole-Genome Sequencing

V. Sintchenko, D. Eyre, A. Chakrabarti, 2020, Open forum infectious diseases.

Antifungal susceptibility testing in Australasian clinical laboratories: we must improve our performance.

S. Kidd, A. Morris, S. Chen, 2018, Pathology.

Time-to-positivity in bloodstream infection for Candida species as a prognostic marker for mortality

S. V. van Hal, T. Sorrell, C. Keighley, 2023, Medical mycology.

Galactomannan and PCR versus culture and histology for directing use of antifungal treatment for invasive aspergillosis in high-risk haematology patients: a randomised controlled trial.

T. Sorrell, J. Szer, A. Schwarer, 2013, The Lancet. Infectious diseases.

Whole Genome Sequencing of Candida glabrata for Detection of Markers of Antifungal Drug Resistance.

D. Marriott, T. Sorrell, V. Sintchenko, 2017, Journal of visualized experiments : JoVE.

Pulmonary Cryptococcosis

J. Beardsley, S. Chen, C. Halliday, 2022, Journal of fungi.

Identification of genetic markers of resistance to echinocandins, azoles and 5-fluorocytosine in Candida glabrata by next-generation sequencing: a feasibility study.

V. Sintchenko, E. Playford, C. Halliday, 2017, Clinical microbiology and infection : the official publication of the European Society of Clinical Microbiology and Infectious Diseases.

Consensus guidelines for the diagnosis and management of invasive aspergillosis, 2021

A. Bajel, C. Halliday, O. Lavee, 2021, Internal medicine journal.

Outbreaks of Fungal Infections in Hospitals: Epidemiology, Detection, and Management

C. Halliday, Abby P. Douglas, Adam G. Stewart, 2023, Journal of fungi.

Knowledge at what cost? An audit of the utility of panfungal PCR performed on bronchoalveolar lavage fluid specimens at a tertiary mycology laboratory.

J. Kok, V. Ahuja, S. Chen, 2020, Pathology.

New Names for Fungi of Medical Importance: Can We Have Our Cake and Eat It Too?

S. Kidd, B. McMullan, S. Chen, 2020, Journal of Clinical Microbiology.

Sinonasal and sino-orbital aspergillosis in 23 cats: aetiology, clinicopathological features and treatment outcomes.

M. Krockenberger, J. Beatty, V. Barrs, 2012, Veterinary journal.

Phaeohyphomycosis in Kidney Transplant Recipients: Highlighting the Importance of Early Recognition and Surgical Debridement

G. Wong, H. Pleass, C. Halliday, 2022, Transplantation direct.