Gabriel Moreno-Hagelsieb

发表

Genomics of Gene Regulation: The View from Escherichia coli

César Bonavides-Martínez, Socorro Gama-Castro, David A. Rosenblueth, 2002, Gene Regulations and Metabolism.

Open resource metagenomics

Gabriel Moreno-Hagelsieb, Josh D. Neufeld, Katja Engel, 2011 .

Alice in wonderland or biology among the computational sciences

Gabriel Moreno-Hagelsieb, Gregory Vey, G. Moreno-Hagelsieb, 2009 .

GeConT 2: gene context analysis for orthologous proteins, conserved domains and metabolic pathways

Enrique Merino, Ricardo Ciria, Cristian E. Martinez-Guerrero, 2008, Nucleic Acids Res..

Phylogenomic clustering for selecting non-redundant genomes for comparative genomics

Gabriel Moreno-Hagelsieb, Zilin Wang, Stephanie Walsh, 2013, Bioinform..

Modelling Dynamics of Genetic Networks as a Multiscale Process

Roderick V. N. Melnik, Gabriel Moreno-Hagelsieb, Xilin Wei, 2005, International Conference on Computational Science.

Progress in quickly finding orthologs as reciprocal best hits: comparing blast, last, diamond and MMseqs2

Gabriel Moreno-Hagelsieb, Julie Hernández-Salmerón, G. Moreno-Hagelsieb, 2020, BMC Genomics.

Choosing BLAST options for better detection of orthologs as reciprocal best hits

Gabriel Moreno-Hagelsieb, Kristen Latimer, G. Moreno-Hagelsieb, 2008, Bioinform..

The Transporter Classification Database (TCDB): recent advances

Milton H. Saier, Muhammad Saad Ahmed, Gabriel Moreno-Hagelsieb, 2015, Nucleic Acids Res..

A powerful non-homology method for the prediction of operons in prokaryotes

Julio Collado-Vides, Gabriel Moreno-Hagelsieb, J. Collado-Vides, 2002, ISMB.

The functional landscape bound to the transcription factors of Escherichia coli K-12

Ernesto Pérez-Rueda, Gabriel Moreno-Hagelsieb, Yalbi Itzel Balderas-Martínez, 2015, Comput. Biol. Chem..

Meeting Report: 1st International Functional Metagenomics Workshop May 7–8, 2012, St. Jacobs, Ontario, Canada.

David A. Mead, Svein Valla, Gabriel Moreno-Hagelsieb, 2013, Standards in genomic sciences.

The Transporter Classification Database (TCDB): 2021 update

Milton H. Saier, Gabriel Moreno-Hagelsieb, Vamsee S. Reddy, 2020, Nucleic Acids Res..

Phylogenetic Distribution and Evolutionary History of Bacterial DEAD-Box Proteins

Gabriel Moreno-Hagelsieb, G. Moreno-Hagelsieb, L. Alcaraz, 2011, Journal of Molecular Evolution.

Nebulon: a system for the inference of functional relationships of gene products from the rearrangement of predicted operons

Julio Collado-Vides, Sarath Chandra Janga, Gabriel Moreno-Hagelsieb, 2005, Nucleic acids research.

Evaluating Bias of Illumina-Based Bacterial 16S rRNA Gene Profiles

Michael W. Hall, Gabriel Moreno-Hagelsieb, Josh D. Neufeld, 2014, Applied and Environmental Microbiology.

The distinctive signatures of promoter regions and operon junctions across prokaryotes

Sarath Chandra Janga, Gabriel Moreno-Hagelsieb, Araceli M. Huerta, 2006, Nucleic acids research.

Operons and the effect of genome redundancy in deciphering functional relationships using phylogenetic profiles

Sarath Chandra Janga, Gabriel Moreno-Hagelsieb, S. Janga, 2007, Proteins.

The mosaic structure of the symbiotic plasmid of Rhizobium etli CFN42 and its relation to other symbiotic genome compartments

Julio Collado-Vides, Heladia Salgado, Gabriel Moreno-Hagelsieb, 2003, Genome Biology.

Evaluation of thresholds for the detection of binding sites for regulatory proteins in Escherichia coli K12 DNA

Julio Collado-Vides, Gabriel Moreno-Hagelsieb, Esperanza Benítez-Bellón, 2002, Genome Biology.

Conservation of adjacency as evidence of paralogous operons.

Sarath Chandra Janga, Gabriel Moreno-Hagelsieb, S. Janga, 2004, Nucleic acids research.

The partitioned Rhizobium etli genome: genetic and metabolic redundancy in seven interacting replicons.

Julio Collado-Vides, Verónica Jiménez-Jacinto, Sarath Chandra Janga, 2006, Proceedings of the National Academy of Sciences of the United States of America.

Remote homology and the functions of metagenomic dark matter

Gabriel Moreno-Hagelsieb, Andrew C. Doxey, Briallen Lobb, 2015, Front. Genet..

eSGA: E. coli synthetic genetic array analysis

Huiming Ding, Andrew Emili, Gabriel Moreno-Hagelsieb, 2008, Nature Methods.

Whole-genome expression profiling defines the HrpL regulon of Pseudomonas syringae pv. tomato DC3000, allows de novo reconstruction of the Hrp cis clement, and identifies novel coregulated genes.

Monica Vencato, Alan Collmer, Gabriel Moreno-Hagelsieb, 2006, Molecular plant-microbe interactions : MPMI.