A. Valsamakis

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Derivation of a clinical prediction rule to predict hospitalization for influenza in EDs.

Y. Hsieh, R. Rothman, C. Gaydos, 2013, The American journal of emergency medicine.

Measles virus infection of B lymphocytes permits cellular activation but blocks progression through the cell cycle

A. Fauci, M. Oldstone, J. Kehrl, 1987, Journal of virology.

Clinical performance of the GenMark Dx ePlex respiratory pathogen panels for upper and lower respiratory tract infections.

K. Carroll, H. Mostafa, A. Valsamakis, 2021, Journal of clinical virology : the official publication of the Pan American Society for Clinical Virology.

Application of the Hybrid Capture 2 assay to squamous cell carcinomas of the head and neck

J. Bishop, W. Westra, S. Pai, 2012, Cancer cytopathology.

Clinical diagnosis of influenza in the ED.

A. Dugas, R. Rothman, Peter Alarcon Manchego, 2015, The American journal of emergency medicine.

Clinical Diagnosis of Influenza in the Emergency Department

A. Dugas, R. Rothman, Annum Faisal, 2015 .

Severe pandemic H1N1 and seasonal influenza in children and young adults with sickle cell disease.

J. Strouse, D. Bundy, J. Casella, 2010, Blood.

CLINICAL ADVANCES IN LIVER, PANCREAS, AND BILIARY TRACT The Combination of Ribavirin and Peginterferon Is Superior to Peginterferon and Placebo for Children and Adolescents With Chronic Hepatitis C

P. Rosenthal, B. Barton, Z. Goodman, 2011 .

Molecular Detection and Characterization of Hepatitis C Virus

A. Valsamakis, M. Forman, 2011 .

Arenaviruses

A. Valsamakis, F. A. Murphy, 1987, Current Topics in Microbiology and Immunology.

State of viral genome and proteins during persistent lymphocytic choriomeningitis virus infection.

M. Oldstone, P. Southern, A. Valsamakis, 1987, Current topics in microbiology and immunology.

Differential CMV-Specific CD8+ Effector T Cell Responses in the Lung Allograft Predominate over the Blood during Human Primary Infection1

S. Migueles, M. Connors, J. Orens, 2008, The Journal of Immunology.

Primary Infection Predominate over the Blood during Human Cell Responses in the Lung Allograft Effector T + Differential CMV-Specific CD 8 Migueles

S. Migueles, M. Connors, J. Orens, 2008 .

Modulation of disease, T cell responses, and measles virus clearance in monkeys vaccinated with H-encoding alphavirus replicon particles.

F. Polack, D. Griffin, C. Greer, 2005, Proceedings of the National Academy of Sciences of the United States of America.

Perturbation of differentiated functions in vivo during persistent viral infection. III. Decreased growth hormone mRNA.

M. Oldstone, Y. Rivière, A. Valsamakis, 1987, Virology.

Measles virus and C3 binding sites are distinct on membrane cofactor protein (CD46).

J. Atkinson, D. Lublin, D. Lublin, 1995, Proceedings of the National Academy of Sciences of the United States of America.

Clinical Accuracy of a PLEX-ID Flu Device for Simultaneous Detection and Identification of Influenza Viruses A and B

R. Rothman, C. Gaydos, J. Chappell, 2012, Journal of Clinical Microbiology.

Elements upstream of the AAUAAA within the human immunodeficiency virus polyadenylation signal are required for efficient polyadenylation in vitro

J. Alwine, A. Valsamakis, N. Schek, 1992, Molecular and cellular biology.

Evaluation of the Xpert Flu Rapid PCR Assay in High-Risk Emergency Department Patients

A. Dugas, R. Rothman, C. Gaydos, 2014, Journal of Clinical Microbiology.

Required for Efficient Polyadenylation In Vitro

J. Alwine, A. Valsamakis, N. Schek, 2022 .

Epidemiology of respiratory viruses in children admitted to an infant/toddler unit.

T. Perl, A. Milstone, A. Valsamakis, 2012, American journal of infection control.

Low Prevalence of Pertussis Among Children Admitted With Respiratory Symptoms During Respiratory Syncytial Virus Season

T. Perl, G. Siberry, T. Ross, 2006, Infection Control & Hospital Epidemiology.

Production of atypical measles in rhesus macaques: Evidence for disease mediated by immune complex formation and eosinophils in the presence of fusion-inhibiting antibody

F. Polack, D. Griffin, P. Auwaerter, 1999, Nature Medicine.

Molecular diagnostics for existing and emerging infections. Complementary tools for a new era of clinical microbiology.

J. Dumler, A. Valsamakis, 1999, American journal of clinical pathology.

Clinical Isolates of Measles Virus Use CD46 as a Cellular Receptor

W. Bellini, P. Rota, R. Fernández-Muñoz, 2000, Journal of Virology.

Diagnostic performance of two highly multiplexed respiratory virus assays in a pediatric cohort

C. Gaydos, A. Milstone, Sonali D. Advani, 2012, Journal of Clinical Virology.

The clinical significance of EBV DNA in the plasma and peripheral blood mononuclear cells of patients with or without EBV diseases.

A. Massie, R. Ambinder, C. Durand, 2016, Blood.

Optimization and Evaluation of a Novel Real-Time RT-PCR Test for Detection of Parechovirus in Cerebrospinal Fluid.

Baoming Liu, A. Valsamakis, M. Forman, 2019, Journal of virological methods.

Successful DNA immunization against measles: Neutralizing antibody against either the hemagglutinin or fusion glycoprotein protects rhesus macaques without evidence of atypical measles

F. Polack, D. Griffin, H. Robinson, 2000, Nature Medicine.

Diagnosis and monitoring of HCV infection using the cobas® HCV test for use on the cobas® 6800/8800 systems.

E. Paxinos, S. Young, G. Heilek, 2018, Journal of clinical virology : the official publication of the Pan American Society for Clinical Virology.

Variability of hepatitis E serologic assays in a pediatric liver transplant recipient: challenges to diagnosing hepatitis E virus infection in the United States

J. Ticehurst, K. Nelson, K. Schwarz, 2015, Transplant infectious disease : an official journal of the Transplantation Society.

BK Virus Replication in Patients with Anti-Neutrophil Cytoplasmic Antibody-Associated Vasculitis

S. Ghazarian, P. Seo, D. Geetha, 2013, American Journal of Nephrology.

A Clinical Algorithm Identifies High Risk Pediatric Oncology and Bone Marrow Transplant Patients Likely to Benefit From Treatment of Adenoviral Infection

Allen R. Chen, A. Agwu, D. Loeb, 2009, Journal of pediatric hematology/oncology.

Comparison of Automated and Manual Nucleic Acid Extraction Methods for Detection of Enterovirus RNA

A. Valsamakis, M. Forman, Melissa Geahr, 2003, Journal of Clinical Microbiology.

Specimen Collection, Transport, and Processing: Virology

Michael Forman, Alexandra Valsamakis, A. Valsamakis, 2011 .

A Polymerase Chain Reaction-Based Algorithm to Detect and Prevent Transmission of Adenoviral Conjunctivitis in Hospital Employees.

A. Valsamakis, M. Forman, I. Kuo, 2016, American journal of ophthalmology.

Rapid identification viruses from nasal pharyngeal aspirates in acute viral respiratory infections by RT-PCR and electrospray ionization mass spectrometry

D. Ecker, R. Sampath, L. Blyn, 2011, Journal of Virological Methods.

Detection and Prevalence of Adenoviral Conjunctivitis among Hospital Employees Using Real-Time Polymerase Chain Reaction as an Infection Prevention Tool

L. Maragakis, A. Valsamakis, M. Forman, 2014, Infection Control & Hospital Epidemiology.

Neuroattenuated bunyavirus variant: derivation, characterization, and revertant clones

M. Endres, N. Nathanson, F. González-Scarano, 1990, Journal of virology.

Molecular Testing in the Diagnosis and Management of Chronic Hepatitis B

Alexandra Valsamakis, A. Valsamakis, 2007, Clinical Microbiology Reviews.

Chronic Hepatitis B, C, and D.

A. Valsamakis, B. Cobb, 2016, Microbiology spectrum.

Comparison of Hepatitis B Virus Infection in HIV-Infected and HIV-Uninfected Participants Enrolled in a Multinational Clinical Trial: HPTN 052

C. Thio, M. Hosseinipour, B. Grinsztejn, 2017, Journal of acquired immune deficiency syndromes.

Outcomes in Transplant Recipients Treated With Foscarnet for Ganciclovir-Resistant or Refractory Cytomegalovirus Infection

P. Shah, R. Avery, S. Shoham, 2016, Transplantation.

Multilaboratory Evaluation of Real-Time PCR Tests for Hepatitis B Virus DNA Quantification

A. Caliendo, J. Bremer, N. Lurain, 2011, Journal of Clinical Microbiology.

Evaluation of an automated, highly sensitive, real-time PCR-based assay (COBAS Ampliprep/COBAS TaqMan) for quantification of HCV RNA.

B. Gärtner, S. Zeuzem, C. Sarrazin, 2008, Journal of clinical virology : the official publication of the Pan American Society for Clinical Virology.

The combination of ribavirin and peginterferon is superior to peginterferon and placebo for children and adolescents with chronic hepatitis C.

Alexandra Valsamakis, P. Rosenthal, B. Barton, 2011, Gastroenterology.

Outcomes of transplant recipients treated with cidofovir for resistant or refractory cytomegalovirus infection

R. Avery, S. Shoham, R. Ambinder, 2020, Transplant infectious disease : an official journal of the Transplantation Society.

Cytomegalovirus DNA Quantification Using an Automated Platform for Nucleic Acid Extraction and Real-Time PCR Assay Setup

A. Valsamakis, M. Forman, Andy Wilson, 2011, Journal of Clinical Microbiology.

Rational genomic optimization of DNA detection for human papillomavirus type 16 in head and neck squamous cell carcinoma

A. Favorov, J. Califano, K. Fisch, 2019, Head & neck.

The human immunodeficiency virus type 1 polyadenylylation signal: a 3' long terminal repeat element upstream of the AAUAAA necessary for efficient polyadenylylation.

J. Alwine, S. Zeichner, S. Carswell, 1991, Proceedings of the National Academy of Sciences of the United States of America.

Recombinant Measles Viruses with Mutations in the C, V, or F Gene Have Altered Growth Phenotypes In Vivo

M. Billeter, D. Griffin, H. Schneider, 1998, Journal of Virology.

Comparison of BKV quantification using a single automated nucleic acid extraction platform and 3 real-time PCR assays.

A. Valsamakis, M. Forman, A. Greer, 2015, Diagnostic microbiology and infectious disease.

Detection of cytomegalovirus DNA in plasma as an adjunct diagnostic for gastrointestinal tract disease in kidney and liver transplant recipients.

R. Avery, K. Marr, D. Durand, 2013, Clinical infectious diseases : an official publication of the Infectious Diseases Society of America.

Performance characteristics of a quantitative hepatitis C virus RNA assay using COBAS AmpliPrep total nucleic acid isolation and COBAS taqman hepatitis C virus analyte-specific reagent.

A. Valsamakis, M. Forman, 2008, The Journal of molecular diagnostics : JMD.

Verification of an Assay for Quantification of Hepatitis C Virus RNA by Use of an Analyte-Specific Reagent and Two Different Extraction Methods

A. Valsamakis, M. Forman, 2004, Journal of Clinical Microbiology.

Cytomegalovirus in Adult Allogeneic Blood and Marrow Transplant Patients Before or Around the Period of Neutrophil Recovery: A Single-Center, Retrospective, Descriptive Study

Richard J. Jones, D. Gladstone, R. Avery, 2020, Open forum infectious diseases.

Erratum: Successful DNA immunization against measles: Neutralizing antibody against either the hemagglutinin or fusion glycoprotein protects rhesus macaques without evidence of atypical measles (Nature Medicine (2000) 6 (776-781))

F. Polack, D. Griffin, H. Robinson, 2000 .

Detecting Respiratory Viruses in Asymptomatic Children

Arnab Sengupta, A. Milstone, Sonali D. Advani, 2012, The Pediatric infectious disease journal.

Multicenter Comparison of Different Real-Time PCR Assays for Quantitative Detection of Epstein-Barr Virus

M. Nikiforova, H. Balfour, S. Pounds, 2007, Journal of Clinical Microbiology.

Altered Virulence of Vaccine Strains of Measles Virus after Prolonged Replication in Human Tissue

D. Griffin, B. Rima, P. Auwaerter, 1999, Journal of Virology.

Early studies on DNA-based immunizations for measles virus.

D. Griffin, H. Robinson, F. Mustafa, 1997, Vaccine.

Multicenter Evaluation of a Commercial Cytomegalovirus Quantitative Standard: Effects of Commutability on Interlaboratory Concordance

A. Caliendo, J. Preiksaitis, J. Boonyaratanakornkit, 2013, Journal of Clinical Microbiology.

An International Multicenter Performance Analysis of Cytomegalovirus Load Tests

L. Cardeñoso, B. Pinsky, H. Hirsch, 2012, Clinical infectious diseases : an official publication of the Infectious Diseases Society of America.

An outbreak of human parainfluenza virus 3 infection in an outpatient hematopoietic stem cell transplantation clinic.

T. Perl, S. Munshaw, D. Neofytos, 2012, American journal of infection control.

Elements Upstream oftheAAUAAA within theHuman Immunodeficiency VirusPolyadenylation Signal Are Required forEfficient Polyadenylation InVitro

A. Valsamakis, N. Schek, 1992 .

The critically ill child with novel H1N1 influenza A: A case series*

T. Perl, D. Nichols, W. Fischer, 2010, Pediatric critical care medicine : a journal of the Society of Critical Care Medicine and the World Federation of Pediatric Intensive and Critical Care Societies.

Molecular Testing for Chlamydia trachomatis and Neisseria gonorrhoeae

A. Valsamakis, 2006 .

Respiratory Syncytial Virus Detection by Remel Xpect, Binax Now RSV, Direct Immunofluorescent Staining, and Tissue Culture

A. Valsamakis, A. Borek, Deborah Z Aird, 2006, Journal of Clinical Microbiology.

Multicenter Evaluation of the Performance Characteristics of the Bayer VERSANT HCV RNA 3.0 Assay (bDNA)

T. Elbeik, N. Terrault, V. Ng, 2004, Journal of Clinical Microbiology.

Multilaboratory Comparison of Hepatitis C Virus Viral Load Assays

A. Caliendo, J. Bremer, N. Lurain, 2006, Journal of Clinical Microbiology.

Increased sensitivity of the Roche COBAS AMPLICOR HCV test, version 2.0, using modified extraction techniques.

A. Valsamakis, M. Forman, 2004, The Journal of molecular diagnostics : JMD.

Linkage to Care, Antiretroviral Treatment Initiation, and Viral Suppression of Acute HIV-Infected Individuals Identified From an Emergency Department-Based HIV Screening and Linkage-to-Care Program.

M. Saheed, Y. Hsieh, R. Rothman, 2018, Annals of emergency medicine.

An HIV Diagnostic Testing Algorithm Using the cobas HIV-1/HIV-2 Qualitative Assay for HIV Type Differentiation and Confirmation

K. Tashima, G. Aldrovandi, A. Avery, 2021, Journal of Clinical Microbiology.

Routine HIV Test Results in 6 US Clinical Laboratories Using the Recommended Laboratory HIV Testing Algorithm With Geenius HIV 1/2 Supplemental Assay.

Y. Wang, P. Chavez, Alexander Katayev, 2020, Sexually transmitted diseases.

Hepatitis E Virus Infection Among Solid Organ Transplant Recipients at a North American Transplant Center

J. Ticehurst, R. Montgomery, K. Nelson, 2014, Open forum infectious diseases.

Reverse transcription polymerase chain reaction and electrospray ionization mass spectrometry for identifying acute viral upper respiratory tract infections

D. Ecker, R. Sampath, L. Blyn, 2011, Diagnostic Microbiology and Infectious Disease.

Dried urine spots for detection and quantification of cytomegalovirus in newborns.

R. Arav-Boger, A. Valsamakis, M. Forman, 2012, Diagnostic microbiology and infectious disease.

Clinical outcomes of seasonal influenza and pandemic influenza A (H1N1) in pediatric inpatients

S. Cosgrove, P. Tamma, T. Perl, 2010, BMC pediatrics.

The effect of a genetic variant on quantitative real-time PCR in a case of disseminated adenovirus infection.

T. Gniadek, R. Arav-Boger, A. Valsamakis, 2017, Diagnostic microbiology and infectious disease.

The combination of ribavirin and peginterferon is superior to peginterferon and placebo for children and adolescents with chronic hepatitis C.

P. Rosenthal, B. Barton, Z. Goodman, 2011, Gastroenterology.

Editorial Commentary: Standardization of Viral Load Testing for Cytomegalovirus: The Long Road Just Got Longer.

A. Valsamakis, 2016, Clinical infectious diseases : an official publication of the Infectious Diseases Society of America.

Lead Time to Recurrence After Posttreatment Plasma and Saliva HPV DNA Testing in Patients With Low-Risk HPV Oropharynx Cancer.

J. Califano, H. Mostafa, Xinlian Zhang, 2023, JAMA otolaryngology-- head & neck surgery.

Chronic Hepatitis B, C, and D

A. Valsamakis, B. Cobb, 2016, Microbiology spectrum.

Strains of measles vaccine differ in their ability to replicate in an damage human thymus.

D. Griffin, H. Kaneshima, A. Valsamakis, 2001, The Journal of infectious diseases.

The critically ill child with novel H1N1 influenza A: A case series*

Multicenter Study of Clinical Performance of the 3M Rapid Detection RSV Test

C. Ginocchio, G. Storch, A. McAdam, 2010, Journal of Clinical Microbiology.