Leopold Parts

发表

Additional file 13: of Quantitative CRISPR interference screens in yeast identify chemical-genetic interactions and new rules for guide RNA design

Justin D. Smith, Sundari Suresh, Ulrich Schlecht, 2016 .

Minimal genome-wide human CRISPR-Cas9 library

Leopold Parts, Felicity Allen, Francesco Iorio, 2019, bioRxiv.

Minimized double guide RNA libraries enable scale-limited CRISPR/Cas9 screens

Leopold Parts, Yan Zhou, Felicity Allen, 2019, bioRxiv.

Additional file 19: of Quantitative CRISPR interference screens in yeast identify chemical-genetic interactions and new rules for guide RNA design

Justin D. Smith, Sundari Suresh, Ulrich Schlecht, 2016 .

SGAtools: one-stop analysis and visualization of array-based genetic interaction screens

Leopold Parts, Omar Wagih, Michael Costanzo, 2013, Nucleic Acids Res..

Session introduction

Leopold Parts, Oliver Stegle, Steven E. Brenner, 2003, Pacific Symposium on Biocomputing.

Segmenting nuclei in brightfield images with neural networks

Leopold Parts, Dmytro Fishman, Jan Wildenhain, 2019, bioRxiv.

Additional file 3: of Quantitative CRISPR interference screens in yeast identify chemical-genetic interactions and new rules for guide RNA design

Justin D. Smith, Sundari Suresh, Ulrich Schlecht, 2016 .

Additional file 19: of Quantitative CRISPR interference screens in yeast identify chemical-genetic interactions and new rules for guide RNA design

Justin D. Smith, Sundari Suresh, Ulrich Schlecht, 2016 .

Computational biology: deep learning

Leopold Parts, William Jones, Dmytro Fishman, 2017, Emerging topics in life sciences.

Agreement between two large pan-cancer CRISPR-Cas9 gene dependency data sets

Leopold Parts, Todd R. Golub, John G. Doench, 2019, Nature Communications.

Noise2Stack: Improving Image Restoration by Learning from Volumetric Data pdf

Leopold Parts, Dmytro Fishman, Kaupo Palo, 2020, MLMIR@MICCAI.

Prediction of antibiotic resistance in Escherichia coli from large-scale pan-genome data

Leopold Parts, Ville Mustonen, Martin Palm, 2018, PLoS Comput. Biol..

A Bayesian Framework to Account for Complex Non-Genetic Factors in Gene Expression Levels Greatly Increases Power in eQTL Studies

Leopold Parts, Oliver Stegle, John M. Winn, 2010, PLoS Comput. Biol..

Additional file 16: of Quantitative CRISPR interference screens in yeast identify chemical-genetic interactions and new rules for guide RNA design

Justin D. Smith, Sundari Suresh, Ulrich Schlecht, 2016 .

Differential methylation of the TRPA1 promoter in pain sensitivity

Chrysanthi Ainali, Frank O. Nestle, Sophia Tsoka, 2014, Nature Communications.

Accurate classification of protein subcellular localization from high throughput microscopy images using deep learning

Leopold Parts, Tanel Pärnamaa, 2016 .

Mutations generated by repair of Cas9-induced double strand breaks are predictable from surrounding sequence

Leopold Parts, Vitalii Kleshchevnikov, Stephen P. Jackson, 2018, bioRxiv.

Predicting quantitative traits from genome and phenome with near perfect accuracy

Leopold Parts, Kaspar Märtens, Johan Hallin, 2015, Nature Communications.

Population genomics of domestic and wild yeasts

Leopold Parts, Anders Blomberg, Casey M. Bergman, 2008 .

Quantitative CRISPR interference screens in yeast identify chemical-genetic interactions and new rules for guide RNA design

Sundari Suresh, Ulrich Schlecht, Omar Wagih, 2016, Genome Biology.

Assessing the complex architecture of polygenic traits in diverged yeast populations

Leopold Parts, Anders Blomberg, Francisco A. Cubillos, 2011, Molecular ecology.

Simultaneous assay of every Salmonella Typhi gene using one million transposon mutants.

Leopold Parts, Julian Parkhill, Gemma C. Langridge, 2009, Genome research.

High-Resolution Mapping of Complex Traits with a Four-Parent Advanced Intercross Yeast Population

Leopold Parts, Christopher J. R. Illingworth, Ville Mustonen, 2013, Genetics.

JACKS: joint analysis of CRISPR/Cas9 knock-out screens

Leopold Parts, Francesco Iorio, Kosuke Yusa, 2018 .

A High-Definition View of Functional Genetic Variation from Natural Yeast Genomes

Leopold Parts, Ville Mustonen, Jared T. Simpson, 2014, Molecular biology and evolution.

Consortium, G.P A map of human genome variation from population-scale sequencing. Nature 467, 1061-1073

Ken Chen, Joshua M. Korn, Afidalina Tumian, 2010 .

Gene expression changes with age in skin, adipose tissue, blood and brain

Leopold Parts, David A. Knowles, Richard Durbin, 2013, Genome Biology.

Accurate Classification of Protein Subcellular Localization from High-Throughput Microscopy Images Using Deep Learning

Leopold Parts, Tanel Pärnamaa, Tanel Pärnamaa, 2016, G3: Genes, Genomes, Genetics.