M. Rojas

发表

Microbiome interaction networks and community structure from lab-reared and field-collected Aedes aegypti, Aedes albopictus, and Culex quinquefasciatus mosquito vectors

Miguel A. Saldaña, Y. Fofanov, G. Hughes, 2018, bioRxiv.

Small Regulatory RNAs of Rickettsia conorii

A. Sahni, Y. Fofanov, K. Khanipov, 2016, Scientific Reports.

Co-Evolution of the Influenza Virus and Its Hosts

Yuriy Fofanov, Paul Havlak, Stephen Huff, 2010, BIOCOMP.

The presence of nitrate dramatically changed the predominant microbial community in perchlorate degrading cultures under saline conditions

G. Fox, V. Stepanov, R. Willson, 2014, BMC Microbiology.

Bacterial small RNAs in the Genus Rickettsia

A. Sahni, Y. Fofanov, T. Wood, 2015, BMC Genomics.

Bacterial small RNAs in the Genus Rickettsia

A. Sahni, Y. Fofanov, T. Wood, 2015, BMC Genomics.

Microbiome Interaction Networks and Community Structure From Laboratory-Reared and Field-Collected Aedes aegypti, Aedes albopictus, and Culex quinquefasciatus Mosquito Vectors

Miguel A. Saldaña, Y. Fofanov, G. Hughes, 2018, bioRxiv.

The ability of human nuclear DNA to cause false positive low-abundance heteroplasmy calls varies across the mitochondrial genome

I. Pavlidis, S. Chumakov, Y. Fofanov, 2016, BMC Genomics.

Mosquito bottlenecks alter viral mutant swarm in a tissue and time-dependent manner with contraction and expansion of variant positions and diversity

Y. Fofanov, N. Forrester, E. I. Patterson, 2018, Virus evolution.

The presence of nitrate dramatically changed the predominant microbial community in perchlorate degrading cultures under saline conditions

G. Fox, V. Stepanov, R. Willson, 2014, BMC Microbiology.

Metagenomic Analysis of the Airborne Environment in Urban Spaces

Jonathan E. Allen, Nicholas A. Be, James B Thissen, 2014, Microbial Ecology.

PIQA: pipeline for Illumina G1 genome analyzer data quality assessment

Yuriy Fofanov, Paul Havlak, Chen Feng, 2009, Bioinform..

The ability of human nuclear DNA to cause false positive low-abundance heteroplasmy calls varies across the mitochondrial genome

I. Pavlidis, Y. Fofanov, W. Widger, 2016, BMC Genomics.

Longitudinal Metagenomic Analysis of the Water and Soil from Gulf of Mexico Beaches Affected by the Deep Water Horizon Oil Spill

Yuriy Fofanov, Viacheslav Y. Fofanov, Efren Ballesteros, 2011 .

Development and Characterization of a Highly Specific and Sensitive SYBR Green Reverse Transcriptase PCR Assay for Detection of the 2009 Pandemic H1N1 Influenza Virus on the Basis of Sequence Signatures

Yuriy Fofanov, Stephen Huff, Mark Rojas, 2010, Journal of Clinical Microbiology.

Using High Throughput DNA Sequencing to Evaluate the Accuracy of Serial Dilution Based Tests of Microbial Activities in Oil Pipelines

Y. Fofanov, W. Widger, K. Khanipov, 2018, bioRxiv.

Identification and Characterization of Novel Small RNAs in Rickettsia prowazekii

A. Sahni, Y. Fofanov, K. Khanipov, 2016, Front. Microbiol..

Slim-Filter: an interactive windows-based application for illumina genome analyzer data assessment and manipulation

Kamil Khanipov, Yuriy Fofanov, Efren Ballesteros, 2012, BMC Bioinformatics.

CoCo: An application to store High-Throughput Sequencing data in compact text and binary file formats

Levent Albayrak, Kamil Khanipov, Yuriy Fofanov, 2015, 2015 IEEE International Conference on Bioinformatics and Biomedicine (BIBM).

Secondary Analysis of the NCI-60 Whole Exome Sequencing Data Indicates Significant Presence of Propionibacterium acnes Genomic Material in Leukemia (RPMI-8226) and Central Nervous System (SF-295, SF-539, and SNB-19) Cell Lines

A. Strongin, S. Chumakov, Y. Fofanov, 2015, PloS one.