Zoya Ignatova

发表

A flexible approach to assess fluorescence decay functions in complex energy transfer systems

Christopher J. Roethlein, Christoph Roethlein, Markus S Miettinen, 2015, BMC biophysics.

Autonomous DNA Models

Karl-Heinz Zimmermann, Zoya Ignatova, Israel Martínez-Pérez, 2008 .

Computational genes: a tool for molecular diagnosis and therapy of aberrant mutational phenotype

Gong Zhang, Karl-Heinz Zimmermann, Zoya Ignatova, 2007, BMC Bioinformatics.

Theoretical Computer Science

Karl-Heinz Zimmermann, Zoya Ignatova, Israel Martínez-Pérez, 2008 .

An autonomous DNA model for finite state automata

Karl-Heinz Zimmermann, Zoya Ignatova, Israel Mark Martínez-Pérez, 2009, Int. J. Bioinform. Res. Appl..

Biomolecular autonomous solution of the Hamiltonian path problem via hairpin formation

Gong Zhang, Karl-Heinz Zimmermann, Zoya Ignatova, 2005, Int. J. Bioinform. Res. Appl..

smORFer: a modular algorithm to detect small ORFs in prokaryotes

Baban S. Kolte, Zoya Ignatova, Stephan Fuchs, 2020, bioRxiv.

Word Design for DNA Computing

Karl-Heinz Zimmermann, Zoya Ignatova, Israel Martínez-Pérez, 2008 .

Non-Autonomous DNA Models

Karl-Heinz Zimmermann, Zoya Ignatova, Israel Martínez-Pérez, 2008 .

Exploiting the features of the finite state automata for biomolecular computing.

Karl-Heinz Zimmermann, Zoya Ignatova, Israel Marck Martínez-Pérez, 2009, Recent patents on DNA & gene sequences.

DNA Computing Models

Karl-Heinz Zimmermann, Zoya Ignatova, Israel Martnez-Prez, 2008 .

Insights into the adaptive response of Arabidopsis thaliana to prolonged thermal stress by ribosomal profiling and RNA-Seq

Zoya Ignatova, Z. Ignatova, Radoslaw Lukoszek, 2016, BMC Plant Biology.

From the test tube to the cell: exploring the folding and aggregation of a beta-clam protein.

Zoya Ignatova, Jiang Hong, Lila M Gierasch, 2007, Biopolymers.

Structure of a hibernating 100S ribosome reveals an inactive conformation of the ribosomal protein S1

Zoya Ignatova, Andreas Czech, Jürgen M Plitzko, 2018, bioRxiv.

Folding at the birth of the nascent chain: coordinating translation with co-translational folding.

Zoya Ignatova, Z. Ignatova, Gong Zhang, 2011, Current opinion in structural biology.

Transient ribosomal attenuation coordinates protein synthesis and co-translational folding

Zoya Ignatova, Z. Ignatova, Gong Zhang, 2009, Nature Structural &Molecular Biology.

Fragments of pro-peptide activate mature penicillin amidase of Alcaligenes faecalis.

Zoya Ignatova, Volker Kasche, Z. Ignatova, 2003, European journal of biochemistry.

Silent mutations in sight: co-variations in tRNA abundance as a key to unravel consequences of silent mutations.

Zoya Ignatova, Andreas Czech, Z. Ignatova, 2010, Molecular bioSystems.

Monitoring protein stability and aggregation in vivo by real-time fluorescent labeling.

Zoya Ignatova, Lila M Gierasch, L. Gierasch, 2004, Proceedings of the National Academy of Sciences of the United States of America.

Extended Polyglutamine Tracts Cause Aggregation and Structural Perturbation of an Adjacent β Barrel Protein*

Zoya Ignatova, Lila M Gierasch, L. Gierasch, 2006, Journal of Biological Chemistry.

In-cell Aggregation of a Polyglutamine-containing Chimera Is a Multistep Process Initiated by the Flanking Sequence*

Zoya Ignatova, Ronald Wetzel, Lila M Gierasch, 2007, Journal of Biological Chemistry.

Assessing polyglutamine conformation in the nucleating event by molecular dynamics simulations.

Markus S Miettinen, Zoya Ignatova, Luca Monticelli, 2012, The journal of physical chemistry. B.

Trade-offs between tRNA abundance and mRNA secondary structure support smoothing of translation elongation rate

Thomas E. Gorochowski, Johannes A. Roubos, Zoya Ignatova, 2015, Nucleic acids research.

Absolute quantification of translational regulation and burden using combined sequencing approaches

Thomas E Gorochowski, Zoya Ignatova, Irina Chelysheva, 2019, Molecular systems biology.

Generic Algorithm to Predict the Speed of Translational Elongation: Implications for Protein Biogenesis

Zoya Ignatova, Z. Ignatova, Gong Zhang, 2009, PloS one.

Interplay between polymerase II‐ and polymerase III‐assisted expression of overlapping genes

Zoya Ignatova, Bernd Mueller-Roeber, B. Mueller‐Roeber, 2013, FEBS letters.

A Minimal Model of Ribosome Allocation Dynamics Captures Trade-offs in Expression between Endogenous and Synthetic Genes.

Thomas E Gorochowski, Zoya Ignatova, Johannes A Roubos, 2016, ACS synthetic biology.

Unusual signal peptide directs penicillin amidase from Escherichia coli to the Tat translocation machinery.

Zoya Ignatova, Volker Kasche, Z. Ignatova, 2002, Biochemical and biophysical research communications.

Optimization of Translation Profiles Enhances Protein Expression and Solubility

Zoya Ignatova, Z. Ignatova, Paul Saffert, 2015, PloS one.

Global and local depletion of ternary complex limits translational elongation

Angelo Valleriani, Zoya Ignatova, A. Valleriani, 2010, Nucleic acids research.