John D Aach

发表

Long-range polony haplotyping of individual human chromosome molecules

Jay Shendure, George M Church, Robi D Mitra, 2006, Nature Genetics.

RNA-Guided Human Genome Engineering via Cas9

James E. DiCarlo, G. Church, J. Aach, 2013, Science.

Genome engineering in Saccharomyces cerevisiae using CRISPR-Cas systems

George M. Church, Prashant Mali, James E. DiCarlo, 2013, Nucleic acids research.

Optimization of scarless human stem cell genome editing

George Church, Prashant Mali, John Aach, 2013, Nucleic acids research.

Barcoding cells using cell-surface programmable DNA-binding domains

G. Church, P. Mali, D. Levner, 2013, Nature Methods.

Supplementary Materials for Genome-wide inactivation of porcine endogenous retroviruses ( PERVs )

G. Church, J. Aach, Luhan Yang, 2015 .

Automated modelling of signal transduction networks

Martin Steffen, George M. Church, Patrik D'haeseleer, 2002, BMC Bioinformatics.

Measuring absolute expression with microarrays with a calibrated reference sample and an extended signal intensity range

John Aach, George M Church, G. Church, 2002, Proceedings of the National Academy of Sciences of the United States of America.

Highly-efficient Cas9-mediated transcriptional programming

Ron Weiss, Samira Kiani, James J. Collins, 2014, Nature Methods.

Quantitative Morphological Signatures Define Local Signaling Networks Regulating Cell Morphology

C. Bakal, N. Perrimon, G. Church, 2007, Science.

Minimum information about a microarray experiment (MIAME)—toward standards for microarray data

Jason E. Stewart, Irene F. Kim, F. Holstege, 2001, Nature Genetics.

Highly Multiplexed Subcellular RNA Sequencing in Situ

George M. Church, Samuel A. Inverso, Prashant Mali, 2014, Science.

Genome-Wide Identification of Human RNA Editing Sites by Parallel DNA Capturing and Sequencing

G. Church, E. Leproust, J. Aach, 2009, Science.

Digital RNA Allelotyping Reveals Tissue-specific and Allele-specific Gene Expression in Human

Jehyuk Lee, G. Church, K. Eggan, 2009, Nature Methods.

CAS9 transcriptional activators for target specificity screening and paired nickases for cooperative genome engineering

G. Church, S. Kosuri, J. Aach, 2013, Nature Biotechnology.

Multiplex and homologous recombination–mediated genome editing in Arabidopsis and Nicotiana benthamiana using guide RNA and Cas9

George M. Church, John Aach, Julie E. Norville, 2013, Nature Biotechnology.

Fluorescent in situ sequencing (FISSEQ) of RNA for gene expression profiling in intact cells and tissues

Kun Zhang, John Aach, George M Church, 2015, Nature Protocols.

Barcoded oligonucleotides ligated on RNA amplified for multiplex and parallel in-situ analyses

Conor K. Camplisson, Thomas C. Ferrante, G. Church, 2018, bioRxiv.

Identification of molecular markers of bipolar cells in the murine retina

John Aach, Sarah E Ross, Michael E Greenberg, 2008, The Journal of comparative neurology.

Multiplex single-molecule interaction profiling of DNA-barcoded proteins

Marc Vidal, George M. Church, John Aach, 2014, Nature.

Characterizing the portability of RecT-mediated oligonucleotide recombination

Christopher J. Gregg, Gabriel T. Filsinger, G. Church, 2020, bioRxiv.

Rational optimization of tolC as a powerful dual selectable marker for genome engineering

Farren J. Isaacs, Christopher J. Gregg, Daniel B. Goodman, 2014, Nucleic acids research.

Supplementary Materials for RNA-Guided Human Genome Engineering via Cas 9

James E. DiCarlo, G. Church, J. Aach, 2012 .

Optimizing complex phenotypes through model-guided multiplex genome engineering

Daniel B. Goodman, Gabriel T. Filsinger, G. Church, 2016, Genome Biology.

Characterizing the portability of phage-encoded homologous recombination proteins

Christopher J. Gregg, Gabriel T. Filsinger, G. Church, 2020, Nature Chemical Biology.

Toward D-peptide biosynthesis: Elongation Factor P enables ribosomal incorporation of consecutive D-amino acids

G. Church, J. Aach, S. Trauger, 2017, bioRxiv.

Improved Cell-Free RNA and Protein Synthesis System

George M. Church, John Aach, Jun Li, 2014, PloS one.

Barcoded oligonucleotides ligated on RNA amplified for multiplexed and parallel in situ analyses

Andrew C. Pawlowski, Conor K. Camplisson, Thomas C. Ferrante, 2021, Nucleic acids research.

Iterative transcription factor screening enables rapid generation of microglia-like cells from human iPSC

Yuqi Tan, G. Church, S. Raychaudhuri, 2022, bioRxiv.

Genome-wide inactivation of porcine endogenous retroviruses (PERVs)

J. Aach, Luhan Yang, Haydy George, 2015, Science.

Targeted and genome-wide sequencing reveal single nucleotide variations impacting specificity of Cas9 in human stem cells

Gang Wang, George Church, Jonathan Seidman, 2014, Nature Communications.

Multi-kilobase homozygous targeted gene replacement in human induced pluripotent stem cells

G. Church, J. Aach, P. Mali, 2014, Nucleic acids research.

Genome Editing With Targeted Deaminases

Adrian W. Briggs, Daniel B. Goodman, G. Church, 2016, bioRxiv.

Personal genomes in progress: from the Human Genome Project to the Personal Genome Project

Misha Angrist, John Aach, J. Aach, 2010, Dialogues in clinical neuroscience.

Addressing the ethical issues raised by synthetic human entities with embryo-like features

G. Church, J. Aach, J. Lunshof, 2017, eLife.

Computational and experimental identification of C. elegans microRNAs.

G. Church, B. Reinhart, G. Ruvkun, 2003, Molecular cell.

Aligning gene expression time series with time warping algorithms

George M. Church, John Aach, G. Church, 2001, Bioinform..