W. Swingley

发表

Robust Estimation of the Phylogenetic Origin of Plastids Using a tRNA-Based Phyloclassifier

Katherine C. H. Amrine, Travis J. Lawrence, D. Ardell, 2018, bioRxiv.

Single-Cell-Genomics-Facilitated Read Binning of Candidate Phylum EM19 Genomes from Geothermal Spring Metagenomes

S. Quake, Jad N. Kanbar, J. Dodsworth, 2015, Applied and Environmental Microbiology.

Genomic Comparison of Two Family-Level Groups of the Uncultivated NAG1 Archaeal Lineage from Chemically and Geographically Disparate Hot Springs

Scott C. Thomas, R. Stepanauskas, J. Dodsworth, 2017, Front. Microbiol..

Genome Sequence of Rhodoferax antarcticus ANT.BRT; A Psychrophilic Purple Nonsulfur Bacterium from an Antarctic Microbial Mat

M. Madigan, J. Touchman, Robert Eugene Blankenship, 2017, Microorganisms.

Characterization of photosystem I antenna proteins in the prasinophyte Ostreococcus tauri.

K. Takizawa, J. Minagawa, W. Swingley, 2010, Biochimica et biophysica acta.

Coordinating Environmental Genomics and Geochemistry Reveals Metabolic Transitions in a Hot Spring Ecosystem

D. Meyer-dombard, E. Shock, J. Raymond, 2012, PloS one.

Heterologous complementation systems verify the mosaic distribution of three distinct protoporphyrinogen IX oxidase in the cyanobacterial phylum

A. Murakami, Hisashi Ito, Y. Fujita, 2022, Journal of Plant Research.

Molecular Genetics and Genomic Analysis of Scytonemin Biosynthesis in Nostoc punctiforme ATCC 29133 (cid:1)

J. Meeks, T. Soule, V. Stout, 2007 .

Complete genome of the thermophilic purple sulfur Bacterium Thermochromatium tepidum compared to Allochromatium vinosum and other Chromatiaceae

M. Madigan, J. Touchman, Robert Eugene Blankenship, 2021, Photosynthesis Research.

A genomic catalog of Earth’s microbiomes

Vincent J. Denef, Natalia N. Ivanova, Paramvir S. Dehal, 2020, Nature Biotechnology.

Soil microbial community composition in tallgrass prairie restorations converge with remnants across a 27‐year chronosequence

N. Barber, W. Swingley, Karley M. Chantos‐Davidson, 2017, Environmental microbiology.

Niche adaptation and genome expansion in the chlorophyll d-producing cyanobacterium Acaryochloris marina

Lawrence E. Page, M. Mimuro, Yuichiro Shimada, 2008, Proceedings of the National Academy of Sciences.

Phototroph genomics ten years on

J. Raymond, W. Swingley, 2008, Photosynthesis Research.

Evolutionary Relationships Among Purple Photosynthetic Bacteria and the Origin of Proteobacterial Photosynthetic Systems

Robert Eugene Blankenship, J. Raymond, W. Swingley, 2009 .

Single-cell and metagenomic analyses indicate a fermentative and saccharolytic lifestyle for members of the OP9 lineage

Christian A. Ross, S. Tringe, S. Quake, 2013, Nature Communications.

The Complete Genome Sequence of Roseobacter denitrificans Reveals a Mixotrophic Rather than Photosynthetic Metabolism

Maeve O’Huallachain, J. Touchman, S. D. Mastrian, 2006, Journal of bacteriology.

Molecular Genetics and Genomic Analysis of Scytonemin Biosynthesis in Nostoc punctiforme ATCC 29133

J. Meeks, T. Soule, V. Stout, 2007, Journal of bacteriology.

Metabolic flexibility revealed in the genome of the cyst-forming α-1 proteobacterium Rhodospirillum centenum

Paul Stothard, Jeffrey W Touchman, Yih-Kuang Lu, 2010, BMC Genomics.

Integrating Markov clustering and molecular phylogenetics to reconstruct the cyanobacterial species tree from conserved protein families.

Jason Raymond, Robert Eugene Blankenship, J. Raymond, 2008, Molecular biology and evolution.

Hydrothermal ecotones and streamer biofilm communities in the Lower Geyser Basin, Yellowstone National Park.

D. Meyer-dombard, E. Shock, J. Raymond, 2011, Environmental microbiology.

The Genome of Heliobacterium modesticaldum, a Phototrophic Representative of the Firmicutes Containing the Simplest Photosynthetic Apparatus � †

Lawrence E. Page, M. Madigan, J. Touchman, 2022 .

Discovery of Chlorophyll d: Isolation and Characterization of a Far-Red Cyanobacterium from the Original Site of Manning and Strain (1943) at Moss Beach, California

Jared T. Broddrick, N. Kiang, Robert Eugene Blankenship, 2022, Microorganisms.

tRNA functional signatures classify plastids as late-branching cyanobacteria

Katherine C. H. Amrine, Travis J. Lawrence, D. Ardell, 2019, BMC Evolutionary Biology.

Correction: The First Complete Plastid Genome from Joinvilleaceae (J. ascendens; Poales) Shows Unique and Unpredicted Rearrangements

W. P. Wysocki, M. Duvall, W. Swingley, 2016, PloS one.

The First Complete Plastid Genome from Joinvilleaceae (J. ascendens; Poales) Shows Unique and Unpredicted Rearrangements

W. P. Wysocki, M. Duvall, W. Swingley, 2016, PloS one.

tRNA Signatures Reveal a Polyphyletic Origin of SAR11 Strains among Alphaproteobacteria

Wesley D. Swingley, David H. Ardell, Katherine C. H. Amrine, 2013, PLoS Comput. Biol..

Enabling Progress Towards Life Detection on NASA Missions

Everett Shock, Taylor Plattner, Ashley Hanna, 2021 .

Microbial Community in Hyperalkaline Steel Slag-Fill Emulates Serpentinizing Springs

Eric D. Becraft, W. Swingley, J. Ohlsson, 2019, Diversity.

Complete genome of the thermophilic purple sulfur Bacterium Thermochromatium tepidum compared to Allochromatium vinosum and other Chromatiaceae

M. Madigan, J. Touchman, Robert Eugene Blankenship, 2021, Photosynthesis Research.

Single-Cell-Genomics-Facilitated Read Binning of Candidate Phylum EM19 Genomes from Geothermal Spring Metagenomes

S. Quake, J. Dodsworth, B. Hedlund, 2015, Applied and Environmental Microbiology.

The Genome of Heliobacterium modesticaldum, a Phototrophic Representative of the Firmicutes Containing the Simplest Photosynthetic Apparatus

Lawrence E. Page, M. Madigan, J. Touchman, 2008, Journal of bacteriology.

Properties and Evolutionary Implications of the Heliobacterial Genome

M. Rodnina, W. Sattley, W. Swingley, 2013 .

Effect of Iron on Growth and Ultrastructure of Acaryochloris marina

Robert Eugene Blankenship, M. Hohmann-Marriott, W. Swingley, 2005, Applied and Environmental Microbiology.