Jean Yee Hwa Yang

发表

Latin square dataset for evaluating the accuracy of mass spectrometry-based protein identification and quantification

Jean Yee Hwa Yang, Susan R. Wilson, Ling Zhong, 2013, 2013 IEEE International Conference on Bioinformatics and Biomedicine.

Jean Yee Hwa Yang, Andy Y. T. Wang, Taiyun Kim, 2018, Briefings Bioinform..

Inferring data-specific micro-RNA function through the joint ranking of micro-RNA and pathways from matched micro-RNA and gene expression data

Jean Yee Hwa Yang, Ellis Patrick, David M. Lin, 2015, Bioinform..

Positive-unlabeled ensemble learning for kinase substrate prediction from dynamic phosphoproteomics data

Jean Yee Hwa Yang, David E. James, Pengyi Yang, 2015, Bioinform..

Improving X!Tandem on Peptide Identification from Mass Spectrometry by Self-Boosted Percolator

Jie Ma, Jean Yee Hwa Yang, Yunping Zhu, 2012, IEEE/ACM Transactions on Computational Biology and Bioinformatics.

A multi-array multi-SNP genotyping algorithm for Affymetrix SNP microarrays

Jean Yee Hwa Yang, Mark R. Segal, Ru-Fang Yeh, 2007, Bioinform..

Autoencoder-based cluster ensembles for single-cell RNA-seq data analysis

Jean Yee Hwa Yang, Dacheng Tao, James G. Burchfield, 2019, BMC Bioinformatics.

Network-based biomarkers enhance classical approaches to prognostic gene expression signatures

Jean Yee Hwa Yang, Rebecca L. Barter, Sarah-Jane Schramm, 2014, BMC Systems Biology.

OCAP: an open comprehensive analysis pipeline for iTRAQ

Jean Yee Hwa Yang, Penghao Wang, Pengyi Yang, 2012, Bioinform..

BIOINFORMATICS ORIGINAL PAPER

Jean Yee Hwa Yang, Penghao Wang, Pengyi Yang, 2022 .

Direction pathway analysis of large-scale proteomics data reveals novel features of the insulin action pathway

Jean Yee Hwa Yang, Ellis Patrick, Christopher Gribben, 2014, Bioinform..

Estimation of data-specific constitutive exons with RNA-Seq data

Jean Yee Hwa Yang, Ellis Patrick, Michael J. Buckley, 2013, BMC Bioinformatics.

QCMAP: An Interactive Web‐Tool for Performance Diagnosis and Prediction of LC‐MS Systems

Jean Yee Hwa Yang, Taiyun Kim, Sean J Humphrey, 2019, Proteomics.

Integrated single cell data analysis reveals cell specific networks and novel coactivation markers

Shila Ghazanfar, John T. Ormerod, Jean Yee Hwa Yang, 2016, BMC Systems Biology.

Analysis of a Splice Array Experiment Elucidates Roles of Chromatin Elongation Factor Spt4–5 in Splicing

Jean Yee Hwa Yang, Mark R. Segal, Yuanyuan Xiao, 2005, PLoS Comput. Biol..

scClassify: hierarchical classification of cells

Jean Yee Hwa Yang, Pengyi Yang, Agus Salim, 2019 .

Gene-gene interaction filtering with ensemble of filters

Jean Yee Hwa Yang, Bing Bing Zhou, Pengyi Yang, 2011, BMC Bioinformatics.

Comparison study of microarray meta-analysis methods

Jean Yee Hwa Yang, Anna Campain, J. Yang, 2010, BMC Bioinformatics.

Gene expression Identifying differentially expressed genes from microarray experiments via statistic synthesis

Jean Yee Hwa Yang, Mark R. Segal, Yuanyuan Xiao, 2005 .

Characterizing mutation-expression network relationships in multiple cancers

Shila Ghazanfar, Jean Yee Hwa Yang, J. Yang, 2015, Comput. Biol. Chem..

Experience on the application of a ground source heat pump system in an archives building

Jean Yee Hwa Yang, XiaoQiang Zhai, X. Zhai, 2011 .

Microarrays--planning your experiment.

Jean Yee Hwa Yang, J. Yang, 2008, Methods in molecular medicine.

Improved moderation for gene-wise variance estimation in RNA-Seq via the exploitation of external information

Jean Yee Hwa Yang, Ellis Patrick, David M. Lin, 2013, BMC Genomics.

Integrative analysis identifies co‐dependent gene expression regulation of BRG1 and CHD7 at distal regulatory sites in embryonic stem cells

Jean Yee Hwa Yang, Taiyun Kim, Pengyi Yang, 2017, Bioinform..

ClassifyR: an R package for performance assessment of classification with applications to transcriptomics

Dario Strbenac, John T. Ormerod, Jean Yee Hwa Yang, 2015, Bioinform..

CiteFuse enables multi-modal analysis of CITE-seq data

Jean Yee Hwa Yang, Hani Jieun Kim, Pengyi Yang, 2019, bioRxiv.

bcGST - an interactive bias-correction method to identify over-represented gene-sets in boutique arrays

Jean Yee Hwa Yang, Matthew Wongchenko, Yibing Yan, 2017, bioRxiv.

Two-Step Cross-Entropy Feature Selection for Microarrays—Power Through Complementarity

Jean Yee Hwa Yang, David Ma, David W. Bulger, 2011, IEEE/ACM Transactions on Computational Biology and Bioinformatics.

Cancer microarray feature selection using support vector machines: comparing regularization techniques

Jean Yee Hwa Yang, Tim Peters, David Bulger, 2009 .

Knowledge-Based Analysis for Detecting Key Signaling Events from Time-Series Phosphoproteomics Data

Jean Yee Hwa Yang, Xiaofeng Zheng, Pengyi Yang, 2015, PLoS Comput. Biol..

Diagonal Discriminant Analysis With Feature Selection for High-Dimensional Data

Jean Yee Hwa Yang, Sarah Elizabeth Romanes, John Thomas Ormerod, 2018, ArXiv.

Estimation of False Discovery Rate of Protein Identification

Jean Yee Hwa Yang, Penghao Wang, Pengyi Yang, 2012 .

Analysis of CDNA Microarray Images

Jean Yee Hwa Yang, Terence P. Speed, Michael J. Buckley, 2001, Briefings Bioinform..