Petros Koumoutsakos

发表

Wavelet‐adaptive solvers on multi‐core architectures for the simulation of complex systems

Diego Rossinelli, Babak Hejazialhosseini, Michael Bergdorf, 2011, Concurr. Comput. Pract. Exp..

The secret life of vortices

Petros Koumoutsakos, 2008, SIGGRAPH '08.

Hierarchical Stochastic Model in Bayesian Inference: Theoretical Implications and Efficient Approximation

Panagiotis Angelikopoulos, Petros Koumoutsakos, James L. Beck, 2016 .

Detection of arterial wall abnormalities via Bayesian model selection

Costas Papadimitriou, Petros Koumoutsakos, Karen Larson, 2019, Royal Society Open Science.

FAST QUADRATIC LOCAL META-MODELS FOR EVOLUTIONARY OPTIMIZATION OF ANGUILLIFORM SWIMMERS

Petros Koumoutsakos, Nikolaus Hansen, Stefan Kern, 2004 .

Evolution strategies for film cooling optimization

Petros Koumoutsakos, Sibylle D. Müller, Jens Honore Walther, 2001 .

High order finite volume methods on wavelet-adapted grids with local time-stepping on multicore architectures for the simulation of shock-bubble interactions

Diego Rossinelli, Babak Hejazialhosseini, Michael Bergdorf, 2010, J. Comput. Phys..

Bending models of lipid bilayer membranes: spontaneous curvature and area-difference elasticity pdf

Petros Koumoutsakos, Xin Bian, Sergey Litvinov, 2019, Computer Methods in Applied Mechanics and Engineering.

Multilevel Adaptive Particle Methods for Convection-Diffusion Equations

Michael Bergdorf, Petros Koumoutsakos, Georges-Henri Cottet, 2005, Multiscale Model. Simul..

From 11 to 14.4 PFLOPs: Performance Optimization for Finite Volume Flow Solver

Diego Rossinelli, Babak Hejazialhosseini, Petros Koumoutsakos, 2015 .

Pareto Optimal Swimmers

Diego Rossinelli, Petros Koumoutsakos, Panagiotis E. Hadjidoukas, 2017, PASC.

Optimization of Aircraft Wake Alleviation Schemes through an Evolution Strategy

Petros Koumoutsakos, Mattia Gazzola, Stefan Kern, 2010, VECPAR.

Large Scale, Multiresolution Flow Simulations Using Remeshed Particle Methods

Michael Bergdorf, Petros Koumoutsakos, Philippe Chatelain, 2008 .

Petascale simulations of compressible flows with interfaces

Petros Koumoutsakos, Panagiotis E. Hadjidoukas, Fabian Wermelinger, 2018, J. Comput. Sci..

Multiscale stochastic simulations of chemical reactions with regulated scale separation

Petros Koumoutsakos, Justin Feigelman, P. Koumoutsakos, 2013, J. Comput. Phys..

Self-organizing Maps for Pareto Optimization of Airfoils

Petros Koumoutsakos, Gianfranco Guidati, Dirk Büche, 2002, PPSN.

Reverse Engineering of Self-Propelled Anguilliform Swimmers

Petros Koumoutsakos, Stefan Kern, Philippe Chatelain, 2008 .

Microchannel Optimization Using Multiobjective Evolution Strategies

Ivo F. Sbalzarini, Petros Koumoutsakos, Sibylle D. Müller, 2001, EMO.

Remember and Forget for Experience Replay pdf

Petros Koumoutsakos, Guido Novati, P. Koumoutsakos, 2018, ICML.

A Fourier-based elliptic solver for vortical flows with periodic and unbounded directions

Petros Koumoutsakos, Philippe Chatelain, 2010, J. Comput. Phys..

Evolution strategies for computational and experimental Fluid Dynamic applications

Ivo F. Sbalzarini, Petros Koumoutsakos, Sibylle D. Müller, 2001 .

An immersed boundary method for smoothed particle hydrodynamics of self-propelled swimmers

Petros Koumoutsakos, Simone Elke Hieber, P. Koumoutsakos, 2008, J. Comput. Phys..

Optimization Algorithms based on a Model of Bacterial Chemotaxis

Petros Koumoutsakos, Sibylle D. Müller, Stefano Airaghi, 2000 .

Supplementary material from "Data-driven forecasting of high-dimensional chaotic systems with long short-term memory networks"

Petros Koumoutsakos, Zhong Yi Wan, Themistoklis P. Sapsis, 2018 .

Bayesian selection for coarse-grained models of liquid water

Petros Koumoutsakos, Julija Zavadlav, Georgios Arampatzis, 2018, Scientific Reports.

Simulations of single and multiple swimmers with non-divergence free deforming geometries

Petros Koumoutsakos, Mattia Gazzola, Philippe Chatelain, 2011, J. Comput. Phys..

A Hybrid Model of Sprouting Angiogenesis

Michael Bergdorf, Petros Koumoutsakos, Florian Milde, 2008, ICCS.

High throughput simulations of two-phase flows on Blue Gene/Q

Jonas Sukys, Diego Rossinelli, Babak Hejazialhosseini, 2015, PARCO.

Mesh–particle interpolations on graphics processing units and multicore central processing units

Diego Rossinelli, Petros Koumoutsakos, Christian Conti, 2011, Philosophical Transactions of the Royal Society A: Mathematical, Physical and Engineering Sciences.

Multiresolution Simulations Using Particles

Michael Bergdorf, Petros Koumoutsakos, 2006, VECPAR.

Preprint: Multi-objective Evolutionary Algorithm for the Optimization of Noisy Combustion Processes

Petros Koumoutsakos, Rolf Dornberger, Dirk Büche, 2002 .

Special Section on Multiscale Modeling in Materials and Life Sciences

Petros Koumoutsakos, Thomas Hou, 2005, Multiscale Model. Simul..

Optimal fidelity multi-level Monte Carlo for quantification of uncertainty in simulations of cloud cavitation collapse pdf

Jonas Sukys, Petros Koumoutsakos, Panagiotis E. Hadjidoukas, 2017, ArXiv.

GPU and APU computations of Finite Time Lyapunov Exponent fields

Diego Rossinelli, Petros Koumoutsakos, Christian Conti, 2012, J. Comput. Phys..

Wavelet-Based Adaptive Solvers on Multi-core Architectures for the Simulation of Complex Systems

Diego Rossinelli, Babak Hejazialhosseini, Michael Bergdorf, 2009, Euro-Par.

A comparison of vortex and pseudo-spectral methods for the simulation of periodic vortical flows at high Reynolds numbers

Petros Koumoutsakos, D. I. Pullin, Wim M. van Rees, 2011, J. Comput. Phys..

Feedback algorithms for turbulence control - Some recent developments

Petros Koumoutsakos, Thomas Bewley, Edward Hammond, 1997 .

Deep-Reinforcement-Learning for Gliding and Perching Bodies pdf

Petros Koumoutsakos, Guido Novati, Lakshminarayanan Mahadevan, 2018, ArXiv.

International Conference on Computational Science, ICCS 2017, 12-14 June 2017, Zurich, Switzerland

Jack Dongarra, Peter M. A. Sloot, Petros Koumoutsakos, 2017, ICCS.

S-Leaping: An Adaptive, Accelerated Stochastic Simulation Algorithm, Bridging $$\tau $$τ-Leaping and R-Leaping

Petros Koumoutsakos, Bjoern H Menze, Bjoern Menze, 2018, Bulletin of mathematical biology.

Adaptive mesh refinement for stochastic reaction-diffusion processes

Petros Koumoutsakos, Philippe Chatelain, Basil Bayati, 2011, J. Comput. Phys..

Synchronisation through learning for two self-propelled swimmers

Diego Rossinelli, Petros Koumoutsakos, Siddhartha Verma, 2015, Bioinspiration & biomimetics.

Self-Adaptation for Multi-objective Evolutionary Algorithms

Petros Koumoutsakos, Sibylle D. Müller, Dirk Büche, 2003, EMO.

(μ,λ)-CCMA-ES for Constrained Optimization with an Application in Pharmacodynamics

Petros Koumoutsakos, Pascal Weber, Georgios Arampatzis, 2019, PASC.

Edge detection in microscopy images using curvelets

Petros Koumoutsakos, Tobias Gebäck, P. Koumoutsakos, 2009, BMC Bioinformatics.

Data driven, predictive molecular dynamics for nanoscale flow simulations under uncertainty.

Costas Papadimitriou, Panagiotis Angelikopoulos, Petros Koumoutsakos, 2013, The journal of physical chemistry. B.

A Mixed Bayesian Optimization Algorithm with Variance Adaptation

Petros Koumoutsakos, Nikolaus Hansen, Stefan Kern, 2004, PPSN.

Massively Parallel Vortex Particle Simulations of Aircraft Wakes

Alessandro Curioni, Diego Rossinelli, Michael Bergdorf, 2008 .

Optimal sensor placement for artificial swimmers

Costas Papadimitriou, Petros Koumoutsakos, Siddhartha Verma, 2019, Journal of Fluid Mechanics.

Large Scale Three-Dimensional Boundary Element Simulation of Subduction

Petros Koumoutsakos, Philippe Chatelain, Gabriele Morra, 2007, International Conference on Computational Science.

The in-silico lab-on-a-chip: petascale and high-throughput simulations of microfluidics at cell resolution

Massimo Bernaschi, Mauro Bisson, Massimiliano Fatica, 2015, SC15: International Conference for High Performance Computing, Networking, Storage and Analysis.

Local Meta-models for Optimization Using Evolution Strategies

Petros Koumoutsakos, Nikolaus Hansen, Stefan Kern, 2006, PPSN.

Reducing the Time Complexity of the Derandomized Evolution Strategy with Covariance Matrix Adaptation (CMA-ES)

Petros Koumoutsakos, Nikolaus Hansen, Sibylle D. Müller, 2003, Evolutionary Computation.

Optimization based on bacterial chemotaxis

Petros Koumoutsakos, Sibylle D. Müller, Stefano Airaghi, 2002, IEEE Trans. Evol. Comput..

Vortex Methods for Massively Parallel Computer Architectures

Alessandro Curioni, Diego Rossinelli, Michael Bergdorf, 2008, VECPAR.

Increasing the Serial and the Parallel Performance of the CMA-Evolution Strategy with Large Populations

Petros Koumoutsakos, Nikolaus Hansen, Sibylle D. Müller, 2002, PPSN.

Fully Context-Aware Video Prediction pdf

Petros Koumoutsakos, Rupesh Kumar Srivastava, Qin Wang, 2017, ArXiv.

Multi-objective optimization of artificial swimmers

Petros Koumoutsakos, Panagiotis E. Hadjidoukas, Siddhartha Verma, 2017, 2017 IEEE Congress on Evolutionary Computation (CEC).

Particle methods for incompressible flow simulations

Petros Koumoutsakos, Jens Honore Walther, P. Koumoutsakos, 1999 .

Feasibility of using Hybrid Wavelet Collocation - Brinkman Penalization Method for Shape and Topology Optimization

Petros Koumoutsakos, Mattia Gazzola, Oleg V. Vasilyev, 2009 .

Video: The In-Silico Lab-on-a-Chip - Catching a Needle in a Flowing Haystack

Diego Rossinelli, Petros Koumoutsakos, Panagiotis E. Hadjidoukas, 2015 .

Forecasting of Spatio-temporal Chaotic Dynamics with Recurrent Neural Networks: a comparative study of Reservoir Computing and Backpropagation Algorithms pdf

Michelle Girvan, Petros Koumoutsakos, Jaideep Pathak, 2019, ArXiv.

Personalized Radiotherapy Planning for Glioma Using Multimodal Bayesian Model Calibration pdf

Panagiotis Angelikopoulos, Koenraad Van Leemput, Petros Koumoutsakos, 2018, ArXiv.

theta-SHAKE: An extension to SHAKE for the explicit treatment of angular constraints

Petros Koumoutsakos, Pedro Gonnet, Jens H. Walther, 2009, Comput. Phys. Commun..

Fluids and Supercomputers: The Billion Particle Era

Petros Koumoutsakos, P. Koumoutsakos, 2008, ERCIM News.

An Efficient Compressible Multicomponent Flow Solver for Heterogeneous CPU/GPU Architectures

Diego Rossinelli, Babak Hejazialhosseini, Petros Koumoutsakos, 2016, PASC.

High performance CPU/GPU multiresolution Poisson solver

Diego Rossinelli, Petros Koumoutsakos, Panagiotis E. Hadjidoukas, 2013, PARCO.

Flow Optimization Using Stochastic Algorithms

Petros Koumoutsakos, Sibylle D. Müller, P. Koumoutsakos, 2006 .

Modeling, Simulation and Optimization of Anguilliform Swimmers

Petros Koumoutsakos, Stefan Kern, Philippe Chatelain, 2008 .

Biologically inspired algorithms for flow optimization

Michele Milano, Petros Koumoutsakos, Sibylle D. Müller, 1999 .

Flow simulations using particles: bridging computer graphics and CFD

Diego Rossinelli, Petros Koumoutsakos, Georges-Henri Cottet, 2008, SIGGRAPH '08.

Langevin Diffusion for Population Based Sampling with an Application in Bayesian Inference for Pharmacodynamics

Panagiotis Angelikopoulos, Petros Koumoutsakos, Stephen Wu, 2016, SIAM J. Sci. Comput..

Accelerating evolutionary algorithms with Gaussian process fitness function models

Petros Koumoutsakos, Nicol N. Schraudolph, Dirk Büche, 2005, IEEE Transactions on Systems, Man, and Cybernetics, Part C (Applications and Reviews).

D-leaping: Accelerating stochastic simulation algorithms for reactions with delays

Petros Koumoutsakos, Philippe Chatelain, Basil Bayati, 2009, J. Comput. Phys..

When Do Heavy-Tail Distributions Help?

Anne Auger, Petros Koumoutsakos, Nikolaus Hansen, 2006, PPSN.

Full Manuscript Backup for Published Paper CEC 2017 (IEEE Congress on Evolutionary Computation)

Petros Koumoutsakos, Panagiotis E. Hadjidoukas, Siddhartha Verma, 2017 .

Vortex Particle Simulations of Aircraft Wake Instabilities on Massively Parallel Architectures

Alessandro Curioni, Diego Rossinelli, Michael Bergdorf, 2008 .

Learning to school in the presence of hydrodynamic interactions

Petros Koumoutsakos, Mattia Gazzola, Dmitry Alexeev, 2015, Journal of Fluid Mechanics.

Nanoscale Fluid Mechanics

Petros Koumoutsakos, Jens Honore Walther, T. Werder, 2004 .

An immersed boundary-lattice-Boltzmann method for the simulation of the flow past an impulsively started cylinder

Petros Koumoutsakos, Philippe Chatelain, Alexandre Dupuis, 2008, J. Comput. Phys..

Bayesian uncertainty quantification and propagation in molecular dynamics simulations: a high performance computing framework.

Costas Papadimitriou, Panagiotis Angelikopoulos, Petros Koumoutsakos, 2012, The Journal of chemical physics.

Simulation of pollutant transport using a particle method

Petros Koumoutsakos, Wolfgang Kinzelbach, Stephanie Zimmermann, 2001 .

A clustering genetic algorithm for actuator optimization in flow control

Michele Milano, Petros Koumoutsakos, 2000, Proceedings. The Second NASA/DoD Workshop on Evolvable Hardware.

HIERARCHICAL BAYESIAN MODELING FOR MOLECULAR DYNAMICS SIMULATIONS USING HETEROGENEOUS DATA

Panagiotis Angelikopoulos, Petros Koumoutsakos, Stephen Wu, 2015 .

Non-periodic Molecular Dynamics simulations of coarse grained lipid bilayer in water

Petros Koumoutsakos, Jens H. Walther, Itsuo Hanasaki, 2010, Comput. Math. Appl..

Learning probability distributions in continuous evolutionary algorithms – a comparative review

Petros Koumoutsakos, Nikolaus Hansen, Stefan Kern, 2004, Natural Computing.

Multiresolution Particle Methods

Michael Bergdorf, Petros Koumoutsakos, P. Koumoutsakos, 2007 .

Large Scale Simulation of Cloud Cavitation Collapse

Petros Koumoutsakos, Fabian Wermelinger, Ursula Rasthofer, 2017, ICCS.

A process for producing a burner system

Petros Koumoutsakos, Bruno Schuermans, Rolf Dornberger, 2001 .

Remeshed smoothed particle hydrodynamics simulation of the mechanical behavior of human organs.

Petros Koumoutsakos, Simone E Hieber, Jens H Walther, 2004, Technology and health care : official journal of the European Society for Engineering and Medicine.

High Performance CPU Kernels for Multiphase Compressible Flows

Diego Rossinelli, Babak Hejazialhosseini, Petros Koumoutsakos, 2012, VECPAR.

Efficient collective swimming by harnessing vortices through deep reinforcement learning

Petros Koumoutsakos, Siddhartha Verma, Guido Novati, 2018, Proceedings of the National Academy of Sciences.

A comparative study of penalization and phase field methods for the solution of the diffusion equation in complex geometries

Petros Koumoutsakos, Gerardo Tauriello, P. Koumoutsakos, 2015, J. Comput. Phys..

Exploiting Task-Based Parallelism in Bayesian Uncertainty Quantification

Costas Papadimitriou, Panagiotis Angelikopoulos, Petros Koumoutsakos, 2015, Euro-Par.

High throughput software for direct numerical simulations of compressible two-phase flows

Diego Rossinelli, Babak Hejazialhosseini, Petros Koumoutsakos, 2012, 2012 International Conference for High Performance Computing, Networking, Storage and Analysis.

Bayesian uncertainty quantification and propagation for discrete element simulations of granular materials

Costas Papadimitriou, Panagiotis Angelikopoulos, Diego Rossinelli, 2014 .

Wavelet-based Multiresolution Particle Methods

Michael Bergdorf, Petros Koumoutsakos, P. Koumoutsakos, 2006 .

Algorithms for shear flow control and optimization

Parviz Moin, Petros Koumoutsakos, P. Koumoutsakos, 1999, Proceedings of the 38th IEEE Conference on Decision and Control (Cat. No.99CH36304).

Machine Learning for Biological Trajectory Classification Applications

Ivo F. Sbalzarini, Petros Koumoutsakos, Julie Theriot, 2002 .

Multi-core/GPU accelerated multi-resolution simulations of compressible flows

Diego Rossinelli, Babak Hejazialhosseini, Petros Koumoutsakos, 2010 .

LES of wind turbine wakes and coarse scale aerodynamics using a Vortex Particle-Mesh method

Petros Koumoutsakos, Grégoire Winckelmans, Philippe Chatelain, 2011 .

Detection of arterial wall abnormalities via Bayesian model selection

Costas Papadimitriou, Petros Koumoutsakos, Anastasios Matzavinos, 2018, bioRxiv.

A Lagrangian particle method for the simulation of linear and nonlinear elastic models of soft tissue

Petros Koumoutsakos, Simone Elke Hieber, P. Koumoutsakos, 2008, J. Comput. Phys..

Coupling Remeshed Particle and Phase Field Methods for the Simulation of Reaction-Diffusion on the Surface and the Interior of Deforming Geometries

Petros Koumoutsakos, Gerardo Tauriello, P. Koumoutsakos, 2013, SIAM J. Sci. Comput..

Multiscale simulation of water flow past a C540 fullerene

Matej Praprotnik, Petros Koumoutsakos, Jens H. Walther, 2012, J. Comput. Phys..

Application of machine learning algorithms to flow modeling and optimization

Michele Milano, Petros Koumoutsakos, Sibylle D. Müller, 1999 .

Hierarchical Stochastic Model in Bayesian Inference for Engineering Applications: Theoretical Implications and Efficient Approximation

Panagiotis Angelikopoulos, Petros Koumoutsakos, James L. Beck, 2018, ASCE-ASME J Risk and Uncert in Engrg Sys Part B Mech Engrg.

Multilevel Control Variates for Uncertainty Quantification in Simulations of Cloud Cavitation

Jonas Sukys, Petros Koumoutsakos, Panagiotis E. Hadjidoukas, 2018, SIAM J. Sci. Comput..

Synchronisation through learning for two self-propelled swimmers

Diego Rossinelli, Petros Koumoutsakos, Siddhartha Verma, 2015, Bioinspiration & biomimetics.

A Method for Handling Uncertainty in Evolutionary Optimization With an Application to Feedback Control of Combustion

Petros Koumoutsakos, Nikolaus Hansen, Lino Guzzella, 2009, IEEE Transactions on Evolutionary Computation.

Active Learning with Adaptive Grids

Jürgen Schmidhuber, Michele Milano, Petros Koumoutsakos, 2001, ICANN.

Learning Probability Distributions in Continuous Evolutionary Algorithms - a Comparative Review

Petros Koumoutsakos, Nikolaus Hansen, Stefan Kern, 2004, Nat. Comput..

Towards the Virtual Rheometer: High Performance Computing for the Red Blood Cell Microstructure

Diego Rossinelli, Petros Koumoutsakos, Panagiotis E. Hadjidoukas, 2017, PASC.

ContextVP: Fully Context-Aware Video Prediction

Petros Koumoutsakos, Qin Wang, Rupesh Kumar Srivastava, 2017, ECCV.

High performance CPU/GPU Poisson solver

Diego Rossinelli, Petros Koumoutsakos, Panagiotis E. Hadjidoukas, 2014 .

Evolving strategies for active flow control

Jürgen Schmidhuber, Michele Milano, Petros Koumoutsakos, 2000, Proceedings of the 2000 Congress on Evolutionary Computation. CEC00 (Cat. No.00TH8512).

Machine Learning for Fluid Mechanics pdf

Petros Koumoutsakos, B. R. Noack, Steven Brunton, 2019, Annual Review of Fluid Mechanics.

Π4U: A high performance computing framework for Bayesian uncertainty quantification of complex models

Costas Papadimitriou, Panagiotis Angelikopoulos, Petros Koumoutsakos, 2015, J. Comput. Phys..

11 PFLOP/s simulations of cloud cavitation collapse

Nikolaus A. Adams, Constantine Bekas, Alessandro Curioni, 2013, 2013 SC - International Conference for High Performance Computing, Networking, Storage and Analysis (SC).

Evolutionary Optimization of Feedback Controllers for Thermoacoustic Instabilities

Petros Koumoutsakos, Nikolaus Hansen, Lino Guzzella, 2008 .

A High Performance Computing Framework for Multiphase, Turbulent Flows on Structured Grids

Petros Koumoutsakos, Michail Chatzimanolakis, Fabian Wermelinger, 2019, PASC.

A Software Framework for the Portable Parallelization of Particle-Mesh Simulations

Ivo F. Sbalzarini, Michael Bergdorf, Petros Koumoutsakos, 2006, Euro-Par.

Self-Organizing Maps for Multi-Objective Optimization

Michele Milano, Petros Koumoutsakos, Dirk Büche, 2002 .

Efficient techniques for Bayesian inverse modeling of large-order computational models

Costas Papadimitriou, Panagiotis Angelikopoulos, Petros Koumoutsakos, 2014 .

Multicore/Multi-GPU Accelerated Simulations of Multiphase Compressible Flows Using Wavelet Adapted Grids

Diego Rossinelli, Babak Hejazialhosseini, Petros Koumoutsakos, 2011, SIAM J. Sci. Comput..

Self-organizing nets for optimization

Jürgen Schmidhuber, Michele Milano, Petros Koumoutsakos, 2004, IEEE Transactions on Neural Networks.

Approximate Bayesian Computation for Granular and Molecular Dynamics Simulations

Costas Papadimitriou, Panagiotis Angelikopoulos, Petros Koumoutsakos, 2016, PASC.

Vortex methods for incompressible flow simulations on the GPU

Diego Rossinelli, Petros Koumoutsakos, 2008, The Visual Computer.

Bayesian identification of the tendon fascicle’s structural composition using finite element models for helical geometries

Costas Papadimitriou, Panagiotis Angelikopoulos, Petros Koumoutsakos, 2017 .

Optimal shapes for self-propelled swimmers

Petros Koumoutsakos, Mattia Gazzola, Wim M. van Rees, 2011 .

Evolution Strategies for Automatic Optimization of Jet Mixing

Petros Koumoutsakos, David E. Parekh, Jonathan B. Freund, 2001 .

A Lagrangian Particle-Wavelet Method

Michael Bergdorf, Petros Koumoutsakos, P. Koumoutsakos, 2006, Multiscale Model. Simul..

Data-assisted reduced-order modeling of extreme events in complex dynamical systems

Petros Koumoutsakos, Zhong Yi Wan, Themistoklis Sapsis, 2018, PloS one.

Flow Simulations Using Particles

Petros Koumoutsakos, Philippe Chatelain, Georges-Henri Cottet, 2009, SIGGRAPH 2009.

A stochastic boundary forcing for dissipative particle dynamics

Petros Koumoutsakos, Adrian M. Altenhoff, Jens H. Walther, 2007, J. Comput. Phys..

A Stochastic Model for Microtubule Motors Describes the In Vivo Cytoplasmic Transport of Human Adenovirus

Petros Koumoutsakos, Mattia Gazzola, Basil Bayati, 2009, PLoS Comput. Biol..

PPM - A highly efficient parallel particle-mesh library for the simulation of continuum systems

Ivo F. Sbalzarini, Michael Bergdorf, Petros Koumoutsakos, 2006, J. Comput. Phys..

Fusing heterogeneous data for the calibration of molecular dynamics force fields using hierarchical Bayesian models.

Costas Papadimitriou, Panagiotis Angelikopoulos, Petros Koumoutsakos, 2016, The Journal of chemical physics.

GPU accelerated simulations of bluff body flows using vortex particle methods

Diego Rossinelli, Michael Bergdorf, Petros Koumoutsakos, 2010, J. Comput. Phys..

Reverse Engineering of Anguilliform Swimmers and Bio-inspired Flow Control

Petros Koumoutsakos, Stefan Kern, Philippe Chatelain, 2009 .

High Order Semi-Lagrangian Particle Methods

Petros Koumoutsakos, Georges-Henri Cottet, P. Koumoutsakos, 2017 .

MRAG-I2D: Multi-resolution adapted grids for remeshed vortex methods on multicore architectures

Diego Rossinelli, Babak Hejazialhosseini, Michael Bergdorf, 2015, J. Comput. Phys..

Vortex Methods: Theory and Practice

Petros Koumoutsakos, Georges-Henri Cottet, P. Koumoutsakos, 2000 .

The Art of Computational Science, Bridging Gaps - Forming Alloys. Preface for ICCS 2017

Peter M. A. Sloot, Michael Lees, Jack J. Dongarra, 2018, ICCS.

Fast Motion of Heaving Airfoils

Petros Koumoutsakos, Siddhartha Verma, Guido Novati, 2017, ICCS.

Bubbles in Turbulent Flows: Data-driven, kinematic models with memory terms

Petros Koumoutsakos, Zhong Yi Wan, Themistoklis P. Sapsis, 2019 .

The Art of Computational Science, Bridging Gaps - Forming Alloys. Preface for ICCS 2017

Peter M. A. Sloot, Michael Lees, Jack J. Dongarra, 2017, ICCS.

R-leaping: accelerating the stochastic simulation algorithm by reaction leaps.

Anne Auger, Petros Koumoutsakos, Philippe Chatelain, 2006, The Journal of chemical physics.

Neural network modeling for near wall turbulent flow

Michele Milano, Petros Koumoutsakos, P. Koumoutsakos, 2002 .

Data-driven forecasting of high-dimensional chaotic systems with long short-term memory networks

Petros Koumoutsakos, Themistoklis P. Sapsis, Pantelis R. Vlachas, 2018, Proceedings of the Royal Society A: Mathematical, Physical and Engineering Sciences.

Fast Particle Methods for Multiscale Phenomena Simulations

Petros Koumoutsakos, Andrew Pohorille, A. Wray, 2000 .

A Control Algorithm for Multiscale Simulations of Liquid Water

Petros Koumoutsakos, Evangelos M. Kotsalis, 2008, ICCS.

Korali: Efficient and scalable software framework for Bayesian uncertainty quantification and stochastic optimization

Petros Koumoutsakos, Georgios Arampatzis, Daniel Wälchli, 2020, Computer Methods in Applied Mechanics and Engineering.

Data-driven prediction and origin identification of epidemics in population networks

Costas Papadimitriou, Petros Koumoutsakos, Georgios Arampatzis, 2017, Royal Society Open Science.

Learning efficient navigation in vortical flow fields

Petros Koumoutsakos, John O. Dabiri, Guido Novati, 2021, Nature Communications.

Automating turbulence modelling by multi-agent reinforcement learning

Petros Koumoutsakos, Guido Novati, Hugues Lascombes de Laroussilhe, 2021, Nature Machine Intelligence.

Learning swimming escape patterns under energy constraints pdf

Petros Koumoutsakos, Guido Novati, Pascal Weber, 2021, ArXiv.

Learning swimming escape patterns for larval fish under energy constraints

Petros Koumoutsakos, Guido Novati, Pascal Weber, 2021, Physical Review Fluids.

Scientific multi-agent reinforcement learning for wall-models of turbulent flows pdf

Petros Koumoutsakos, H. Jane Bae, P. Koumoutsakos, 2021, Nature Communications.

Editorial: Machine Learning and Physical Review Fluids : An Editorial Perspective

Petros Koumoutsakos, Michael P. Brenner, P. Koumoutsakos, 2021, Physical Review Fluids.

Computing foaming flows across scales: From breaking waves to microfluidics pdf

Petros Koumoutsakos, Sergey Litvinov, Petr Karnakov, 2021, Science advances.

Publisher Correction: Automating turbulence modelling by multi-agent reinforcement learning

Petros Koumoutsakos, Guido Novati, Hugues Lascombes de Laroussilhe, 2021, Nat. Mach. Intell..

Publisher Correction: Automating turbulence modelling by multi-agent reinforcement learning

Petros Koumoutsakos, Guido Novati, Hugues Lascombes de Laroussilhe, 2021, Nat. Mach. Intell..

Robotics in the AI era: A vision for a Hellenic Robotics Initiative

John Lygeros, George J. Pappas, Petros Koumoutsakos, 2021, Found. Trends Robotics.

Accelerated stochastic and hybrid methods for spatial simulations of reaction–diffusion systems

Diego Rossinelli, Petros Koumoutsakos, Basil Bayati, 2008 .

Multiresolution stochastic simulations of reaction-diffusion processes.

Petros Koumoutsakos, Philippe Chatelain, Basil Bayati, 2008, Physical chemistry chemical physics : PCCP.

Improved boundary integral method for inviscid boundary condition applications

Petros Koumoutsakos, Anthony Leonard, P. Koumoutsakos, 1993 .

Particle Mesh Hydrodynamics for Astrophysics Simulations

Petros Koumoutsakos, Philippe Chatelain, Georges-Henri Cottet, 2007 .

On the water-carbon interaction for use in MD simulations of graphite and carbon nanotubes

Petros Koumoutsakos, Jens Honore Walther, T. Werder, 2003 .

A hybrid model for three-dimensional simulations of sprouting angiogenesis.

Michael Bergdorf, Petros Koumoutsakos, Florian Milde, 2008, Biophysical journal.

Evolutionary optimization of an anisotropic compliant surface for turbulent friction drag reduction

Petros Koumoutsakos, Philippe Chatelain, Koji Fukagata, 2008, Proceeding of Fifth International Symposium on Turbulence and Shear Flow Phenomena.

An evolutionary algorithm for multi-objective optimization of combustion processes

Petros Koumoutsakos, Dirk Büche, Peter Stoll, 2002 .

Active control of vortex–wall interactions

Petros Koumoutsakos, 1997 .

TScratch: a novel and simple software tool for automated analysis of monolayer wound healing assays.

Petros Koumoutsakos, Tobias Gebäck, Michael Detmar, 2009, BioTechniques.

Direct Numerical Simulations using Vortex Methods

Petros Koumoutsakos, Anthony Leonard, P. Koumoutsakos, 1993 .

Remeshed smoothed particle hydrodynamics for the simulation of viscous and heat conducting flows

Petros Koumoutsakos, Dimos Poulikakos, P. Koumoutsakos, 2002 .

Simulation of Particulate Flow Using Particle Methods a P3M Algorithm for Charged Particulates

Petros Koumoutsakos, Jens Honore Walther, Stefan Kern, 2003 .

Vortex Methods with Spatially Varying Cores

Petros Koumoutsakos, Georges-Henri Cottet, P. Koumoutsakos, 2000 .

A novel supervised trajectory segmentation algorithm identifies distinct types of human adenovirus motion in host cells.

Petros Koumoutsakos, Jo A. Helmuth, Ivo F Sbalzarini, 2007, Journal of structural biology.

Thermophoretic motion of water nanodroplets confined inside carbon nanotubes.

Ivo F. Sbalzarini, Petros Koumoutsakos, P. Koumoutsakos, 2009, Nano letters.

Bayesian Annealed Sequential Importance Sampling: An Unbiased Version of Transitional Markov Chain Monte Carlo

Costas Papadimitriou, Panagiotis Angelikopoulos, Petros Koumoutsakos, 2018 .

On the Water−Carbon Interaction for Use in Molecular Dynamics Simulations of Graphite and Carbon Nanotubes

Petros Koumoutsakos, Jens Honore Walther, T. Werder, 2003 .

Shape Optimization for Drag Reduction in Linked Bodies using Evolution Strategies and the Hybrid Wavelet Collocation - Brinkman Penalization Method

Petros Koumoutsakos, Mattia Gazzola, Oleg V. Vasilyev, 2010 .

Continuum-particle hybrid methods for dense fluids

Petros Koumoutsakos, Jens Honore Walther, T. Werder, 2004 .

Curvature induced L-defects in water conduction in carbon nanotubes.

Petros Koumoutsakos, Urs Zimmerli, P. Koumoutsakos, 2005, Nano letters.

Three-dimensional vortex methods for particle-laden flows with two-way coupling

Petros Koumoutsakos, Jens Honore Walther, P. Koumoutsakos, 2001 .

Simulations of (an)isotropic diffusion on curved biological surfaces.

Petros Koumoutsakos, Ivo F Sbalzarini, Ari Helenius, 2006, Biophysical journal.

Cell Image Velocimetry (CIV): boosting the automated quantification of cell migration in wound healing assays.

Vartan Kurtcuoglu, Petros Koumoutsakos, Dimos Poulikakos, 2012, Integrative biology : quantitative biosciences from nano to macro.

Effects of organelle shape on fluorescence recovery after photobleaching.

Petros Koumoutsakos, Ivo F Sbalzarini, Ari Helenius, 2005, Biophysical journal.

Effects of Atomistic Domain Size on Hybrid Lattice Boltzmann-Molecular Dynamics Simulations of Dense Fluids

Petros Koumoutsakos, A. Dupuis, P. Koumoutsakos, 2007 .

Flow mediated interactions between two cylinders at finite Re numbers

Petros Koumoutsakos, Mattia Gazzola, Andrew A. Tchieu, 2012 .

Molecular Dynamics Simulation of Nanodroplet Evaporation

Petros Koumoutsakos, Jens Honore Walther, P. Koumoutsakos, 2001 .

115 Optimization of an anisotropic compliant surface for turbulent friction drag reduction(1)

Petros Koumoutsakos, Philippe Chatelain, Koji Fukagata, 2007 .

VORTICITY FLUX CONTROL FOR A TURBULENT CHANNEL FLOW

Petros Koumoutsakos, P. Koumoutsakos, 1999 .

Strain engineering of Kapitza resistance in few-layer graphene.

Petros Koumoutsakos, Jie Chen, P. Koumoutsakos, 2014, Nano letters.

A clustering genetic algorithm for cylinder drag optimization

Michele Milano, Petros Koumoutsakos, P. Koumoutsakos, 2002 .

Carbon nanotubes in water:structural characteristics and energetics

Petros Koumoutsakos, Jens Honore Walther, Richard L. Jaffe, 2001 .

SEM++: A particle model of cellular growth, signaling and migration

Petros Koumoutsakos, Gerardo Tauriello, Florian Milde, 2014 .

Vortex particle-mesh methods with immersed lifting lines applied to the Large Eddy Simulation of wind turbine wakes

Laurent Bricteux, Petros Koumoutsakos, Grégoire Winckelmans, 2011 .

Hydrophobic hydration of C60 and carbon nanotubes in water

Petros Koumoutsakos, Jens Honore Walther, T. Werder, 2004 .

Water–Carbon Interactions 2: Calibration of Potentials using Contact Angle Data for Different Interaction Models

Petros Koumoutsakos, Pedro Gonnet, Jens Honore Walther, 2004 .

Barriers to superfast water transport in carbon nanotube membranes.

Petros Koumoutsakos, Constantine M. Megaridis, Konstantinos Ritos, 2013, Nano letters.

On the generation of vorticity at a free surface

Petros Koumoutsakos, Thomas S. Lundgren, P. Koumoutsakos, 1997, Journal of Fluid Mechanics.

Optimization of Anguilliform Swimming

Petros Koumoutsakos, P. Koumoutsakos, Stefan Kern, 2006 .

Molecular Dynamics Simulation of Contact Angles of Water Droplets in Carbon Nanotubes

Petros Koumoutsakos, Jens Honore Walther, Flavio Noca, 2001 .

Dispersion corrections to density functionals for water aromatic interactions.

Petros Koumoutsakos, Michele Parrinello, Urs Zimmerli, 2004, The Journal of chemical physics.

Direct numerical simulations of vortex rings at ReΓ = 7500

Michael Bergdorf, Petros Koumoutsakos, Anthony Leonard, 2007, Journal of Fluid Mechanics.

Optimal aeroacoustic shape design using approximation modeling

Petros Koumoutsakos, Alison L. Marsden, Meng Wang, 2022 .

Simulations of electrophoretic RNA transport through transmembrane carbon nanotubes.

Petros Koumoutsakos, Urs Zimmerli, P. Koumoutsakos, 2008, Biophysical journal.

Dynamic particle ordering in oscillatory inertial microfluidics

Petros Koumoutsakos, Mehmet Toner, Jon F. Edd, 2019, Microfluidics and Nanofluidics.

Control algorithm for multiscale flow simulations of water.

Petros Koumoutsakos, Efthimios Kaxiras, P. Koumoutsakos, 2009, Physical review. E, Statistical, nonlinear, and soft matter physics.

Inviscid Axisymmetrization of an Elliptical Vortex

Petros Koumoutsakos, P. Koumoutsakos, 1997 .

A cutoff phenomenon in accelerated stochastic simulations of chemical kinetics via flow averaging (FLAVOR-SSA).

Houman Owhadi, Petros Koumoutsakos, Basil Bayati, 2010, The Journal of chemical physics.

Nanoparticle traffic on helical tracks: thermophoretic mass transport through carbon nanotubes.

Petros Koumoutsakos, Dimos Poulikakos, P. Koumoutsakos, 2006, Nano letters.

A theoretical prediction of friction drag reduction in turbulent flow by superhydrophobic surfaces

Petros Koumoutsakos, Koji Fukagata, Nobuhide Kasagi, 2006 .

Accelerated endothelial wound healing on microstructured substrates under flow.

Vartan Kurtcuoglu, Petros Koumoutsakos, Dimos Poulikakos, 2013, Biomaterials.

Numerical simulation of chemically-reacting shear layers via three-dimensional fast particle methods

Petros Koumoutsakos, Grégoire Winckelmans, Anthony Leonard, 1994 .

C-start: optimal start of larval fish

Petros Koumoutsakos, Mattia Gazzola, P. Koumoutsakos, 2012, Journal of Fluid Mechanics.

Flow past an Impulsively Started Cylinder

Petros Koumoutsakos, Anthony Leonard, P. Koumoutsakos, 1995 .

Antagonistic growth regulation by Dpp and Fat drives uniform cell proliferation.

Petros Koumoutsakos, Konrad Basler, Gerardo Tauriello, 2011, Developmental cell.

Single-particle tracking of murine polyoma virus-like particles on live cells and artificial membranes.

Petros Koumoutsakos, Ivo F Sbalzarini, Ari Helenius, 2005, Proceedings of the National Academy of Sciences of the United States of America.

Multiscale Modelling and Simulation

Sabine Attinger, Petros Koumoutsakos, 2004 .

Nanotube-based Sensors and Systems for Outer Planetary Exploration

Michael E. Hoenk, Petros Koumoutsakos, Jimmy Xu, 2001 .

An exact accelerated stochastic simulation algorithm.

Petros Koumoutsakos, Eric Mjolsness, Philippe Chatelain, 2009, The Journal of chemical physics.

Billion vortex particle direct numerical simulations of aircraft wakes

Alessandro Curioni, Diego Rossinelli, Michael Bergdorf, 2008 .

Water-Carbon Interactions: Potential Energy Calibration Using Experimental Data

Petros Koumoutsakos, Jens Honore Walther, T. Werder, 2003 .

Direct numerical simulations of unsteady separated flows using vortex methods

Petros Koumoutsakos, P. Koumoutsakos, 1993 .