Saliya Ekanayake

发表

Anatomy of machine learning algorithm implementations in MPI, Spark, and Flink

Geoffrey C. Fox, Supun Kamburugamuve, Pulasthi Wickramasinghe, 2018, Int. J. High Perform. Comput. Appl..

Towards a Comprehensive Set of Big Data Benchmarks

Geoffrey C. Fox, Judy Qiu, Shantenu Jha, 2014, High Performance Computing Workshop.

Performance of Windows Multicore Systems on Threading and MPI

Geoffrey C. Fox, Judy Qiu, Saliya Ekanayake, 2010, 2010 10th IEEE/ACM International Conference on Cluster, Cloud and Grid Computing.

High Performance Processing of Streaming Data

Geoffrey C. Fox, Milinda Pathirage, Supun Kamburugamuve, 2015, HiPC 2015.

SPIDAL Java: high performance data analytics with Java and MPI on large multicore HPC clusters

Geoffrey C. Fox, Supun Kamburugamuve, Saliya Ekanayake, 2016, SpringSim.

Big Data, Simulations and HPC Convergence

Geoffrey C. Fox, Judy Qiu, Shantenu Jha, 2015, WBDB.

Visualizing the Protein Sequence Universe

Geoffrey C. Fox, Judy Qiu, Yang Ruan, 2012, ECMLS '12.

Data Intensive Computing for Bioinformatics

Geoffrey C. Fox, Judy Qiu, Thilina Gunarathne, 2013 .

TSmap3D: Browser visualization of high dimensional time series data

Geoffrey C. Fox, Milinda Pathirage, Supun Kamburugamuve, 2016, 2016 IEEE International Conference on Big Data (Big Data).

Towards a systematic study of big data performance and benchmarking

Saliya Ekanayake, S. Ekanayake, 2016 .

DACIDR: deterministic annealed clustering with interpolative dimension reduction using a large collection of 16S rRNA sequences

Geoffrey C. Fox, Judy Qiu, Haixu Tang, 2012, BCB '12.

Evaluation of Java Message Passing in High Performance Data Analytics

Geoffrey C. Fox, Saliya Ekanayake, 2014 .

MIDAS: Multilinear detection at scale

Anil Vullikanti, Jose Cadena, Saliya Ekanayake, 2019, J. Parallel Distributed Comput..

Interpolative multidimensional scaling techniques for the identification of clusters in very large sequence sets

Geoffrey C. Fox, Judy Qiu, Qunfeng Dong, 2012, BMC Bioinformatics.

Fast graph scan statistics optimization using algebraic fingerprints

Anil Vullikanti, Jose Cadena, Saliya Ekanayake, 2017, 2017 IEEE International Conference on Big Data (Big Data).

Towards High Performance Processing of Streaming Data in Large Data Centers

Geoffrey C. Fox, Milinda Pathirage, Supun Kamburugamuve, 2016, 2016 IEEE International Parallel and Distributed Processing Symposium Workshops (IPDPSW).

MIDAS: Multilinear Detection at Scale

Anil Vullikanti, Jose Cadena, Saliya Ekanayake, 2018, 2018 IEEE International Parallel and Distributed Processing Symposium (IPDPS).

The Matrix: An Agent-Based Modeling Framework for Data Intensive Simulations

Samarth Swarup, Don Morrison, Christian Lebiere, 2019, AAMAS.

MIDAS: Multilinear Detection at Scale

Anil Vullikanti, Jose Cadena, Saliya Ekanayake, 2018 .

Visualizing the Protein Sequence Universe

Geoffrey C. Fox, Judy Qiu, Eugene Kolker, 2014, Concurr. Comput. Pract. Exp..

Hybrid cloud and cluster computing paradigms for life science applications

Geoffrey C. Fox, Hui Li, Tak-Lon Wu, 2010, BMC Bioinformatics.

Java thread and process performance for parallel machine learning on multicore HPC clusters

Geoffrey C. Fox, Supun Kamburugamuve, Pulasthi Wickramasinghe, 2016, 2016 IEEE International Conference on Big Data (Big Data).

Integration of Clustering and Multidimensional Scaling to Determine Phylogenetic Trees as Spherical Phylograms Visualized in 3 Dimensions

Geoffrey C. Fox, Haixu Tang, Yang Ruan, 2014, 2014 14th IEEE/ACM International Symposium on Cluster, Cloud and Grid Computing.

Parallel Algorithms for Densest Subgraph Discovery Using Shared Memory Model pdf

Anil Vullikanti, Indika Perera, Saliya Ekanayake, 2021, ArXiv.

Survey on High Productivity Computing Systems ( HPCS ) Languages [ Internal Report ]

Saliya Ekanayake, 2012 .

Phylogenetically Structured Differences in rRNA Gene Sequence Variation among Species of Arbuscular Mycorrhizal Fungi and Their Implications for Sequence Clustering

Yuzhen Ye, Saliya Ekanayake, James D. Bever, 2016, Applied and Environmental Microbiology.