Philippe E. Thomas

发表

Extended Feature Set for Chemical Named Entity Recognition and Indexing

U. Leser, T. Rocktäschel, Torsten Huber, 2013 .

Comparing semantically enriched experimental protein networks in colorectal cancer

U. Leser, M. Bux, Philippe E. Thomas, 2011 .

Comprehensive Benchmark of Gene Ontology Concept Recognition tools

U. Leser, Philippe E. Thomas, C. Jacob, 2013 .

GeneView – Gene-Centric Ranking of Biomedical Text

Philippe E. Thomas, 2010 .

Cross-lingual Approaches for the Detection of Adverse Drug Reactions in German from a Patient’s Perspective

Pierre Zweigenbaum, Roland Roller, Philippe E. Thomas, 2022, LREC.

A detailed error analysis of 13 kernel methods for protein–protein interaction extraction

U. Leser, D. Tikk, Philippe E. Thomas, 2013, BMC Bioinformatics.

Common Round: Application of Language Technologies to Large-Scale Web Debates

Josef van Genabith, Georg Heigold, He Wang, 2017, EACL.

A Comprehensive Benchmark of Kernel Methods to Extract Protein–Protein Interactions from Literature

Ulf Leser, Jörg Hakenberg, Domonkos Tikk, 2010, PLoS Comput. Biol..

Classical Hodgkin’s lymphoma shows epigenetic features of abortive plasma cell differentiation

Ulf Leser, Michael Hummel, Dido Lenze, 2011, Haematologica.

Ras-Mediated Deregulation of the Circadian Clock in Cancer

Ulf Leser, Hanspeter Herzel, Philippe Thomas, 2014, PLoS genetics.

Robust relationship extraction in the biomedical domain

Philippe Thomas, Philippe E. Thomas, 2015 .

SETH detects and normalizes genetic variants in text

Ulf Leser, Jörg Hakenberg, Tim Rocktäschel, 2016, Bioinform..

A detailed error analysis of 13 kernel methods for protein–protein interaction extraction

Ulf Leser, Domonkos Tikk, Philippe Thomas, 2013, BMC Bioinformatics.

Relation Extraction for Drug-Drug Interactions using Ensemble Learning

Ulf Leser, Philippe Thomas, Domonkos Tikk, 2011 .

Open Peer Review Invited Referee Responses

Karin M. Verspoor, Karin Verspoor, Philippe Thomas, 2022 .

Computer-assisted curation of a human regulatory core network from the biological literature

Bertram Klinger, Nils Blüthgen, Ulf Leser, 2015, Bioinform..

PubMedPortable: A Framework for Supporting the Development of Text Mining Applications

Philippe Thomas, Stefan Günther, Björn A. Grüning, 2016, PloS one.

Assembly of a Comprehensive Regulatory Network for the Mammalian Circadian Clock: A Bioinformatics Approach

Ulf Leser, Hanspeter Herzel, Philippe Thomas, 2015, PloS one.

MobASA: Corpus for Aspect-based Sentiment Analysis and Social Inclusion in the Mobility Domain

Aleksandra Gabryszak, Philippe E. Thomas, 2022, CSRNLP.

Automated recognition of functional compound-protein relationships in literature

Philippe Thomas, Kersten Döring, Kiran K. Telukunta, 2019, bioRxiv.

GeneView: a comprehensive semantic search engine for PubMed

Ulf Leser, Johannes Starlinger, Philippe Thomas, 2012, Nucleic Acids Res..

BioCreative III interactive task: an overview

Zhiyong Lu, Fabio Rinaldi, Simon Clematide, 2011, BMC Bioinformatics.

WBI-DDI: Drug-Drug Interaction Extraction using Majority Voting

Mariana L. Neves, Ulf Leser, Tim Rocktäschel, 2013, *SEMEVAL.

Not all links are equal: Exploiting Dependency Types for the Extraction of Protein-Protein Interactions from Text

Ulf Leser, Domonkos Tikk, Philippe Thomas, 2011, BioNLP@ACL.

Findings of the WMT 2017 Biomedical Translation Shared Task

Karin M. Verspoor, Mariana L. Neves, Madeleine Kittner, 2017, WMT.

Improving Distantly Supervised Extraction of Drug-Drug and Protein-Protein Interactions

Martin Hofmann-Apitius, Philippe Thomas, Roman Klinger, 2012 .

Learning Protein–Protein Interaction Extraction using Distant Supervision

Ulf Leser, Philippe Thomas, Roman Klinger, 2011 .

Experiences from Developing the Domain-Specific Entity Search Engine GeneView

Ulf Leser, Johannes Starlinger, Philippe Thomas, 2013, BTW.

Learning to Extract Protein-Protein Interactions using Distant Supervision

Ulf Leser, Philippe Thomas, Roman Klinger, 2011 .

Challenges in the association of human single nucleotide polymorphism mentions with unique database identifiers

Laura Inés Furlong, Martin Hofmann-Apitius, Christoph M. Friedrich, 2011, BMC Bioinformatics.

Twitter Geolocation Prediction Using Neural Networks

Philippe Thomas, Leonhard Hennig, Philippe E. Thomas, 2017, GSCL.

Football and Beer - a Social Media Analysis on Twitter in Context of the FIFA Football World Cup 2018 pdf

Sven Schmeier, Philippe Thomas, Roland Roller, 2018, EMNLP 2018.

Integrating 400 million variants from 80,000 human samples with extensive annotations: towards a knowledge base to analyze disease cohorts

Rong Chen, Jörg Hakenberg, Philippe Thomas, 2016, BMC Bioinformatics.

EMNLP 2017 Second Conference on Machine Translation (WMT 17)

Karin M. Verspoor, Madeleine Kittner, Rudolf Rosa, 2017 .

Computer-assisted curation of a human regulatory core network from the biological literature

U. Leser, D. Tikk, N. Blüthgen, 2015, Bioinform..

Detecting Named Entities and Relations in German Clinical Reports

Hans Uszkoreit, Philippe Thomas, Roland Roller, 2017, GSCL.

GeneView – Gene-Centric Ranking of Biomedical Text

Philippe E. Thomas, 2010 .

Classical Hodgkin’s lymphoma shows epigenetic features of abortive plasma cell differentiation

U. Leser, H. Stein, D. Lenze, 2011, Haematologica.

Automated recognition of functional compound-protein relationships in literature

Philippe Thomas, Stefan Günther, Pankaj Mishra, 2020, PloS one.

Findings of the WMT 2022 Biomedical Translation Shared Task: Monolingual Clinical Case Reports

Giorgio Maria Di Nunzio, C. Grozea, Martin Krallinger, 2022, WMT.

Findings of the WMT 2021 Biomedical Translation Shared Task: Summaries of Animal Experiments as New Test Set

Maite Oronoz, Amy Siu, Aurélie Névéol, 2021, WMT.

Findings of the WMT 2020 Biomedical Translation Shared Task: Basque, Italian and Russian as New Additional Languages

Maite Oronoz, Amy Siu, Rachel Bawden, 2020, WMT.