Rafael C. Jimenez

发表

iAnn: an event sharing platform for the life sciences

Ping Yu, Federico Morán, Celia W. G. van Gelder, 2013, Bioinform..

easyDAS: Automatic creation of DAS servers

Andrew M. Jenkinson, Rafael C. Jimenez, Henning Hermjakob, 2010, BMC Bioinformatics.

10 Simple rules for design, provision, and reuse of identifiers for web-based life science data

María Martín, Michel Dumontier, Carole Goble, 2015 .

BioJS: an open source JavaScript framework for biological data visualization

Maria Jesus Martin, Alexander García Castro, Rafael C. Jimenez, 2013, Bioinform..

PIsCO: A Performance indicators framework for collection of bioinformatics resource metrics

John M. Hancock, Rafael C. Jimenez, Manuel Corpas, 2017, PeerJ Prepr..

BioCIDER: a Contextualisation InDEx for biological Resources discovery

John M. Hancock, Rafael C. Jimenez, Michelle D. Brazas, 2016, Bioinform..

The IntAct molecular interaction database in 2012

Rafael C. Jimenez, Henning Hermjakob, Carol Chen, 2011, Nucleic Acids Res..

Best practices in bioinformatics training for life scientists

Federico Morán, Celia W. G. van Gelder, Rafael C. Jimenez, 2013, Briefings Bioinform..

Integrating biological data – the Distributed Annotation System

Hagen Blankenburg, Robert D. Finn, Andreas Prlic, 2008, BMC Bioinformatics.

BioMedBridges: A prototype federated query interface for information on biosamples, and linking of biosamples and disease terminology to genome

Petr Holub, Morris A. Swertz, Rafael C. Jimenez, 2016 .

Community Organizations: Changing the Culture in Which Research Software Is Developed and Sustained

Nancy Wilkins-Diehr, David E. Bernholdt, Sandra Gesing, 2018, Computing in Science & Engineering.

Dasty3, a WEB framework for DAS

Maria Jesus Martin, Alexander García Castro, Rafael C. Jimenez, 2011, Bioinform..

ELIXIR Europe on the road to sustainable research software

Mateusz Kuzak, Rafael C. Jimenez, Allegra Via, 2019 .

Merging and scoring molecular interactions utilising existing community standards: tools, use-cases and a case study

Rafael C. Jimenez, Henning Hermjakob, Jose M. Villaveces, 2015, Database J. Biol. Databases Curation.

BioContainers: an open-source and community-driven framework for software standardization

Harald Barsnes, Johannes Griss, Rafael C. Jimenez, 2017, Bioinform..

The Protein Feature Ontology: a tool for the unification of protein feature annotations

Andreas Prlic, Karen Eilbeck, Claire O'Donovan, 2008, Bioinform..

Data integration in biological research: an overview

Rafael C. Jimenez, Allegra Via, Maria Victoria Schneider, 2015, Journal of Biological Research-Thessaloniki.

OntoDas – a tool for facilitating the construction of complex queries to the Gene Ontology

Alexander García Castro, Rafael C. Jimenez, Henning Hermjakob, 2008, BMC Bioinformatics.

Lesson Development for Open Source Software Best Practices Adoption

Mateusz Kuzak, Rafael C. Jimenez, Allegra Via, 2018, 2018 IEEE 14th International Conference on e-Science (e-Science).

Bioinformatics Training Network (BTN): a community resource for bioinformatics trainers

Celia W. G. van Gelder, Rafael C. Jimenez, Marie-Claude Blatter, 2011, Briefings Bioinform..

The MIntAct project—IntAct as a common curation platform for 11 molecular interaction databases

Rafael C. Jimenez, Henning Hermjakob, Carol Chen, 2013, Nucleic Acids Res..

Teaching the Fundamentals of Biological Data Integration Using Classroom Games

Rafael C. Jimenez, Maria Victoria Schneider, R. Jimenez, 2012, PLoS Comput. Biol..

REPORT: BioMedBridges workshop on e-Infrastructure support for the life sciences – Preparing for the data deluge

Chris Morris, Rafael C. Jimenez, Guy Cochrane, 2015 .

A new reference implementation of the PSICQUIC web service

Johannes Goll, Rafael C. Jimenez, Henning Hermjakob, 2013, Nucleic Acids Res..

The GOBLET training portal: a global repository of bioinformatics training materials, courses and trainers

Celia W. G. van Gelder, Mick Watson, Rafael C. Jimenez, 2015, Bioinform..

10 Simple rules for design, provision, and reuse of persistent identifiers for life science data

María Martín, Michel Dumontier, Carole Goble, 2015 .

DAS Writeback: A Collaborative Annotation System

Edwin H. Blake, Alexander García Castro, Rafael C. Jimenez, 2011, BMC Bioinformatics.

Dasty2, an Ajax protein DAS client

Alexander García Castro, Rafael C. Jimenez, Henning Hermjakob, 2008, Bioinform..

Data integration in biological research: an

Rafael C. Jimenez, Allegra Via, Maria Victoria Schneider, 2015 .

Tools and data services registry: a community effort to document bioinformatics resources

Silvio C. E. Tosatto, Anthony Bretaudeau, Burkhard Rost, 2015, Nucleic Acids Res..

A global perspective on bioinformatics training needs

Tin Wee Tan, Rafael C. Jimenez, Michelle D. Brazas, 2017 .

myKaryoView: A Light-Weight Client for Visualization of Genomic Data

Rafael C. Jimenez, Gustavo A. Salazar, Manuel Corpas, 2011, PloS one.

KEGGViewer, a BioJS component to visualize KEGG Pathways

Rafael C. Jimenez, Jose M. Villaveces, Bianca H. Habermann, 2014, F1000Research.

Using community events to increase quality and adoption of standards: the case of Bioschemas

Silvio C. E. Tosatto, Graziano Pesole, Rafael C. Jimenez, 2018 .

Top 10 metrics for life science software good practices

Rafael C. Jimenez, Pedro L. Fernandes, Manuel Corpas, 2016, F1000Research.