Andreas Keller

发表

IMOTA: an interactive multi-omics tissue atlas for the analysis of human miRNA–target interactions

Christina Backes, Eckart Meese, Andreas Keller, 2017, Nucleic Acids Res..

A minimally invasive multiple marker approach allows highly efficient detection of meningioma tumors

Eckart Meese, Andreas Keller, Hans-Peter Lenhof, 2006, BMC Bioinformatics.

Computation of significance scores of unweighted Gene Set Enrichment Analyses

Christina Backes, Andreas Keller, Hans-Peter Lenhof, 2007, BMC Bioinformatics.

Videodensitometrische und Videotopometrische Messungen in Röntgenbildern

Andreas Keller, Thomas Baehring, H. Krause, 1996, Bildverarbeitung für die Medizin.

LitDB - Keeping Track of Research Papers From Your Institute Made Simple

Andreas Keller, Lars Kraemer, Jörn Bethune, 2017, Source Code for Biology and Medicine.

Regulatory MicroRNA Networks: Complex Patterns of Target Pathways for Disease-related and Housekeeping MicroRNAs

Christina Backes, Eckart Meese, Andreas Keller, 2015, Genom. Proteom. Bioinform..

The German-Russian entrepreneur Andreas Knauf: apractical man in the Urals

Andreas Keller, 2014 .

BusyBee Web: metagenomic data analysis by bootstrapped supervised binning and annotation

Christina Backes, Andreas Keller, Tobias Fehlmann, 2017, Nucleic Acids Res..

REGGAE: a novel approach for the identification of key transcriptional regulators

Eckart Meese, Andreas Keller, Hans-Peter Lenhof, 2018, Bioinform..

miRCarta: a central repository for collecting miRNA candidates

Christina Backes, Eckart Meese, Andreas Keller, 2017, Nucleic Acids Res..

Genome-wide MicroRNA Expression Profiles in COPD: Early Predictors for Cancer Development

Christina Backes, Eckart Meese, Andreas Keller, 2018, Genom. Proteom. Bioinform..

DynaVenn: web-based computation of the most significant overlap between ordered sets

Christina Backes, Andreas Keller, Tobias Fehlmann, 2019, BMC Bioinformatics.

A novel algorithm for detecting differentially regulated paths based on gene set enrichment analysis

Christina Backes, Eckart Meese, Andreas Keller, 2009, Bioinform..

miEAA: microRNA enrichment analysis and annotation

Christina Backes, Eckart Meese, Andreas Keller, 2016, Nucleic Acids Res..

NetworkTrail - a web service for identifying and visualizing deregulated subnetworks

Christina Backes, Andreas Keller, Michael Kaufmann, 2013, Bioinform..

A review of databases predicting the effects of SNPs in miRNA genes or miRNA-binding sites

Christina Backes, Andreas Keller, Shashwat Sahay, 2019, Briefings Bioinform..

ClinOmicsTrailbc: a visual analytics tool for breast cancer treatment stratification

Christina Backes, Eckart Meese, Andreas Keller, 2019, Bioinform..

EDISON-WMW: Exact Dynamic Programing Solution of the Wilcoxon–Mann–Whitney Test

Christina Backes, Eckart Meese, Andreas Keller, 2016, Genom. Proteom. Bioinform..

What's the target: understanding two decades of in silico microRNA-target prediction

Christina Backes, Eckart Meese, Andreas Keller, 2019, Briefings Bioinform..

Machine Learning to Detect Alzheimer’s Disease from Circulating Non-coding RNAs

Christina Backes, Eckart Meese, Andreas Keller, 2019, Genom. Proteom. Bioinform..

Integrating Culture-based Antibiotic Resistance Profiles with Whole-genome Sequencing Data for 11,087 Clinical Isolates

Christina Backes, Eckart Meese, Andreas Keller, 2019, Genom. Proteom. Bioinform..

SePaCS—a web-based application for classification of seroreactivity profiles

Eckart Meese, Andreas Keller, Hans-Peter Lenhof, 2007, Nucleic Acids Res..

Computational Cardiology — A New Discipline of Translational Research

Hugo A. Katus, Benjamin Meder, Andreas Keller, 2016, Genom. Proteom. Bioinform..

Whole miRNome-wide Differential Co-expression of MicroRNAs

Christina Backes, Benjamin Meder, Eckart Meese, 2012, Genom. Proteom. Bioinform..

Lexicon-free handwritten word spotting using character HMMs

Andreas Keller, Volkmar Frinken, Horst Bunke, 2012, Pattern Recognit. Lett..

BALL-SNPgp - from genetic variants toward computational diagnostics

Sabine C. Mueller, Christina Backes, Eckart Meese, 2016, Bioinform..

Der deutsch-russische Unternehmer Andreas Knauf im Ural Der Аufstieg

Andreas Keller, 2013 .

miRNA assays in the clinical laboratory: workflow, detection technologies and automation aspects

Andreas Keller, Andreas Kappel, A. Keller, 2017, Clinical chemistry and laboratory medicine.

Privacy in Epigenetics: Temporal Linkability of MicroRNA Expression Profiles

Andreas Keller, Michael Backes, Mathias Humbert, 2016, USENIX Security Symposium.

Large-scale antibody profiling of human blood sera: The future of molecular diagnosis

Eckart Meese, Andreas Keller, Joachim Weickert, 2009, Informatik-Spektrum.

miRPathDB: a new dictionary on microRNAs and target pathways

Christina Backes, Eckart Meese, Andreas Keller, 2016, Nucleic Acids Res..

Multi-omics enrichment analysis using the GeneTrail2 web service

Christina Backes, Eckart Meese, Andreas Keller, 2016, Bioinform..

Finite Element Approximation with Hierarchical B-Splines

Andreas Keller, Klaus Höllig, Jörg Hörner, 2014, Curves and Surfaces.

GeneTrail—advanced gene set enrichment analysis

Christina Backes, Eckart Meese, Andreas Keller, 2007, Nucleic Acids Res..

miEAA 2.0: integrating multi-species microRNA enrichment analysis and workflow management systems

Christina Backes, Eckart Meese, Andreas Keller, 2020, bioRxiv.

The Role of Quality Control in Targeted Next-generation Sequencing Library Preparation

Jan Haas, Benjamin Meder, Andreas Keller, 2016, Genom. Proteom. Bioinform..

Assessing the heterogeneity of in silico plasmid predictions based on whole-genome-sequenced clinical isolates

Andreas Keller, Cedric C Laczny, Andreas E. Posch, 2019, Briefings Bioinform..

PLSDB: a resource of complete bacterial plasmids

Christina Backes, Andreas Keller, Tobias Fehlmann, 2018, Nucleic Acids Res..

miRTrail - a comprehensive webserver for analyzing gene and miRNA patterns to enhance the understanding of regulatory mechanisms in diseases

Christina Backes, Jan Haas, Hugo A. Katus, 2012, BMC Bioinformatics.

HMM-based Word Spotting in Handwritten Documents Using Subword Models

Andreas Keller, Volkmar Frinken, Horst Bunke, 2010, 2010 20th International Conference on Pattern Recognition.

StructMAn: annotation of single-nucleotide polymorphisms in the structural context

Andreas Keller, Joachim Büch, Alexander Greß, 2016, Nucleic Acids Res..

Toward an early diagnosis of lung cancer: An autoantibody signature for squamous cell lung carcinoma

Eckart Meese, Andreas Keller, Hans-Peter Lenhof, 2008, International journal of cancer.

Transcriptome analysis by GeneTrail revealed regulation of functional categories in response to alterations of iron homeostasis in Arabidopsis thaliana

Christina Backes, Andreas Keller, Hans-Peter Lenhof, 2011, BMC Plant Biology.

Toward the blood-borne miRNome of human diseases

Christina Backes, Benjamin Meder, Eckart Meese, 2011, Nature Methods.

A genome-wide association study identifies 6p21 as novel risk locus for dilated cardiomyopathy.

Benjamin Meder, Andreas Keller, Thomas Meitinger, 2014, European heart journal.

High-throughput miRNA profiling of human melanoma blood samples

Eckart Meese, Andreas Keller, Hans-Peter Lenhof, 2010, BMC Cancer.

miRTargetLink—miRNAs, Genes and Interaction Networks

Christina Backes, Benjamin Meder, Eckart Meese, 2016, International journal of molecular sciences.

Population Genomic Analysis of Ancient and Modern Genomes Yields New Insights into the Genetic Ancestry of the Tyrolean Iceman and the Genetic Structure of Europe

Andreas Keller, Martin Sikora, Carlo Sidore, 2014, PLoS genetics.

Complex humoral immune response against a benign tumor: frequent antibody response against specific antigens as diagnostic targets.

Christina Backes, Eckart Meese, Andreas Keller, 2005, Proceedings of the National Academy of Sciences of the United States of America.

Influence of next-generation sequencing and storage conditions on miRNA patterns generated from PAXgene blood.

Sabine C. Mueller, Christina Backes, Benjamin Meder, 2015, Analytical chemistry.

A comprehensive, cell specific microRNA catalogue of human peripheral blood

Andreas Keller, Martin Hofmann-Apitius, Philip Rosenstiel, 2017, Nucleic acids research.

miFRame: analysis and visualization of miRNA sequencing data in neurological disorders

Christina Backes, Benjamin Meder, Eckart Meese, 2015, Journal of Translational Medicine.

A specific miRNA signature in the peripheral blood of glioblastoma patients

Andreas Keller, Patrick Roth, Silvia Hofer, 2011, Journal of neurochemistry.

Treatment-independent miRNA signature in blood of wilms tumor patients

Christina Backes, Eckart Meese, Andreas Keller, 2012, BMC Genomics.

Specific peripheral miRNA profiles for distinguishing lung cancer from COPD.

Eckart Meese, Andreas Keller, Hans-Peter Lenhof, 2011, Lung cancer.

The miRNome of Alzheimer's disease: consistent downregulation of the miR-132/212 cluster

Eckart Meese, Andreas Keller, Harald Hampel, 2017, Neurobiology of Aging.

Towards Clinical Applications of Blood-Borne miRNA Signatures: The Influence of the Anticoagulant EDTA on miRNA Abundance

Christina Backes, Eckart Meese, Andreas Keller, 2015, PloS one.

MicroRNA in vitro diagnostics using immunoassay analyzers.

Christina Backes, Benjamin Meder, Eckart Meese, 2015, Clinical chemistry.

Evaluating the Use of Circulating MicroRNA Profiles for Lung Cancer Detection in Symptomatic Patients.

Christina Backes, Benjamin Meder, Eckart Meese, 2020, JAMA oncology.

miRNAs can be generally associated with human pathologies as exemplified for miR-144*

Sabine C. Mueller, Christina Backes, Benjamin Meder, 2014, BMC Medicine.

Targeted Next-Generation Sequencing for the Molecular Genetic Diagnostics of Cardiomyopathies

Hugo A. Katus, Benjamin Meder, Andreas Keller, 2011, Circulation. Cardiovascular genetics.

Alterations in cardiac DNA methylation in human dilated cardiomyopathy

Benjamin Meder, Andreas Keller, Karen S. Frese, 2013, EMBO molecular medicine.

Differentially regulated miRNAs as prognostic biomarkers in the blood of primary CNS lymphoma patients.

Christina Backes, Eckart Meese, Andreas Keller, 2015, European journal of cancer.

Deep characterization of blood cell miRNomes by NGS

Christina Backes, Benjamin Meder, Eckart Meese, 2016, Cellular and Molecular Life Sciences.

Machine Learning to Detect Alzheimer’s Disease from Circulating Non-coding RNAs

Christina Backes, Eckart Meese, Andreas Keller, 2019, bioRxiv.

A novel whole-blood miRNA signature for a rapid diagnosis of pulmonary tuberculosis

Christina Backes, Eckart Meese, Andreas Keller, 2015, European Respiratory Journal.

Influence of the confounding factors age and sex on microRNA profiles from peripheral blood.

Christina Backes, Benjamin Meder, Eckart Meese, 2014, Clinical chemistry.

MicroRNA signatures in total peripheral blood as novel biomarkers for acute myocardial infarction

Hugo A. Katus, Benjamin Meder, Eckart Meese, 2010, Basic Research in Cardiology.

Combining miRNA and mRNA Expression Profiles in Wilms Tumor Subtypes

Christina Backes, Eckart Meese, Andreas Keller, 2016, International journal of molecular sciences.

Comprehensive analysis of microRNA profiles in multiple sclerosis including next-generation sequencing

Christina Backes, Benjamin Meder, Eckart Meese, 2014, Multiple sclerosis.

Undulating changes in human plasma proteome profiles across the lifespan

Andreas Keller, Claudio Franceschi, Benoit Lehallier, 2019, Nature Medicine.

Immunogenicity of autoantigens

Christina Backes, Eckart Meese, Andreas Keller, 2011, BMC Genomics.

A dictionary on microRNAs and their putative target pathways

Christina Backes, Eckart Meese, Andreas Keller, 2010, Nucleic acids research.

MicroRNAs – Important Molecules in Lung Cancer Research

Eckart Meese, Andreas Keller, Petra Leidinger, 2011, Front. Gene..

What makes a blood cell based miRNA expression pattern disease specific? - A miRNome analysis of blood cell subsets in lung cancer patients and healthy controls

Christina Backes, Eckart Meese, Andreas Keller, 2014, Oncotarget.

Double-Stranded Ligation Assay for the Rapid Multiplex Quantification of MicroRNAs.

Benjamin Meder, Andreas Keller, Hugo A Katus, 2015, Analytical chemistry.

Blood Born miRNAs Signatures that Can Serve as Disease Specific Biomarkers Are Not Significantly Affected by Overall Fitness and Exercise

Christina Backes, Eckart Meese, Andreas Keller, 2014, PloS one.

An integer linear programming approach for finding deregulated subgraphs in regulatory networks

Christina Backes, Eckart Meese, Andreas Keller, 2011, Nucleic acids research.

Bias in High-Throughput Analysis of miRNAs and Implications for Biomarker Studies.

Christina Backes, Benjamin Meder, Eckart Meese, 2016, Analytical chemistry.

DrugTargetInspector: An assistance tool for patient treatment stratification

Eckart Meese, Andreas Keller, Hans-Peter Lenhof, 2016, International journal of cancer.

An estimate of the total number of true human miRNAs

Christina Backes, Eckart Meese, Andreas Keller, 2019, Nucleic acids research.

Bias in recent miRBase annotations potentially associated with RNA quality issues

Eckart Meese, Andreas Keller, Nicole Ludwig, 2017, Scientific Reports.

From Single Variants to Protein Cascades

Sabine C. Mueller, Christina Backes, Benjamin Meder, 2015, The Journal of Biological Chemistry.

The human miRNA repertoire of different blood compounds

Christina Backes, Benjamin Meder, Eckart Meese, 2014, BMC Genomics.

Longitudinal study on circulating miRNAs in patients after lung cancer resection

Christina Backes, Eckart Meese, Andreas Keller, 2015, Oncotarget.

High-throughput qRT-PCR validation of blood microRNAs in non-small cell lung cancer

Christina Backes, Eckart Meese, Andreas Keller, 2015, Oncotarget.

Can circulating miRNAs live up to the promise of being minimal invasive biomarkers in clinical settings?

Eckart Meese, Andreas Keller, A. Keller, 2016, Wiley interdisciplinary reviews. RNA.

Severe COVID-19 Is Marked by a Dysregulated Myeloid Cell Compartment

Alexander Sczyrba, Andreas Keller, Christian Drosten, 2020, Cell.

miRNAs in lung cancer - Studying complex fingerprints in patient's blood cells by microarray experiments

Eckart Meese, Andreas Keller, Hans-Peter Lenhof, 2009, BMC Cancer.

Identification of lung cancer with high sensitivity and specificity by blood testing

Eckart Meese, Andreas Keller, Hans-Peter Lenhof, 2010, Respiratory research.

MicroRNA expression profiles in human testicular tissues of infertile men with different histopathologic patterns.

Christina Backes, Eckart Meese, Andreas Keller, 2014, Fertility and sterility.

MicroRNAs Targeting Oncogenes Are Down-Regulated in Pancreatic Malignant Transformation from Benign Tumors

Andreas Keller, Georgios Giamas, Long R. Jiao, 2012, PloS one.

From next-generation sequencing alignments to accurate comparison and validation of single-nucleotide variants: the pibase software

Andreas Keller, Philip Rosenstiel, Andre Franke, 2012, Nucleic acids research.

New insights into the genetics of glioblastoma multiforme by familial exome sequencing

Sabine C. Mueller, Christina Backes, Hugo A. Katus, 2014, Oncotarget.

miRNAs and sports: tracking training status and potentially confounding diagnoses

Christina Backes, Benjamin Meder, Eckart Meese, 2016, Journal of Translational Medicine.

Deep-learning based detection of gastric precancerous conditions

Andreas Keller, Tobias Fehlmann, Markus Casper, 2019, Gut.

Mutations in the SIX1/2 pathway and the DROSHA/DGCR8 miRNA microprocessor complex underlie high-risk blastemal type Wilms tumors.

Eckart Meese, Andreas Keller, Roland Eils, 2015, Cancer cell.

Stable serum miRNA profiles as potential tool for non-invasive lung cancer diagnosis

Eckart Meese, Andreas Keller, Hans-Peter Lenhof, 2011, RNA biology.

Swarm Learning for decentralized and confidential clinical machine learning

Andreas Keller, Saikat Mukherjee, Matthias Becker, 2021, Nature.

Pattern of Serum Autoantibodies Allows Accurate Distinction between a Tumor and Pathologies of the Same Organ

Eckart Meese, Andreas Keller, Hans-Peter Lenhof, 2008, Clinical Cancer Research.

BALL-SNP: combining genetic and structural information to identify candidate non-synonymous single nucleotide polymorphisms

Christina Backes, Benjamin Meder, Eckart Meese, 2015, Genome Medicine.