Saber Hafezqorani

发表

Predicting clinical outcomes in neuroblastoma with genomic data integration

H. Kazan, D. A. Acar, Tunde W. Aderinwale, 2018, Biology Direct.

RBPSponge: genome-wide identification of lncRNAs that sponge RBPs

H. Kazan, Saber Hafezqorani, Aissa Houdjedj, 2019, bioRxiv.

Reference-free assembly of long-read transcriptome sequencing data with RNA-Bloom2

I. Birol, Readman Chiu, R. Warren, 2022, bioRxiv.

Modeling the combined effect of RNA-binding proteins and microRNAs in post-transcriptional regulation

Hilal Kazan, Y. A. Son, Atefeh Lafzi, 2016, Nucleic acids research.

Trans-NanoSim characterizes and simulates nanopore RNA-sequencing data

Inanc Birol, Theodora Lo, Ka Ming Nip, 2020, GigaScience.

Characterization and simulation of metagenomic nanopore sequencing data with Meta-NanoSim

I. Birol, R. Warren, K. Nip, 2021, bioRxiv.

RNA-Scoop: interactive visualization of transcripts in single-cell transcriptomes

I. Birol, R. Warren, K. Nip, 2021, NAR genomics and bioinformatics.

Trans-NanoSim characterizes and simulates nanopore RNA-seq data

René L. Warren, Inanc Birol, Ka Ming Nip, 2019, bioRxiv.

Systematic assessment of long-read RNA-seq methods for transcript identification and quantification

Jonathan M. Mudge, Angela N. Brooks, Gloria M. Sheynkman, 2023, bioRxiv.